RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 LUC7LQ9NQ29 371 aaKnown RBP21.38■■□□□ 1.01
SPTBN4-204ENST00000392025 CALCOCO1Q9P1Z2 691 aa21.38■■□□□ 1.01
SPTBN4-204ENST00000392025 ZBED9Q6R2W3 1325 aa21.37■■□□□ 1.01
SPTBN4-204ENST00000392025 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
SPTBN4-204ENST00000392025 VGFO15240 615 aaPredicted RBP21.36■■□□□ 1.01
SPTBN4-204ENST00000392025 NFXL1Q6ZNB6 911 aa21.36■■□□□ 1.01
SPTBN4-204ENST00000392025 NOL8Q76FK4 1167 aaKnown RBP21.36■■□□□ 1.01
SPTBN4-204ENST00000392025 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
SPTBN4-204ENST00000392025 HMGB2P26583 209 aaKnown RBP21.36■■□□□ 1.01
SPTBN4-204ENST00000392025 IFIT2P09913 472 aaKnown RBP21.35■■□□□ 1.01
SPTBN4-204ENST00000392025 CLASRPQ8N2M8 674 aaKnown RBP21.34■■□□□ 1.01
SPTBN4-204ENST00000392025 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
SPTBN4-204ENST00000392025 HSP90AB2PQ58FF8 381 aa21.34■■□□□ 1.01
SPTBN4-204ENST00000392025 CCAR1Q8IX12 1150 aaKnown RBP21.34■■□□□ 1.01
SPTBN4-204ENST00000392025 PSME1Q06323 249 aa21.33■■□□□ 1.01
SPTBN4-204ENST00000392025 ERC2O15083 957 aa21.33■■□□□ 1.01
SPTBN4-204ENST00000392025 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1.01
SPTBN4-204ENST00000392025 E9PSI1 815 aa21.33■■□□□ 1
SPTBN4-204ENST00000392025 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
SPTBN4-204ENST00000392025 PIP4K2AP48426 406 aaPredicted RBP21.32■■□□□ 1
SPTBN4-204ENST00000392025 FOXD4L5Q5VV16 416 aaPredicted RBP21.32■■□□□ 1
SPTBN4-204ENST00000392025 FOXD4L4Q8WXT5 416 aaPredicted RBP21.32■■□□□ 1
SPTBN4-204ENST00000392025 SLC3A2P08195 630 aaKnown RBP21.32■■□□□ 1
SPTBN4-204ENST00000392025 SEPT7Q16181 437 aaKnown RBP21.32■■□□□ 1
SPTBN4-204ENST00000392025 FBXW7Q969H0 707 aa21.31■■□□□ 1
SPTBN4-204ENST00000392025 G3BP1Q13283 466 aaKnown RBP eCLIP21.31■■□□□ 1
SPTBN4-204ENST00000392025 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
SPTBN4-204ENST00000392025 SPATA24Q86W54 205 aa21.3■■□□□ 1
SPTBN4-204ENST00000392025 OFD1O75665 1012 aa21.3■■□□□ 1
SPTBN4-204ENST00000392025 ZKSCAN2Q63HK3 967 aa21.3■■□□□ 1
SPTBN4-204ENST00000392025 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.3■■□□□ 1
SPTBN4-204ENST00000392025 NFKBIBQ15653 356 aa21.3■■□□□ 1
SPTBN4-204ENST00000392025 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
SPTBN4-204ENST00000392025 SLC26A8Q96RN1 970 aa21.29■■□□□ 1
SPTBN4-204ENST00000392025 SART3Q15020 963 aaKnown RBP21.28■■□□□ 1
SPTBN4-204ENST00000392025 CUX1P39880 1505 aa21.28■■□□□ 1
SPTBN4-204ENST00000392025 DDX19BQ9UMR2 479 aa21.28■■□□□ 1
SPTBN4-204ENST00000392025 GOLGA6L10A0A0M3HER8 536 aa21.28■■□□□ 1
SPTBN4-204ENST00000392025 SYTL4Q96C24 671 aaPredicted RBP21.28■■□□□ 1
SPTBN4-204ENST00000392025 WIZO95785 1651 aa21.28■■□□□ 1
SPTBN4-204ENST00000392025 CCDC112Q8NEF3 446 aa21.28■■□□□ 1
SPTBN4-204ENST00000392025 FBXO3Q9UK99 471 aa21.28■■□□□ 1
SPTBN4-204ENST00000392025 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
SPTBN4-204ENST00000392025 KIF2AO00139 706 aaPredicted RBP21.27■■□□□ 1
SPTBN4-204ENST00000392025 MCM2P49736 904 aa21.27■■□□□ 1
SPTBN4-204ENST00000392025 PDCP20941 246 aa21.27■■□□□ 1
SPTBN4-204ENST00000392025 ZFYVE27Q5T4F4 411 aa21.27■■□□□ 1
SPTBN4-204ENST00000392025 ANO2Q9NQ90 1003 aa21.27■□□□□ 0.99
SPTBN4-204ENST00000392025 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 FILIP1LQ4L180 1135 aa21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 PAF1Q8N7H5 531 aa21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 TRIM5Q9C035 493 aa21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 MCM3P25205 808 aa21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
SPTBN4-204ENST00000392025 TXLNAP40222 546 aa21.25■□□□□ 0.99
SPTBN4-204ENST00000392025 TSPY26PQ9H489 355 aa21.25■□□□□ 0.99
SPTBN4-204ENST00000392025 ATF3P18847 181 aa21.25■□□□□ 0.99
SPTBN4-204ENST00000392025 ENOX2Q16206 610 aaKnown RBP21.25■□□□□ 0.99
SPTBN4-204ENST00000392025 LRRCC1Q9C099 1032 aa21.25■□□□□ 0.99
SPTBN4-204ENST00000392025 TRIM21P19474 475 aaKnown RBP21.24■□□□□ 0.99
SPTBN4-204ENST00000392025 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
SPTBN4-204ENST00000392025 SYCP1Q15431 976 aa21.24■□□□□ 0.99
SPTBN4-204ENST00000392025 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
SPTBN4-204ENST00000392025 GBP3Q9H0R5 595 aa21.24■□□□□ 0.99
SPTBN4-204ENST00000392025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.24■□□□□ 0.99
SPTBN4-204ENST00000392025 POLR3GO15318 223 aaPredicted RBP21.23■□□□□ 0.99
SPTBN4-204ENST00000392025 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
SPTBN4-204ENST00000392025 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
SPTBN4-204ENST00000392025 UQCRHLA0A096LP55 91 aa21.23■□□□□ 0.99
SPTBN4-204ENST00000392025 UQCRHP07919 91 aa21.23■□□□□ 0.99
SPTBN4-204ENST00000392025 GBP2P32456 591 aaPredicted RBP21.22■□□□□ 0.99
SPTBN4-204ENST00000392025 KINO60870 393 aaKnown RBP21.22■□□□□ 0.99
SPTBN4-204ENST00000392025 SHTN1A0MZ66 631 aa21.22■□□□□ 0.99
SPTBN4-204ENST00000392025 MICALCLQ6ZW33 695 aa21.22■□□□□ 0.99
SPTBN4-204ENST00000392025 ZNHIT6Q9NWK9 470 aaKnown RBP21.22■□□□□ 0.99
SPTBN4-204ENST00000392025 TMEM132AQ24JP5 1023 aa21.22■□□□□ 0.99
SPTBN4-204ENST00000392025 PSMA5P28066 241 aa21.21■□□□□ 0.99
SPTBN4-204ENST00000392025 TRAK2O60296 914 aa21.21■□□□□ 0.99
SPTBN4-204ENST00000392025 DESP17661 470 aa21.21■□□□□ 0.99
SPTBN4-204ENST00000392025 MAP9Q49MG5 647 aa21.21■□□□□ 0.99
SPTBN4-204ENST00000392025 LUZP1Q86V48 1076 aa21.21■□□□□ 0.99
SPTBN4-204ENST00000392025 PDCL3Q9H2J4 239 aa21.21■□□□□ 0.99
SPTBN4-204ENST00000392025 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
SPTBN4-204ENST00000392025 API5Q9BZZ5 524 aaKnown RBP21.2■□□□□ 0.98
SPTBN4-204ENST00000392025 IKQ13123 557 aaPredicted RBP21.19■□□□□ 0.98
SPTBN4-204ENST00000392025 PDIA4P13667 645 aaKnown RBP21.19■□□□□ 0.98
SPTBN4-204ENST00000392025 RAPGEF2Q9Y4G8 1499 aa21.19■□□□□ 0.98
SPTBN4-204ENST00000392025 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
SPTBN4-204ENST00000392025 DNAI2Q9GZS0 605 aa21.18■□□□□ 0.98
SPTBN4-204ENST00000392025 PDILTQ8N807 584 aa21.18■□□□□ 0.98
SPTBN4-204ENST00000392025 CDK5RAP3Q96JB5 506 aa21.18■□□□□ 0.98
SPTBN4-204ENST00000392025 HIP1O00291 1037 aa21.17■□□□□ 0.98
SPTBN4-204ENST00000392025 FEZ1Q99689 392 aa21.17■□□□□ 0.98
SPTBN4-204ENST00000392025 SDF4Q9BRK5 362 aa21.17■□□□□ 0.98
SPTBN4-204ENST00000392025 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
SPTBN4-204ENST00000392025 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
SPTBN4-204ENST00000392025 NF2P35240 595 aa21.17■□□□□ 0.98
SPTBN4-204ENST00000392025 CCDC192P0DO97 292 aa21.16■□□□□ 0.98
SPTBN4-204ENST00000392025 RAPGEF4Q8WZA2 1011 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms