RNA–Protein interactions for RNA: ENST00000393416.6

MDM2-212, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-212ENST00000393416 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
MDM2-212ENST00000393416 GPATCH8Q9UKJ3 1502 aaKnown RBP11.32□□□□□ -0.6
MDM2-212ENST00000393416 SLC26A8Q96RN1 970 aa11.32□□□□□ -0.6
MDM2-212ENST00000393416 EID1Q9Y6B2 187 aa11.32□□□□□ -0.6
MDM2-212ENST00000393416 MYOM3Q5VTT5 1437 aa11.32□□□□□ -0.6
MDM2-212ENST00000393416 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
MDM2-212ENST00000393416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
MDM2-212ENST00000393416 PLEKHH2Q8IVE3 1493 aa11.31□□□□□ -0.6
MDM2-212ENST00000393416 TET3O43151 1660 aa11.3□□□□□ -0.6
MDM2-212ENST00000393416 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
MDM2-212ENST00000393416 RRBP1Q9P2E9 1410 aaKnown RBP11.3□□□□□ -0.6
MDM2-212ENST00000393416 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
MDM2-212ENST00000393416 ATRNO75882 1429 aa11.29□□□□□ -0.6
MDM2-212ENST00000393416 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
MDM2-212ENST00000393416 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
MDM2-212ENST00000393416 FAM212AQ96EL1 285 aa11.28□□□□□ -0.6
MDM2-212ENST00000393416 RYDENQ9NUL5 291 aaKnown RBP11.28□□□□□ -0.6
MDM2-212ENST00000393416 USP21Q9UK80 565 aa11.28□□□□□ -0.6
MDM2-212ENST00000393416 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
MDM2-212ENST00000393416 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
MDM2-212ENST00000393416 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
MDM2-212ENST00000393416 C1QTNF8P60827 252 aa11.27□□□□□ -0.61
MDM2-212ENST00000393416 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
MDM2-212ENST00000393416 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
MDM2-212ENST00000393416 CFAP65Q6ZU64 1925 aaKnown RBP11.27□□□□□ -0.61
MDM2-212ENST00000393416 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.61
MDM2-212ENST00000393416 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
MDM2-212ENST00000393416 CAMSAP2Q08AD1 1489 aa11.26□□□□□ -0.61
MDM2-212ENST00000393416 ZNF784Q8NCA9 323 aaPredicted RBP11.26□□□□□ -0.61
MDM2-212ENST00000393416 ASXL1Q8IXJ9 1541 aa11.25□□□□□ -0.61
MDM2-212ENST00000393416 PIK3C2BO00750 1634 aa11.25□□□□□ -0.61
MDM2-212ENST00000393416 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
MDM2-212ENST00000393416 MROH1Q8NDA8 1641 aa11.24□□□□□ -0.61
MDM2-212ENST00000393416 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
MDM2-212ENST00000393416 UNC13BO14795 1591 aa11.24□□□□□ -0.61
MDM2-212ENST00000393416 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
MDM2-212ENST00000393416 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
MDM2-212ENST00000393416 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
MDM2-212ENST00000393416 LRRC59Q96AG4 307 aaKnown RBP11.22□□□□□ -0.61
MDM2-212ENST00000393416 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
MDM2-212ENST00000393416 ACIN1Q9UKV3 1341 aaKnown RBP11.22□□□□□ -0.61
MDM2-212ENST00000393416 NCOA3Q9Y6Q9 1424 aa11.22□□□□□ -0.61
MDM2-212ENST00000393416 ATF3P18847 181 aa11.21□□□□□ -0.61
MDM2-212ENST00000393416 R3HDM1Q15032 1099 aaKnown RBP11.21□□□□□ -0.61
MDM2-212ENST00000393416 FNBP4Q8N3X1 1017 aaPredicted RBP11.21□□□□□ -0.61
MDM2-212ENST00000393416 CEP350Q5VT06 3117 aa11.21□□□□□ -0.62
MDM2-212ENST00000393416 CEP152O94986 1710 aa11.21□□□□□ -0.62
MDM2-212ENST00000393416 PPARGC1BQ86YN6 1023 aaKnown RBP11.2□□□□□ -0.62
MDM2-212ENST00000393416 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
MDM2-212ENST00000393416 BRWD3Q6RI45 1802 aa11.2□□□□□ -0.62
MDM2-212ENST00000393416 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
MDM2-212ENST00000393416 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
MDM2-212ENST00000393416 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
MDM2-212ENST00000393416 SPHKAPQ2M3C7 1700 aa11.18□□□□□ -0.62
MDM2-212ENST00000393416 CAMTA1Q9Y6Y1 1673 aa11.18□□□□□ -0.62
MDM2-212ENST00000393416 PYGBP11216 843 aa11.18□□□□□ -0.62
MDM2-212ENST00000393416 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
MDM2-212ENST00000393416 DDX17Q92841 729 aaKnown RBP11.18□□□□□ -0.62
MDM2-212ENST00000393416 C19orf44Q9H6X5 657 aa11.18□□□□□ -0.62
MDM2-212ENST00000393416 ROCK1Q13464 1354 aa11.17□□□□□ -0.62
MDM2-212ENST00000393416 ARHGEF5Q12774 1597 aa11.17□□□□□ -0.62
MDM2-212ENST00000393416 TSPY4P0CV99 314 aa11.17□□□□□ -0.62
MDM2-212ENST00000393416 TSPY10P0CW01 314 aa11.17□□□□□ -0.62
MDM2-212ENST00000393416 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
MDM2-212ENST00000393416 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
MDM2-212ENST00000393416 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
MDM2-212ENST00000393416 GJD4Q96KN9 370 aaPredicted RBP11.16□□□□□ -0.62
MDM2-212ENST00000393416 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
MDM2-212ENST00000393416 GLI3P10071 1580 aa11.16□□□□□ -0.62
MDM2-212ENST00000393416 BAG6P46379 1132 aa11.15□□□□□ -0.62
MDM2-212ENST00000393416 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
MDM2-212ENST00000393416 ABCC5O15440 1437 aa11.14□□□□□ -0.63
MDM2-212ENST00000393416 MST1RQ04912 1400 aa11.14□□□□□ -0.63
MDM2-212ENST00000393416 DAPK1P53355 1430 aa11.13□□□□□ -0.63
MDM2-212ENST00000393416 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
MDM2-212ENST00000393416 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
MDM2-212ENST00000393416 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
MDM2-212ENST00000393416 ADGRL2O95490 1459 aa11.12□□□□□ -0.63
MDM2-212ENST00000393416 DCCP43146 1447 aa11.11□□□□□ -0.63
MDM2-212ENST00000393416 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.11□□□□□ -0.63
MDM2-212ENST00000393416 ARHGAP31Q2M1Z3 1444 aa11.1□□□□□ -0.63
MDM2-212ENST00000393416 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
MDM2-212ENST00000393416 ANKRD30AQ9BXX3 1397 aa11.1□□□□□ -0.63
MDM2-212ENST00000393416 NINLQ9Y2I6 1382 aa11.1□□□□□ -0.63
MDM2-212ENST00000393416 ADGRB3O60242 1522 aa11.09□□□□□ -0.63
MDM2-212ENST00000393416 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
MDM2-212ENST00000393416 SLC34A2O95436 690 aa11.09□□□□□ -0.63
MDM2-212ENST00000393416 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
MDM2-212ENST00000393416 COL22A1Q8NFW1 1626 aaPredicted RBP11.09□□□□□ -0.63
MDM2-212ENST00000393416 EIF2AK4Q9P2K8 1649 aaKnown RBP11.09□□□□□ -0.63
MDM2-212ENST00000393416 HFM1A2PYH4 1435 aa11.09□□□□□ -0.63
MDM2-212ENST00000393416 IDI1Q13907 227 aa11.08□□□□□ -0.64
MDM2-212ENST00000393416 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
MDM2-212ENST00000393416 PPP1R1BQ9UD71 204 aaPredicted RBP11.08□□□□□ -0.64
MDM2-212ENST00000393416 UTRNP46939 3433 aa11.07□□□□□ -0.64
MDM2-212ENST00000393416 MYOM2P54296 1465 aa11.06□□□□□ -0.64
MDM2-212ENST00000393416 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
MDM2-212ENST00000393416 RGPD1P0DJD0 1748 aa11.06□□□□□ -0.64
MDM2-212ENST00000393416 LAMC1P11047 1609 aa11.06□□□□□ -0.64
MDM2-212ENST00000393416 GIGYF1O75420 1035 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms