RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 ZMYM4Q5VZL5 1548 aa19.53■□□□□ 0.72
SHTN1-204ENST00000392903 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
SHTN1-204ENST00000392903 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
SHTN1-204ENST00000392903 ADGRB1O14514 1584 aa19.52■□□□□ 0.72
SHTN1-204ENST00000392903 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
SHTN1-204ENST00000392903 FBXO31Q5XUX0 539 aaPredicted RBP19.51■□□□□ 0.71
SHTN1-204ENST00000392903 STK26Q9P289 416 aa19.51■□□□□ 0.71
SHTN1-204ENST00000392903 DAXXQ9UER7 740 aaPredicted RBP19.5■□□□□ 0.71
SHTN1-204ENST00000392903 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
SHTN1-204ENST00000392903 RSPH6AQ9H0K4 717 aa19.49■□□□□ 0.71
SHTN1-204ENST00000392903 FAM43AQ8N2R8 423 aa19.49■□□□□ 0.71
SHTN1-204ENST00000392903 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
SHTN1-204ENST00000392903 APAF1O14727 1248 aa19.48■□□□□ 0.71
SHTN1-204ENST00000392903 KDM2BQ8NHM5 1336 aa19.48■□□□□ 0.71
SHTN1-204ENST00000392903 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
SHTN1-204ENST00000392903 PIK3C2BO00750 1634 aa19.48■□□□□ 0.71
SHTN1-204ENST00000392903 NSD3Q9BZ95 1437 aa19.47■□□□□ 0.71
SHTN1-204ENST00000392903 EIF5BO60841 1220 aaKnown RBP19.47■□□□□ 0.71
SHTN1-204ENST00000392903 SLC52A1Q9NWF4 448 aa19.47■□□□□ 0.71
SHTN1-204ENST00000392903 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
SHTN1-204ENST00000392903 SLC4A3P48751 1232 aa19.46■□□□□ 0.71
SHTN1-204ENST00000392903 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
SHTN1-204ENST00000392903 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
SHTN1-204ENST00000392903 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
SHTN1-204ENST00000392903 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
SHTN1-204ENST00000392903 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
SHTN1-204ENST00000392903 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
SHTN1-204ENST00000392903 GLI2P10070 1586 aa19.44■□□□□ 0.7
SHTN1-204ENST00000392903 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
SHTN1-204ENST00000392903 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
SHTN1-204ENST00000392903 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
SHTN1-204ENST00000392903 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
SHTN1-204ENST00000392903 ZNF521Q96K83 1311 aa19.43■□□□□ 0.7
SHTN1-204ENST00000392903 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
SHTN1-204ENST00000392903 ZC3H13Q5T200 1668 aaKnown RBP19.43■□□□□ 0.7
SHTN1-204ENST00000392903 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
SHTN1-204ENST00000392903 CENPQQ7L2Z9 268 aaPredicted RBP19.43■□□□□ 0.7
SHTN1-204ENST00000392903 C20orf194Q5TEA3 1177 aa19.42■□□□□ 0.7
SHTN1-204ENST00000392903 SPINK5Q9NQ38 1064 aaPredicted RBP19.42■□□□□ 0.7
SHTN1-204ENST00000392903 MLECQ14165 292 aa19.41■□□□□ 0.7
SHTN1-204ENST00000392903 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
SHTN1-204ENST00000392903 STAG3Q9UJ98 1225 aa19.41■□□□□ 0.7
SHTN1-204ENST00000392903 FRAT2O75474 233 aaPredicted RBP19.4■□□□□ 0.7
SHTN1-204ENST00000392903 SLFN5Q08AF3 891 aa19.39■□□□□ 0.69
SHTN1-204ENST00000392903 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
SHTN1-204ENST00000392903 ARHGEF28Q8N1W1 1705 aaKnown RBP19.38■□□□□ 0.69
SHTN1-204ENST00000392903 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
SHTN1-204ENST00000392903 DIP2BQ9P265 1576 aa19.38■□□□□ 0.69
SHTN1-204ENST00000392903 CGNL1Q0VF96 1302 aa19.38■□□□□ 0.69
SHTN1-204ENST00000392903 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
SHTN1-204ENST00000392903 MTHFSP49914 203 aa19.37■□□□□ 0.69
SHTN1-204ENST00000392903 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
SHTN1-204ENST00000392903 TULP4Q9NRJ4 1543 aa19.37■□□□□ 0.69
SHTN1-204ENST00000392903 MINK1Q8N4C8 1332 aaPredicted RBP19.37■□□□□ 0.69
SHTN1-204ENST00000392903 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
SHTN1-204ENST00000392903 POLR3AO14802 1390 aaPredicted RBP19.36■□□□□ 0.69
SHTN1-204ENST00000392903 PRAM1Q96QH2 718 aa19.35■□□□□ 0.69
SHTN1-204ENST00000392903 POGKQ9P215 609 aa19.35■□□□□ 0.69
SHTN1-204ENST00000392903 ZFYVE9O95405 1425 aa19.34■□□□□ 0.69
SHTN1-204ENST00000392903 RRP7AQ9Y3A4 280 aaKnown RBP19.34■□□□□ 0.69
SHTN1-204ENST00000392903 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
SHTN1-204ENST00000392903 ANKRD36BQ8N2N9 1353 aa19.32■□□□□ 0.68
SHTN1-204ENST00000392903 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
SHTN1-204ENST00000392903 WWC1Q8IX03 1113 aa19.3■□□□□ 0.68
SHTN1-204ENST00000392903 BCAR3O75815 825 aa19.3■□□□□ 0.68
SHTN1-204ENST00000392903 VIRMAQ69YN4 1812 aaKnown RBP19.3■□□□□ 0.68
SHTN1-204ENST00000392903 E9PSI1 815 aa19.29■□□□□ 0.68
SHTN1-204ENST00000392903 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
SHTN1-204ENST00000392903 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
SHTN1-204ENST00000392903 A0A1W2PP64 1363 aa19.28■□□□□ 0.68
SHTN1-204ENST00000392903 TCP11L2Q8N4U5 519 aa19.27■□□□□ 0.68
SHTN1-204ENST00000392903 CFAP53Q96M91 514 aa19.27■□□□□ 0.68
SHTN1-204ENST00000392903 PTPRMP28827 1452 aa19.27■□□□□ 0.68
SHTN1-204ENST00000392903 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.68
SHTN1-204ENST00000392903 RUNDC1Q96C34 613 aa19.27■□□□□ 0.68
SHTN1-204ENST00000392903 SHPRHQ149N8 1683 aa19.27■□□□□ 0.67
SHTN1-204ENST00000392903 NKTRP30414 1462 aaKnown RBP19.27■□□□□ 0.67
SHTN1-204ENST00000392903 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.26■□□□□ 0.67
SHTN1-204ENST00000392903 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
SHTN1-204ENST00000392903 U2AF1L5P0DN76 240 aaPredicted RBP19.25■□□□□ 0.67
SHTN1-204ENST00000392903 U2AF1Q01081 240 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHTN1-204ENST00000392903 CDK19Q9BWU1 502 aa19.25■□□□□ 0.67
SHTN1-204ENST00000392903 ALKQ9UM73 1620 aa19.24■□□□□ 0.67
SHTN1-204ENST00000392903 USP32Q8NFA0 1604 aa19.24■□□□□ 0.67
SHTN1-204ENST00000392903 NGEFQ8N5V2 710 aa19.23■□□□□ 0.67
SHTN1-204ENST00000392903 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
SHTN1-204ENST00000392903 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
SHTN1-204ENST00000392903 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
SHTN1-204ENST00000392903 FYB1O15117 783 aa19.22■□□□□ 0.67
SHTN1-204ENST00000392903 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
SHTN1-204ENST00000392903 ESF1Q9H501 851 aaKnown RBP19.22■□□□□ 0.67
SHTN1-204ENST00000392903 RGS3P49796 1198 aa19.21■□□□□ 0.67
SHTN1-204ENST00000392903 NSD2O96028 1365 aa19.21■□□□□ 0.67
SHTN1-204ENST00000392903 AGLP35573 1532 aa19.21■□□□□ 0.67
SHTN1-204ENST00000392903 USP19O94966 1318 aa19.21■□□□□ 0.66
SHTN1-204ENST00000392903 ABCC11Q96J66 1382 aa19.2■□□□□ 0.66
SHTN1-204ENST00000392903 A2ML1A8K2U0 1454 aa19.2■□□□□ 0.66
SHTN1-204ENST00000392903 RRAGDQ9NQL2 400 aaPredicted RBP19.2■□□□□ 0.66
SHTN1-204ENST00000392903 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
SHTN1-204ENST00000392903 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms