RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 ROBO2Q9HCK4 1378 aa10.71□□□□□ -0.69
TRAV27-201ENST00000390457 RRBP1Q9P2E9 1410 aaKnown RBP10.71□□□□□ -0.69
TRAV27-201ENST00000390457 RGS12O14924 1447 aa10.7□□□□□ -0.7
TRAV27-201ENST00000390457 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
TRAV27-201ENST00000390457 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
TRAV27-201ENST00000390457 QTRT2Q9H974 415 aaKnown RBP10.7□□□□□ -0.7
TRAV27-201ENST00000390457 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
TRAV27-201ENST00000390457 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
TRAV27-201ENST00000390457 KIF1BO60333 1816 aa10.69□□□□□ -0.7
TRAV27-201ENST00000390457 RPGRIP1LQ68CZ1 1315 aa10.68□□□□□ -0.7
TRAV27-201ENST00000390457 C8orf37Q96NL8 207 aa10.68□□□□□ -0.7
TRAV27-201ENST00000390457 FNBP4Q8N3X1 1017 aaPredicted RBP10.67□□□□□ -0.7
TRAV27-201ENST00000390457 HFM1A2PYH4 1435 aa10.66□□□□□ -0.7
TRAV27-201ENST00000390457 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
TRAV27-201ENST00000390457 NGLY1Q96IV0 654 aa10.65□□□□□ -0.7
TRAV27-201ENST00000390457 MYOM2P54296 1465 aa10.64□□□□□ -0.71
TRAV27-201ENST00000390457 COL22A1Q8NFW1 1626 aaPredicted RBP10.64□□□□□ -0.71
TRAV27-201ENST00000390457 ATRNO75882 1429 aa10.64□□□□□ -0.71
TRAV27-201ENST00000390457 PPLO60437 1756 aa10.64□□□□□ -0.71
TRAV27-201ENST00000390457 CAPN15O75808 1086 aa10.63□□□□□ -0.71
TRAV27-201ENST00000390457 PXDNQ92626 1479 aa10.62□□□□□ -0.71
TRAV27-201ENST00000390457 CDC42BPGQ6DT37 1551 aa10.62□□□□□ -0.71
TRAV27-201ENST00000390457 TECPR2O15040 1411 aa10.62□□□□□ -0.71
TRAV27-201ENST00000390457 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
TRAV27-201ENST00000390457 USP21Q9UK80 565 aa10.62□□□□□ -0.71
TRAV27-201ENST00000390457 TRPC5Q9UL62 973 aaPredicted RBP10.62□□□□□ -0.71
TRAV27-201ENST00000390457 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
TRAV27-201ENST00000390457 ADGRF5Q8IZF2 1346 aa10.61□□□□□ -0.71
TRAV27-201ENST00000390457 SPATA31E1Q6ZUB1 1445 aa10.61□□□□□ -0.71
TRAV27-201ENST00000390457 NPHP3Q7Z494 1330 aa10.6□□□□□ -0.71
TRAV27-201ENST00000390457 ATAD2Q6PL18 1390 aa10.6□□□□□ -0.71
TRAV27-201ENST00000390457 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
TRAV27-201ENST00000390457 FOXO3O43524 673 aa10.59□□□□□ -0.71
TRAV27-201ENST00000390457 ESCO1Q5FWF5 840 aa10.59□□□□□ -0.71
TRAV27-201ENST00000390457 WAPLQ7Z5K2 1190 aa10.59□□□□□ -0.71
TRAV27-201ENST00000390457 LRPPRCP42704 1394 aaKnown RBP10.59□□□□□ -0.71
TRAV27-201ENST00000390457 SPINK5Q9NQ38 1064 aaPredicted RBP10.58□□□□□ -0.72
TRAV27-201ENST00000390457 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
TRAV27-201ENST00000390457 ANKRD30BQ9BXX2 1392 aa10.57□□□□□ -0.72
TRAV27-201ENST00000390457 PLEKHH1Q9ULM0 1364 aa10.57□□□□□ -0.72
TRAV27-201ENST00000390457 MARF1Q9Y4F3 1742 aaKnown RBP10.57□□□□□ -0.72
TRAV27-201ENST00000390457 SPATA31A3Q5VYP0 1347 aa10.57□□□□□ -0.72
TRAV27-201ENST00000390457 IFT172Q9UG01 1749 aa10.56□□□□□ -0.72
TRAV27-201ENST00000390457 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
TRAV27-201ENST00000390457 TMEM132EQ6IEE7 984 aa10.56□□□□□ -0.72
TRAV27-201ENST00000390457 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
TRAV27-201ENST00000390457 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
TRAV27-201ENST00000390457 SLIT2O94813 1529 aa10.56□□□□□ -0.72
TRAV27-201ENST00000390457 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
TRAV27-201ENST00000390457 PIK3C2GO75747 1445 aa10.56□□□□□ -0.72
TRAV27-201ENST00000390457 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
TRAV27-201ENST00000390457 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
TRAV27-201ENST00000390457 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
TRAV27-201ENST00000390457 STK26Q9P289 416 aa10.55□□□□□ -0.72
TRAV27-201ENST00000390457 FMN2Q9NZ56 1722 aa10.55□□□□□ -0.72
TRAV27-201ENST00000390457 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
TRAV27-201ENST00000390457 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
TRAV27-201ENST00000390457 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.54□□□□□ -0.72
TRAV27-201ENST00000390457 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
TRAV27-201ENST00000390457 GLI3P10071 1580 aa10.53□□□□□ -0.72
TRAV27-201ENST00000390457 UNC5CLQ8IV45 518 aa10.53□□□□□ -0.72
TRAV27-201ENST00000390457 C14orf93Q9H972 538 aaKnown RBP10.53□□□□□ -0.72
TRAV27-201ENST00000390457 NRXN1Q9ULB1 1477 aa10.53□□□□□ -0.72
TRAV27-201ENST00000390457 KRT28Q7Z3Y7 464 aa10.52□□□□□ -0.73
TRAV27-201ENST00000390457 RALGAPBQ86X10 1494 aa10.52□□□□□ -0.73
TRAV27-201ENST00000390457 KIF1AQ12756 1690 aa10.51□□□□□ -0.73
TRAV27-201ENST00000390457 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
TRAV27-201ENST00000390457 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
TRAV27-201ENST00000390457 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
TRAV27-201ENST00000390457 PHF8Q9UPP1 1060 aa10.5□□□□□ -0.73
TRAV27-201ENST00000390457 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
TRAV27-201ENST00000390457 RGPD8O14715 1765 aaPredicted RBP10.49□□□□□ -0.73
TRAV27-201ENST00000390457 VPS72Q15906 364 aa10.49□□□□□ -0.73
TRAV27-201ENST00000390457 CFAP70Q5T0N1 1121 aa10.49□□□□□ -0.73
TRAV27-201ENST00000390457 SBNO1A3KN83 1393 aa10.49□□□□□ -0.73
TRAV27-201ENST00000390457 BRWD3Q6RI45 1802 aa10.49□□□□□ -0.73
TRAV27-201ENST00000390457 BLMP54132 1417 aaPredicted RBP10.49□□□□□ -0.73
TRAV27-201ENST00000390457 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
TRAV27-201ENST00000390457 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
TRAV27-201ENST00000390457 PSME1Q06323 249 aa10.47□□□□□ -0.73
TRAV27-201ENST00000390457 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
TRAV27-201ENST00000390457 DHX57Q6P158 1386 aaKnown RBP10.47□□□□□ -0.73
TRAV27-201ENST00000390457 DLC1Q96QB1 1528 aa10.47□□□□□ -0.73
TRAV27-201ENST00000390457 FAM83GA6ND36 823 aa10.46□□□□□ -0.73
TRAV27-201ENST00000390457 DEFB132Q7Z7B7 95 aa10.46□□□□□ -0.73
TRAV27-201ENST00000390457 PRAM1Q96QH2 718 aa10.46□□□□□ -0.73
TRAV27-201ENST00000390457 ADGRB1O14514 1584 aa10.46□□□□□ -0.74
TRAV27-201ENST00000390457 ABCA3Q99758 1704 aa10.46□□□□□ -0.74
TRAV27-201ENST00000390457 NWD2Q9ULI1 1742 aa10.46□□□□□ -0.74
TRAV27-201ENST00000390457 ANKARQ7Z5J8 1434 aa10.45□□□□□ -0.74
TRAV27-201ENST00000390457 ARHGEF10O15013 1369 aa10.45□□□□□ -0.74
TRAV27-201ENST00000390457 NPM3O75607 178 aaKnown RBP10.45□□□□□ -0.74
TRAV27-201ENST00000390457 PLCH1Q4KWH8 1693 aa10.44□□□□□ -0.74
TRAV27-201ENST00000390457 ADGRB2O60241 1585 aa10.44□□□□□ -0.74
TRAV27-201ENST00000390457 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
TRAV27-201ENST00000390457 TRPM3Q9HCF6 1732 aaPredicted RBP10.44□□□□□ -0.74
TRAV27-201ENST00000390457 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
TRAV27-201ENST00000390457 SAFB2Q14151 953 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAV27-201ENST00000390457 KRT27Q7Z3Y8 459 aa10.43□□□□□ -0.74
TRAV27-201ENST00000390457 PMFBP1Q8TBY8 1022 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms