RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 RRP7AQ9Y3A4 280 aaKnown RBP25.56■■□□□ 1.68
RCCD1-201ENST00000394258 QRICH2Q9H0J4 1663 aa25.56■■□□□ 1.68
RCCD1-201ENST00000394258 NEO1Q92859 1461 aa25.56■■□□□ 1.68
RCCD1-201ENST00000394258 CAMSAP1Q5T5Y3 1602 aa25.55■■□□□ 1.68
RCCD1-201ENST00000394258 ANO8Q9HCE9 1232 aaPredicted RBP25.55■■□□□ 1.68
RCCD1-201ENST00000394258 TRMT2AQ8IZ69 625 aaKnown RBP25.55■■□□□ 1.68
RCCD1-201ENST00000394258 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.53■■□□□ 1.68
RCCD1-201ENST00000394258 MTHFSP49914 203 aa25.53■■□□□ 1.68
RCCD1-201ENST00000394258 MS4A1P11836 297 aa25.52■■□□□ 1.68
RCCD1-201ENST00000394258 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
RCCD1-201ENST00000394258 EVC2Q86UK5 1308 aa25.52■■□□□ 1.68
RCCD1-201ENST00000394258 POLR3AO14802 1390 aaPredicted RBP25.52■■□□□ 1.68
RCCD1-201ENST00000394258 E9PSI1 815 aa25.51■■□□□ 1.67
RCCD1-201ENST00000394258 WWC1Q8IX03 1113 aa25.5■■□□□ 1.67
RCCD1-201ENST00000394258 CGNL1Q0VF96 1302 aa25.5■■□□□ 1.67
RCCD1-201ENST00000394258 FBXO31Q5XUX0 539 aaPredicted RBP25.5■■□□□ 1.67
RCCD1-201ENST00000394258 KDM2BQ8NHM5 1336 aa25.49■■□□□ 1.67
RCCD1-201ENST00000394258 NKTRP30414 1462 aaKnown RBP25.49■■□□□ 1.67
RCCD1-201ENST00000394258 GLI2P10070 1586 aa25.48■■□□□ 1.67
RCCD1-201ENST00000394258 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
RCCD1-201ENST00000394258 NEXMIFQ5QGS0 1516 aa25.46■■□□□ 1.67
RCCD1-201ENST00000394258 ZC3H13Q5T200 1668 aaKnown RBP25.46■■□□□ 1.67
RCCD1-201ENST00000394258 TCP11L2Q8N4U5 519 aa25.46■■□□□ 1.67
RCCD1-201ENST00000394258 SLC52A1Q9NWF4 448 aa25.45■■□□□ 1.66
RCCD1-201ENST00000394258 MINK1Q8N4C8 1332 aaPredicted RBP25.44■■□□□ 1.66
RCCD1-201ENST00000394258 FAM69CQ0P6D2 419 aa25.43■■□□□ 1.66
RCCD1-201ENST00000394258 RUNDC1Q96C34 613 aa25.43■■□□□ 1.66
RCCD1-201ENST00000394258 PIK3C2BO00750 1634 aa25.43■■□□□ 1.66
RCCD1-201ENST00000394258 RTN4Q9NQC3 1192 aaKnown RBP25.42■■□□□ 1.66
RCCD1-201ENST00000394258 RICTORQ6R327 1708 aa25.42■■□□□ 1.66
RCCD1-201ENST00000394258 TULP4Q9NRJ4 1543 aa25.42■■□□□ 1.66
RCCD1-201ENST00000394258 CENPQQ7L2Z9 268 aaPredicted RBP25.41■■□□□ 1.66
RCCD1-201ENST00000394258 CFAP53Q96M91 514 aa25.41■■□□□ 1.66
RCCD1-201ENST00000394258 STAG3Q9UJ98 1225 aa25.4■■□□□ 1.66
RCCD1-201ENST00000394258 ARHGAP31Q2M1Z3 1444 aa25.4■■□□□ 1.66
RCCD1-201ENST00000394258 U2AF1L5P0DN76 240 aaPredicted RBP25.4■■□□□ 1.66
RCCD1-201ENST00000394258 CANXP27824 592 aaKnown RBP25.4■■□□□ 1.66
RCCD1-201ENST00000394258 U2AF1Q01081 240 aaKnown RBP eCLIP25.4■■□□□ 1.664e-12■■□□□ 12.7
RCCD1-201ENST00000394258 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
RCCD1-201ENST00000394258 GGNBP2Q9H3C7 697 aa25.4■■□□□ 1.66
RCCD1-201ENST00000394258 POGKQ9P215 609 aa25.4■■□□□ 1.66
RCCD1-201ENST00000394258 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
RCCD1-201ENST00000394258 ANKRD36BQ8N2N9 1353 aa25.39■■□□□ 1.66
RCCD1-201ENST00000394258 ARHGEF28Q8N1W1 1705 aaKnown RBP25.39■■□□□ 1.66
RCCD1-201ENST00000394258 RTL5Q5HYW3 569 aaPredicted RBP25.39■■□□□ 1.65
RCCD1-201ENST00000394258 NGEFQ8N5V2 710 aa25.39■■□□□ 1.65
RCCD1-201ENST00000394258 FRAT1Q92837 279 aaPredicted RBP25.39■■□□□ 1.65
RCCD1-201ENST00000394258 IL27Q8NEV9 243 aa25.38■■□□□ 1.65
RCCD1-201ENST00000394258 MYO5BQ9ULV0 1848 aa25.37■■□□□ 1.65
RCCD1-201ENST00000394258 RGS3P49796 1198 aa25.37■■□□□ 1.65
RCCD1-201ENST00000394258 PANK1Q8TE04 598 aa25.37■■□□□ 1.65
RCCD1-201ENST00000394258 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
RCCD1-201ENST00000394258 BCL2L13Q9BXK5 485 aa25.35■■□□□ 1.65
RCCD1-201ENST00000394258 COG6Q9Y2V7 657 aa25.35■■□□□ 1.65
RCCD1-201ENST00000394258 MLECQ14165 292 aa25.34■■□□□ 1.65
RCCD1-201ENST00000394258 A0A1W2PP64 1363 aa25.34■■□□□ 1.65
RCCD1-201ENST00000394258 PUS7Q96PZ0 661 aaKnown RBP25.33■■□□□ 1.65
RCCD1-201ENST00000394258 U2SURPO15042 1029 aaKnown RBP25.32■■□□□ 1.64
RCCD1-201ENST00000394258 IGHDP01880 384 aa25.3■■□□□ 1.64
RCCD1-201ENST00000394258 SLC4A3P48751 1232 aa25.29■■□□□ 1.64
RCCD1-201ENST00000394258 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
RCCD1-201ENST00000394258 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
RCCD1-201ENST00000394258 TNNQ9UQP3 1299 aa25.28■■□□□ 1.64
RCCD1-201ENST00000394258 TMEM131LA2VDJ0 1609 aa25.28■■□□□ 1.64
RCCD1-201ENST00000394258 RARSP54136 660 aaKnown RBP25.28■■□□□ 1.64
RCCD1-201ENST00000394258 C8orf34Q49A92 452 aa25.28■■□□□ 1.64
RCCD1-201ENST00000394258 YTHDC2Q9H6S0 1430 aaKnown RBP25.27■■□□□ 1.64
RCCD1-201ENST00000394258 TSPOAP1O95153 1857 aa25.27■■□□□ 1.64
RCCD1-201ENST00000394258 FYB1O15117 783 aa25.27■■□□□ 1.64
RCCD1-201ENST00000394258 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
RCCD1-201ENST00000394258 PDE3AQ14432 1141 aa25.26■■□□□ 1.63
RCCD1-201ENST00000394258 WDR63Q8IWG1 891 aa25.26■■□□□ 1.63
RCCD1-201ENST00000394258 CDK19Q9BWU1 502 aa25.26■■□□□ 1.63
RCCD1-201ENST00000394258 NSD2O96028 1365 aa25.26■■□□□ 1.63
RCCD1-201ENST00000394258 USP32Q8NFA0 1604 aa25.26■■□□□ 1.63
RCCD1-201ENST00000394258 TERF2IPQ9NYB0 399 aa25.26■■□□□ 1.63
RCCD1-201ENST00000394258 PTPRMP28827 1452 aa25.25■■□□□ 1.63
RCCD1-201ENST00000394258 IQSEC2Q5JU85 1478 aa25.25■■□□□ 1.63
RCCD1-201ENST00000394258 CLUAP1Q96AJ1 413 aa25.25■■□□□ 1.63
RCCD1-201ENST00000394258 CABP1Q9NZU7 370 aa25.25■■□□□ 1.63
RCCD1-201ENST00000394258 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
RCCD1-201ENST00000394258 FAM161AQ3B820 660 aa25.24■■□□□ 1.63
RCCD1-201ENST00000394258 WAPLQ7Z5K2 1190 aa25.24■■□□□ 1.63
RCCD1-201ENST00000394258 RLBP1P12271 317 aa25.22■■□□□ 1.63
RCCD1-201ENST00000394258 FBLN1P23142 703 aa25.22■■□□□ 1.63
RCCD1-201ENST00000394258 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
RCCD1-201ENST00000394258 ATAD2Q6PL18 1390 aa25.21■■□□□ 1.63
RCCD1-201ENST00000394258 NEFMP07197 916 aa25.21■■□□□ 1.63
RCCD1-201ENST00000394258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.21■■□□□ 1.63
RCCD1-201ENST00000394258 PPM1GO15355 546 aaPredicted RBP25.2■■□□□ 1.62
RCCD1-201ENST00000394258 CCDC27Q2M243 656 aa25.2■■□□□ 1.62
RCCD1-201ENST00000394258 HDGFL2Q7Z4V5 671 aaPredicted RBP25.19■■□□□ 1.62
RCCD1-201ENST00000394258 MYH16Q9H6N6 1097 aa25.18■■□□□ 1.62
RCCD1-201ENST00000394258 ALKQ9UM73 1620 aa25.17■■□□□ 1.62
RCCD1-201ENST00000394258 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.17■■□□□ 1.62
RCCD1-201ENST00000394258 NINLQ9Y2I6 1382 aa25.17■■□□□ 1.62
RCCD1-201ENST00000394258 DDRGK1Q96HY6 314 aa25.17■■□□□ 1.62
RCCD1-201ENST00000394258 CD163L1Q9NR16 1453 aa25.16■■□□□ 1.62
RCCD1-201ENST00000394258 MAPK8IP3Q9UPT6 1336 aa25.15■■□□□ 1.62
RCCD1-201ENST00000394258 TMPOP42166 694 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms