RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 FUT2Q10981 343 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 MORN1Q5T089 497 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 LCE1DQ5T752 114 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 TMEM151AQ8N4L1 468 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 FAM160A2Q8N612 972 aaPredicted RBP1.89□□□□□ -2.11
SNORD28-201ENST00000384706 KCNV2Q8TDN2 545 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 PXYLP1Q8TE99 480 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 NLRP7Q8WX94 980 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 TOR4AQ9NXH8 423 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 SLC27A5Q9Y2P5 690 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 FMNL1O95466 1100 aaPredicted RBP1.88□□□□□ -2.11
SNORD28-201ENST00000384706 GMPRP36959 345 aa1.88□□□□□ -2.11
SNORD28-201ENST00000384706 SMCPP49901 116 aaPredicted RBP1.88□□□□□ -2.11
SNORD28-201ENST00000384706 HIC1Q14526 733 aa1.88□□□□□ -2.11
SNORD28-201ENST00000384706 AMER1Q5JTC6 1135 aaPredicted RBP1.88□□□□□ -2.11
SNORD28-201ENST00000384706 RBM26Q5T8P6 1007 aaKnown RBP1.88□□□□□ -2.11
SNORD28-201ENST00000384706 LMOD2Q6P5Q4 547 aa1.88□□□□□ -2.11
SNORD28-201ENST00000384706 METTL3Q86U44 580 aaKnown RBP1.88□□□□□ -2.11
SNORD28-201ENST00000384706 KRTAP19-1Q8IUB9 90 aa1.88□□□□□ -2.11
SNORD28-201ENST00000384706 DAXXQ9UER7 740 aaPredicted RBP1.88□□□□□ -2.11
SNORD28-201ENST00000384706 J3QL48 77 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 GNPATO15228 680 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 ADAM23O75077 832 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 GDF11O95390 407 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 IGHA1P01876 353 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 SNRPBP14678 240 aaKnown RBP1.87□□□□□ -2.11
SNORD28-201ENST00000384706 GCGRP47871 477 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 RASSF7Q02833 373 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 CTC1Q2NKJ3 1217 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 BRICD5Q6PL45 260 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 CCDC24Q8N4L8 307 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 SNIP1Q8TAD8 396 aaKnown RBP1.87□□□□□ -2.11
SNORD28-201ENST00000384706 THAP11Q96EK4 314 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 MRGPRX2Q96LB1 330 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 KRTAP4-9Q9BYQ8 210 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 RTN4Q9NQC3 1192 aaKnown RBP1.87□□□□□ -2.11
SNORD28-201ENST00000384706 PRDM9Q9NQV7 894 aa1.87□□□□□ -2.11
SNORD28-201ENST00000384706 WNT7AO00755 349 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 SMPD1P17405 629 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 GRIPAP1Q4V328 841 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 RNF19BQ6ZMZ0 732 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 P3H3Q8IVL6 736 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 SULF1Q8IWU6 871 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 HPS1Q92902 700 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 ATP13A2Q9NQ11 1180 aa1.86□□□□□ -2.11
SNORD28-201ENST00000384706 SALL2Q9Y467 1007 aaPredicted RBP1.86□□□□□ -2.11
SNORD28-201ENST00000384706 TRIM32Q13049 653 aa1.85□□□□□ -2.11
SNORD28-201ENST00000384706 Q3C1V9 767 aa1.85□□□□□ -2.11
SNORD28-201ENST00000384706 SMYD5Q6GMV2 418 aa1.85□□□□□ -2.11
SNORD28-201ENST00000384706 TRIM47Q96LD4 638 aa1.85□□□□□ -2.11
SNORD28-201ENST00000384706 PHOX2BQ99453 314 aa1.85□□□□□ -2.11
SNORD28-201ENST00000384706 SENP2Q9HC62 589 aa1.85□□□□□ -2.11
SNORD28-201ENST00000384706 TESPA1A2RU30 521 aaPredicted RBP1.84□□□□□ -2.11
SNORD28-201ENST00000384706 KDM4AO75164 1064 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 ALDH1A1P00352 501 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 VEGFBP49765 207 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 MMP16P51512 607 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 MSS51Q4VC12 460 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 RC3H1Q5TC82 1133 aaKnown RBP1.84□□□□□ -2.11
SNORD28-201ENST00000384706 NPAS3Q8IXF0 933 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 Q8N3U1 123 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 SLC16A10Q8TF71 515 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 HLA-CQ95604 372 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 KIFC2Q96AC6 838 aa1.84□□□□□ -2.11
SNORD28-201ENST00000384706 USB1Q9BQ65 265 aaKnown RBP1.84□□□□□ -2.11
SNORD28-201ENST00000384706 REPIN1Q9BWE0 567 aaKnown RBP1.84□□□□□ -2.11
SNORD28-201ENST00000384706 CAPN5O15484 640 aaPredicted RBP1.83□□□□□ -2.12
SNORD28-201ENST00000384706 DXOO77932 396 aaKnown RBP1.83□□□□□ -2.12
SNORD28-201ENST00000384706 SKOR1P84550 965 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 FOXK2Q01167 660 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 GUCA2AQ02747 115 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 GPIHBP1Q8IV16 184 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 EHBP1Q8NDI1 1231 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 SYMPKQ92797 1274 aaKnown RBP1.83□□□□□ -2.12
SNORD28-201ENST00000384706 IRF7Q92985 503 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 NXF1Q9UBU9 619 aaKnown RBP1.83□□□□□ -2.12
SNORD28-201ENST00000384706 DNMT3AQ9Y6K1 912 aaPredicted RBP1.83□□□□□ -2.12
SNORD28-201ENST00000384706 WASF2Q9Y6W5 498 aa1.83□□□□□ -2.12
SNORD28-201ENST00000384706 H3BM21 787 aa1.82□□□□□ -2.12
SNORD28-201ENST00000384706 GPR37O15354 613 aa1.82□□□□□ -2.12
SNORD28-201ENST00000384706 BMP1P13497 986 aa1.82□□□□□ -2.12
SNORD28-201ENST00000384706 CD46P15529 392 aa1.82□□□□□ -2.12
SNORD28-201ENST00000384706 WNT7BP56706 349 aa1.82□□□□□ -2.12
SNORD28-201ENST00000384706 MDM2Q00987 491 aaPredicted RBP1.82□□□□□ -2.12
SNORD28-201ENST00000384706 PTCRAQ6ISU1 281 aaPredicted RBP1.82□□□□□ -2.12
SNORD28-201ENST00000384706 ERBB4Q15303 1308 aa1.82□□□□□ -2.12
SNORD28-201ENST00000384706 C6orf229H3BNL8 230 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 IRF6O14896 467 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 SIAH2O43255 324 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 HOXA2O43364 376 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 JUNDP17535 347 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 USP46P62068 366 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 GPAT2Q6NUI2 795 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 TRIM46Q7Z4K8 759 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 NUTM1Q86Y26 1132 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 KRI1Q8N9T8 703 aaKnown RBP1.81□□□□□ -2.12
SNORD28-201ENST00000384706 ZFP42Q96MM3 310 aa1.81□□□□□ -2.12
SNORD28-201ENST00000384706 NUDT12Q9BQG2 462 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms