RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 NALCNQ8IZF0 1738 aa29.72■■■□□ 2.35
CDCA4-202ENST00000392590 CCER1Q8TC90 406 aaPredicted RBP29.71■■■□□ 2.35
CDCA4-202ENST00000392590 DLC1Q96QB1 1528 aa29.71■■■□□ 2.35
CDCA4-202ENST00000392590 MST1RQ04912 1400 aa29.7■■■□□ 2.34
CDCA4-202ENST00000392590 KIAA1210Q9ULL0 1709 aa29.68■■■□□ 2.34
CDCA4-202ENST00000392590 NBPF8Q3BBV2 869 aa29.67■■■□□ 2.34
CDCA4-202ENST00000392590 ROBO1Q9Y6N7 1651 aa29.67■■■□□ 2.34
CDCA4-202ENST00000392590 BRINP3Q76B58 766 aa29.66■■■□□ 2.34
CDCA4-202ENST00000392590 C1orf167Q5SNV9 1468 aa29.63■■■□□ 2.33
CDCA4-202ENST00000392590 CDC42BPGQ6DT37 1551 aa29.62■■■□□ 2.33
CDCA4-202ENST00000392590 ROCK2O75116 1388 aaKnown RBP29.62■■■□□ 2.33
CDCA4-202ENST00000392590 NUTM2FA1L443 756 aa29.61■■■□□ 2.33
CDCA4-202ENST00000392590 MINK1Q8N4C8 1332 aaPredicted RBP29.6■■■□□ 2.33
CDCA4-202ENST00000392590 ORAI2Q96SN7 254 aa29.6■■■□□ 2.33
CDCA4-202ENST00000392590 HIRIP3Q9BW71 556 aaPredicted RBP29.59■■■□□ 2.33
CDCA4-202ENST00000392590 TIMELESSQ9UNS1 1208 aa29.59■■■□□ 2.33
CDCA4-202ENST00000392590 ESCO1Q5FWF5 840 aa29.56■■■□□ 2.32
CDCA4-202ENST00000392590 TRPM1Q7Z4N2 1603 aa29.56■■■□□ 2.32
CDCA4-202ENST00000392590 CENPJQ9HC77 1338 aaPredicted RBP29.52■■■□□ 2.32
CDCA4-202ENST00000392590 ARHGEF28Q8N1W1 1705 aaKnown RBP29.51■■■□□ 2.32
CDCA4-202ENST00000392590 WASLO00401 505 aaPredicted RBP29.51■■■□□ 2.32
CDCA4-202ENST00000392590 CARD11Q9BXL7 1154 aa29.51■■■□□ 2.32
CDCA4-202ENST00000392590 GPRASP1Q5JY77 1395 aa29.51■■■□□ 2.31
CDCA4-202ENST00000392590 DDX17Q92841 729 aaKnown RBP29.5■■■□□ 2.31
CDCA4-202ENST00000392590 AHDC1Q5TGY3 1603 aaPredicted RBP29.48■■■□□ 2.31
CDCA4-202ENST00000392590 RALGAPBQ86X10 1494 aa29.47■■■□□ 2.31
CDCA4-202ENST00000392590 PHLPP1O60346 1717 aa29.47■■■□□ 2.31
CDCA4-202ENST00000392590 ADGRB2O60241 1585 aa29.47■■■□□ 2.31
CDCA4-202ENST00000392590 FMN2Q9NZ56 1722 aa29.46■■■□□ 2.31
CDCA4-202ENST00000392590 EIF3AQ14152 1382 aaKnown RBP29.45■■■□□ 2.31
CDCA4-202ENST00000392590 FOXO3O43524 673 aa29.44■■■□□ 2.3
CDCA4-202ENST00000392590 CDK19Q9BWU1 502 aa29.44■■■□□ 2.3
CDCA4-202ENST00000392590 LRRC59Q96AG4 307 aaKnown RBP29.43■■■□□ 2.3
CDCA4-202ENST00000392590 JCADQ9P266 1359 aa29.43■■■□□ 2.3
CDCA4-202ENST00000392590 ANKARQ7Z5J8 1434 aa29.43■■■□□ 2.3
CDCA4-202ENST00000392590 NPHP3Q7Z494 1330 aa29.42■■■□□ 2.3
CDCA4-202ENST00000392590 PHF8Q9UPP1 1060 aa29.42■■■□□ 2.3
CDCA4-202ENST00000392590 COL16A1Q07092 1604 aaPredicted RBP29.41■■■□□ 2.3
CDCA4-202ENST00000392590 SOS2Q07890 1332 aaPredicted RBP29.4■■■□□ 2.3
CDCA4-202ENST00000392590 PRR36Q9H6K5 1346 aa29.39■■■□□ 2.3
CDCA4-202ENST00000392590 NHSL1Q5SYE7 1610 aa29.38■■■□□ 2.29
CDCA4-202ENST00000392590 NUDT16Q96DE0 195 aaKnown RBP29.38■■■□□ 2.29
CDCA4-202ENST00000392590 TULP4Q9NRJ4 1543 aa29.37■■■□□ 2.29
CDCA4-202ENST00000392590 PMFBP1Q8TBY8 1022 aa29.37■■■□□ 2.29
CDCA4-202ENST00000392590 XPCQ01831 940 aaPredicted RBP29.36■■■□□ 2.29
CDCA4-202ENST00000392590 SRPK2P78362 688 aaKnown RBP29.35■■■□□ 2.29
CDCA4-202ENST00000392590 EVC2Q86UK5 1308 aa29.32■■■□□ 2.28
CDCA4-202ENST00000392590 USP32Q8NFA0 1604 aa29.32■■■□□ 2.28
CDCA4-202ENST00000392590 KRT28Q7Z3Y7 464 aa29.32■■■□□ 2.28
CDCA4-202ENST00000392590 CABP2Q9NPB3 220 aa29.32■■■□□ 2.28
CDCA4-202ENST00000392590 PSME1Q06323 249 aa29.31■■■□□ 2.28
CDCA4-202ENST00000392590 CCDC61Q9Y6R9 512 aa29.31■■■□□ 2.28
CDCA4-202ENST00000392590 QRICH2Q9H0J4 1663 aa29.31■■■□□ 2.28
CDCA4-202ENST00000392590 SPATA31A6Q5VVP1 1343 aa29.3■■■□□ 2.28
CDCA4-202ENST00000392590 KIF1AQ12756 1690 aa29.29■■■□□ 2.28
CDCA4-202ENST00000392590 ATP7BP35670 1465 aa29.29■■■□□ 2.28
CDCA4-202ENST00000392590 DISP3Q9P2K9 1392 aa29.29■■■□□ 2.28
CDCA4-202ENST00000392590 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
CDCA4-202ENST00000392590 NGDNQ8NEJ9 315 aaKnown RBP29.29■■■□□ 2.28
CDCA4-202ENST00000392590 PXDNQ92626 1479 aa29.28■■■□□ 2.28
CDCA4-202ENST00000392590 MED1Q15648 1581 aaPredicted RBP29.27■■■□□ 2.28
CDCA4-202ENST00000392590 ST20-MTHFSA0A0A6YYL1 179 aa29.26■■■□□ 2.27
CDCA4-202ENST00000392590 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.27
CDCA4-202ENST00000392590 SBNO2Q9Y2G9 1366 aa29.25■■■□□ 2.27
CDCA4-202ENST00000392590 NUTM2BA6NNL0 878 aaPredicted RBP29.24■■■□□ 2.27
CDCA4-202ENST00000392590 NUTM2EB1AL46 878 aaPredicted RBP29.24■■■□□ 2.27
CDCA4-202ENST00000392590 NUTM2AQ8IVF1 878 aaPredicted RBP29.24■■■□□ 2.27
CDCA4-202ENST00000392590 PLEKHG3A1L390 1219 aa29.23■■■□□ 2.27
CDCA4-202ENST00000392590 PHF23Q9BUL5 403 aaPredicted RBP29.22■■■□□ 2.27
CDCA4-202ENST00000392590 SPATA31A3Q5VYP0 1347 aa29.22■■■□□ 2.27
CDCA4-202ENST00000392590 SHPRHQ149N8 1683 aa29.22■■■□□ 2.27
CDCA4-202ENST00000392590 USP47Q96K76 1375 aa29.21■■■□□ 2.27
CDCA4-202ENST00000392590 ACEP12821 1306 aa29.2■■■□□ 2.26
CDCA4-202ENST00000392590 SBNO1A3KN83 1393 aa29.19■■■□□ 2.26
CDCA4-202ENST00000392590 SLC24A1O60721 1099 aa29.19■■■□□ 2.26
CDCA4-202ENST00000392590 CABP1Q9NZU7 370 aa29.19■■■□□ 2.26
CDCA4-202ENST00000392590 PPIP5K1Q6PFW1 1433 aa29.18■■■□□ 2.26
CDCA4-202ENST00000392590 MEX3CQ5U5Q3 659 aaKnown RBP29.18■■■□□ 2.26
CDCA4-202ENST00000392590 TESK2Q96S53 571 aa29.18■■■□□ 2.26
CDCA4-202ENST00000392590 LMOD2Q6P5Q4 547 aa29.17■■■□□ 2.26
CDCA4-202ENST00000392590 POLR3AO14802 1390 aaPredicted RBP29.16■■■□□ 2.26
CDCA4-202ENST00000392590 LRP6O75581 1613 aa29.15■■■□□ 2.26
CDCA4-202ENST00000392590 ITSN1Q15811 1721 aa29.15■■■□□ 2.26
CDCA4-202ENST00000392590 TNS3Q68CZ2 1445 aa29.14■■■□□ 2.26
CDCA4-202ENST00000392590 PAK3O75914 559 aaPredicted RBP29.14■■■□□ 2.25
CDCA4-202ENST00000392590 ATAD2Q6PL18 1390 aa29.13■■■□□ 2.25
CDCA4-202ENST00000392590 TOPAZ1Q8N9V7 1692 aa29.12■■■□□ 2.25
CDCA4-202ENST00000392590 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
CDCA4-202ENST00000392590 PUS7Q96PZ0 661 aaKnown RBP29.1■■■□□ 2.25
CDCA4-202ENST00000392590 ARHGEF10O15013 1369 aa29.1■■■□□ 2.25
CDCA4-202ENST00000392590 TMF1P82094 1093 aa29.08■■■□□ 2.25
CDCA4-202ENST00000392590 PLEKHG5O94827 1062 aa29.07■■■□□ 2.24
CDCA4-202ENST00000392590 TMC1Q8TDI8 760 aa29.06■■■□□ 2.24
CDCA4-202ENST00000392590 RGS17Q9UGC6 210 aaPredicted RBP29.06■■■□□ 2.24
CDCA4-202ENST00000392590 COL22A1Q8NFW1 1626 aaPredicted RBP29.06■■■□□ 2.24
CDCA4-202ENST00000392590 EIF4G2P78344 907 aaKnown RBP eCLIP29.05■■■□□ 2.24
CDCA4-202ENST00000392590 HAP1P54257 671 aaPredicted RBP29.04■■■□□ 2.24
CDCA4-202ENST00000392590 CABLES1Q8TDN4 633 aa29.04■■■□□ 2.24
CDCA4-202ENST00000392590 C8orf37Q96NL8 207 aa29.04■■■□□ 2.24
CDCA4-202ENST00000392590 ZNF692Q9BU19 519 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms