RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
TRAV40-201ENST00000390467 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
TRAV40-201ENST00000390467 GFRA3O60609 400 aa8.55□□□□□ -1.04
TRAV40-201ENST00000390467 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
TRAV40-201ENST00000390467 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
TRAV40-201ENST00000390467 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
TRAV40-201ENST00000390467 LCE2BO14633 110 aa8.54□□□□□ -1.04
TRAV40-201ENST00000390467 NDUFV2P19404 249 aa8.54□□□□□ -1.04
TRAV40-201ENST00000390467 MMP16P51512 607 aa8.54□□□□□ -1.04
TRAV40-201ENST00000390467 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
TRAV40-201ENST00000390467 FDX1P10109 184 aa8.53□□□□□ -1.04
TRAV40-201ENST00000390467 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
TRAV40-201ENST00000390467 NRG2O14511 850 aaPredicted RBP8.52□□□□□ -1.05
TRAV40-201ENST00000390467 Q6ZNB5 142 aa8.52□□□□□ -1.05
TRAV40-201ENST00000390467 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
TRAV40-201ENST00000390467 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
TRAV40-201ENST00000390467 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
TRAV40-201ENST00000390467 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
TRAV40-201ENST00000390467 RETREG3Q86VR2 466 aa8.49□□□□□ -1.05
TRAV40-201ENST00000390467 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
TRAV40-201ENST00000390467 TNFRSF10AO00220 468 aa8.48□□□□□ -1.05
TRAV40-201ENST00000390467 GDF9O60383 454 aa8.48□□□□□ -1.05
TRAV40-201ENST00000390467 JUNDP17535 347 aa8.48□□□□□ -1.05
TRAV40-201ENST00000390467 RPIAP49247 311 aa8.48□□□□□ -1.05
TRAV40-201ENST00000390467 RSBN1LQ6PCB5 846 aaPredicted RBP8.48□□□□□ -1.05
TRAV40-201ENST00000390467 PRR20EP86478 221 aa8.47□□□□□ -1.05
TRAV40-201ENST00000390467 PRR20CP86479 221 aa8.47□□□□□ -1.05
TRAV40-201ENST00000390467 PRR20DP86480 221 aa8.47□□□□□ -1.05
TRAV40-201ENST00000390467 PRR20BP86481 221 aa8.47□□□□□ -1.05
TRAV40-201ENST00000390467 PRR20AP86496 221 aa8.47□□□□□ -1.05
TRAV40-201ENST00000390467 PKD2L1Q9P0L9 805 aa8.47□□□□□ -1.05
TRAV40-201ENST00000390467 PCDHB15Q9Y5E8 787 aa8.46□□□□□ -1.06
TRAV40-201ENST00000390467 FOXC1Q12948 553 aa8.45□□□□□ -1.06
TRAV40-201ENST00000390467 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
TRAV40-201ENST00000390467 SPTLC1O15269 473 aa8.44□□□□□ -1.06
TRAV40-201ENST00000390467 TRIM32Q13049 653 aa8.44□□□□□ -1.06
TRAV40-201ENST00000390467 MYSM1Q5VVJ2 828 aa8.44□□□□□ -1.06
TRAV40-201ENST00000390467 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
TRAV40-201ENST00000390467 GJA5P36382 358 aa8.43□□□□□ -1.06
TRAV40-201ENST00000390467 MTMR2Q13614 643 aa8.43□□□□□ -1.06
TRAV40-201ENST00000390467 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
TRAV40-201ENST00000390467 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
TRAV40-201ENST00000390467 DIXDC1Q155Q3 683 aa8.42□□□□□ -1.06
TRAV40-201ENST00000390467 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
TRAV40-201ENST00000390467 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
TRAV40-201ENST00000390467 NUDT12Q9BQG2 462 aa8.42□□□□□ -1.06
TRAV40-201ENST00000390467 ZBTB24O43167 697 aaPredicted RBP8.41□□□□□ -1.06
TRAV40-201ENST00000390467 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
TRAV40-201ENST00000390467 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
TRAV40-201ENST00000390467 PTCRAQ6ISU1 281 aaPredicted RBP8.41□□□□□ -1.06
TRAV40-201ENST00000390467 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
TRAV40-201ENST00000390467 CFAP99D6REC4 459 aa8.4□□□□□ -1.06
TRAV40-201ENST00000390467 HRCP23327 699 aa8.4□□□□□ -1.06
TRAV40-201ENST00000390467 QPCTQ16769 361 aa8.4□□□□□ -1.06
TRAV40-201ENST00000390467 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
TRAV40-201ENST00000390467 SKOR1P84550 965 aa8.39□□□□□ -1.07
TRAV40-201ENST00000390467 KDM4CQ9H3R0 1056 aa8.39□□□□□ -1.07
TRAV40-201ENST00000390467 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
TRAV40-201ENST00000390467 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
TRAV40-201ENST00000390467 PTPRNQ16849 979 aa8.38□□□□□ -1.07
TRAV40-201ENST00000390467 ZBTB3Q9H5J0 574 aa8.38□□□□□ -1.07
TRAV40-201ENST00000390467 TOR4AQ9NXH8 423 aa8.38□□□□□ -1.07
TRAV40-201ENST00000390467 WNT7AO00755 349 aa8.37□□□□□ -1.07
TRAV40-201ENST00000390467 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
TRAV40-201ENST00000390467 DESI1Q6ICB0 168 aa8.37□□□□□ -1.07
TRAV40-201ENST00000390467 FAM117AQ9C073 453 aa8.37□□□□□ -1.07
TRAV40-201ENST00000390467 CLK2P49760 499 aaKnown RBP8.36□□□□□ -1.07
TRAV40-201ENST00000390467 MYT1Q01538 1121 aa8.36□□□□□ -1.07
TRAV40-201ENST00000390467 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
TRAV40-201ENST00000390467 PLEKHG3A1L390 1219 aa8.35□□□□□ -1.07
TRAV40-201ENST00000390467 DGAT1O75907 488 aa8.35□□□□□ -1.07
TRAV40-201ENST00000390467 MRGPRX2Q96LB1 330 aa8.35□□□□□ -1.07
TRAV40-201ENST00000390467 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
TRAV40-201ENST00000390467 LILRB3O75022 631 aa8.34□□□□□ -1.07
TRAV40-201ENST00000390467 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
TRAV40-201ENST00000390467 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
TRAV40-201ENST00000390467 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
TRAV40-201ENST00000390467 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
TRAV40-201ENST00000390467 WNT7BP56706 349 aa8.33□□□□□ -1.08
TRAV40-201ENST00000390467 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
TRAV40-201ENST00000390467 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
TRAV40-201ENST00000390467 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
TRAV40-201ENST00000390467 LYPD8Q6UX82 237 aa8.33□□□□□ -1.08
TRAV40-201ENST00000390467 CYP4X1Q8N118 509 aa8.33□□□□□ -1.08
TRAV40-201ENST00000390467 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
TRAV40-201ENST00000390467 ST8SIA5O15466 376 aa8.32□□□□□ -1.08
TRAV40-201ENST00000390467 F12P00748 615 aaPredicted RBP8.32□□□□□ -1.08
TRAV40-201ENST00000390467 KCNH2Q12809 1159 aa8.32□□□□□ -1.08
TRAV40-201ENST00000390467 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
TRAV40-201ENST00000390467 SMPD1P17405 629 aa8.31□□□□□ -1.08
TRAV40-201ENST00000390467 TSC1Q92574 1164 aa8.31□□□□□ -1.08
TRAV40-201ENST00000390467 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
TRAV40-201ENST00000390467 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
TRAV40-201ENST00000390467 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
TRAV40-201ENST00000390467 J3QL48 77 aa8.3□□□□□ -1.08
TRAV40-201ENST00000390467 SH3BP2P78314 561 aa8.3□□□□□ -1.08
TRAV40-201ENST00000390467 SH3D19Q5HYK7 790 aa8.3□□□□□ -1.08
TRAV40-201ENST00000390467 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
TRAV40-201ENST00000390467 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
TRAV40-201ENST00000390467 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms