RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 PPP4R3BQ5MIZ7 849 aa6.26□□□□□ -1.41
RNU6-339P-201ENST00000384310 TATDN2Q93075 761 aa6.26□□□□□ -1.41
RNU6-339P-201ENST00000384310 LOC105371045A0A1W2PR82 267 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 TMEM88BA6NKF7 163 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 C3orf80F5H4A9 247 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 GCGRP47871 477 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 SEMA3FQ13275 785 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 PACS2Q86VP3 889 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 PRR7Q8TB68 274 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 KHSRPQ92945 711 aaKnown RBP eCLIP6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 PCDHGC3Q9UN70 934 aa6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 MAFBQ9Y5Q3 323 aaPredicted RBP6.25□□□□□ -1.41
RNU6-339P-201ENST00000384310 TRIM6-TRIM34B2RNG4 842 aa6.24□□□□□ -1.41
RNU6-339P-201ENST00000384310 PTPREP23469 700 aa6.24□□□□□ -1.41
RNU6-339P-201ENST00000384310 ARSIQ5FYB1 569 aa6.24□□□□□ -1.41
RNU6-339P-201ENST00000384310 HLA-CQ95604 372 aa6.24□□□□□ -1.41
RNU6-339P-201ENST00000384310 BCL2L12Q9HB09 334 aa6.24□□□□□ -1.41
RNU6-339P-201ENST00000384310 CFAP99D6REC4 459 aa6.23□□□□□ -1.41
RNU6-339P-201ENST00000384310 SMAPO00193 183 aa6.23□□□□□ -1.41
RNU6-339P-201ENST00000384310 RIMBP2O15034 1052 aa6.23□□□□□ -1.41
RNU6-339P-201ENST00000384310 DOK7Q18PE1 504 aa6.23□□□□□ -1.41
RNU6-339P-201ENST00000384310 PNMA1Q8ND90 353 aa6.23□□□□□ -1.41
RNU6-339P-201ENST00000384310 GNEQ9Y223 722 aaKnown RBP6.23□□□□□ -1.41
RNU6-339P-201ENST00000384310 C6orf229H3BNL8 230 aa6.22□□□□□ -1.41
RNU6-339P-201ENST00000384310 ATP9BO43861 1147 aa6.22□□□□□ -1.41
RNU6-339P-201ENST00000384310 TBC1D9Q6ZT07 1266 aa6.22□□□□□ -1.41
RNU6-339P-201ENST00000384310 EPS8L1Q8TE68 723 aa6.22□□□□□ -1.41
RNU6-339P-201ENST00000384310 PSDA5PKW4 1024 aaPredicted RBP6.21□□□□□ -1.42
RNU6-339P-201ENST00000384310 GABBR2O75899 941 aa6.21□□□□□ -1.42
RNU6-339P-201ENST00000384310 EIF4G2P78344 907 aaKnown RBP eCLIP6.21□□□□□ -1.42
RNU6-339P-201ENST00000384310 SLF2Q8IX21 1173 aa6.21□□□□□ -1.42
RNU6-339P-201ENST00000384310 CCER1Q8TC90 406 aaPredicted RBP6.2□□□□□ -1.42
RNU6-339P-201ENST00000384310 LHX6Q9UPM6 363 aa6.2□□□□□ -1.42
RNU6-339P-201ENST00000384310 NR6A1Q15406 480 aa6.19□□□□□ -1.42
RNU6-339P-201ENST00000384310 GRIPAP1Q4V328 841 aa6.19□□□□□ -1.42
RNU6-339P-201ENST00000384310 ZSWIM6Q9HCJ5 1215 aa6.19□□□□□ -1.42
RNU6-339P-201ENST00000384310 SHROOM4Q9ULL8 1493 aa6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 SLC10A3P09131 477 aa6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 PROX2Q3B8N5 592 aa6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 TMEM164Q5U3C3 297 aa6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 STK32AQ8WU08 396 aa6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 USP35Q9P2H5 1018 aa6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 NOVA2Q9UNW9 492 aaKnown RBP6.18□□□□□ -1.42
RNU6-339P-201ENST00000384310 HOXB3P14651 431 aaPredicted RBP6.17□□□□□ -1.42
RNU6-339P-201ENST00000384310 SLC4A3P48751 1232 aa6.17□□□□□ -1.42
RNU6-339P-201ENST00000384310 ELOAQ14241 798 aaKnown RBP6.17□□□□□ -1.42
RNU6-339P-201ENST00000384310 SWT1Q5T5J6 900 aaKnown RBP6.17□□□□□ -1.42
RNU6-339P-201ENST00000384310 ZMIZ1Q9ULJ6 1067 aa6.17□□□□□ -1.42
RNU6-339P-201ENST00000384310 UNCXA6NJT0 531 aa6.16□□□□□ -1.42
RNU6-339P-201ENST00000384310 NR1H3Q13133 447 aa6.16□□□□□ -1.42
RNU6-339P-201ENST00000384310 GPR153Q6NV75 609 aa6.16□□□□□ -1.42
RNU6-339P-201ENST00000384310 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
RNU6-339P-201ENST00000384310 KCNK17Q96T54 332 aa6.16□□□□□ -1.42
RNU6-339P-201ENST00000384310 RBM47A0AV96 593 aaKnown RBP6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 USP17L3A6NCW0 530 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 USP17L4A6NCW7 530 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 PIK3CDO00329 1044 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 PER1O15534 1290 aaPredicted RBP6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 CFHP08603 1231 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 FUT2Q10981 343 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 KANK4Q5T7N3 995 aaPredicted RBP6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 USP17L2Q6R6M4 530 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 USP17L1Q7RTZ2 530 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 TXNDC2Q86VQ3 553 aa6.15□□□□□ -1.42
RNU6-339P-201ENST00000384310 USP17L5A8MUK1 530 aa6.14□□□□□ -1.43
RNU6-339P-201ENST00000384310 SKIP12755 728 aa6.14□□□□□ -1.43
RNU6-339P-201ENST00000384310 NFATC2IPQ8NCF5 419 aa6.14□□□□□ -1.43
RNU6-339P-201ENST00000384310 SYMPKQ92797 1274 aaKnown RBP6.14□□□□□ -1.43
RNU6-339P-201ENST00000384310 KIAA1468Q9P260 1216 aa6.14□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L15C9J2P7 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L10C9JJH3 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L12C9JPN9 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L21D6R901 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 FBXO45P0C2W1 286 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 ERCC3P19447 782 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 HDGFP51858 240 aaKnown RBP6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 RETREG3Q86VR2 466 aa6.13□□□□□ -1.43
RNU6-339P-201ENST00000384310 FAM196BA6NMK8 535 aa6.12□□□□□ -1.43
RNU6-339P-201ENST00000384310 ZBBXA8MT70 800 aa6.12□□□□□ -1.43
RNU6-339P-201ENST00000384310 RNF40O75150 1001 aa6.12□□□□□ -1.43
RNU6-339P-201ENST00000384310 ARID4AP29374 1257 aaPredicted RBP6.12□□□□□ -1.43
RNU6-339P-201ENST00000384310 ATP6V1AP38606 617 aa6.12□□□□□ -1.43
RNU6-339P-201ENST00000384310 PLEKHM2Q8IWE5 1019 aa6.12□□□□□ -1.43
RNU6-339P-201ENST00000384310 PHLDB3Q6NSJ2 640 aa6.11□□□□□ -1.43
RNU6-339P-201ENST00000384310 LARP1Q6PKG0 1096 aaKnown RBP6.11□□□□□ -1.43
RNU6-339P-201ENST00000384310 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
RNU6-339P-201ENST00000384310 MRRFQ96E11 262 aaKnown RBP6.11□□□□□ -1.43
RNU6-339P-201ENST00000384310 SEPT9Q9UHD8 586 aaPredicted RBP6.11□□□□□ -1.43
RNU6-339P-201ENST00000384310 SOWAHDA6NJG2 315 aa6.1□□□□□ -1.43
RNU6-339P-201ENST00000384310 SSFA2P28290 1259 aa6.1□□□□□ -1.43
RNU6-339P-201ENST00000384310 KMT5BQ4FZB7 885 aa6.1□□□□□ -1.43
RNU6-339P-201ENST00000384310 CRTC2Q53ET0 693 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms