RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 RBM27Q9P2N5 1060 aaKnown RBP26.09■■□□□ 1.77
NKX3-2-201ENST00000382438 IBTKQ9P2D0 1353 aaPredicted RBP26.09■■□□□ 1.77
NKX3-2-201ENST00000382438 GAS2L2Q8NHY3 880 aa26.08■■□□□ 1.77
NKX3-2-201ENST00000382438 ARHGEF12Q9NZN5 1544 aa26.08■■□□□ 1.77
NKX3-2-201ENST00000382438 RBM25P49756 843 aaKnown RBP26.08■■□□□ 1.77
NKX3-2-201ENST00000382438 MYRIPQ8NFW9 859 aa26.08■■□□□ 1.77
NKX3-2-201ENST00000382438 IPO4Q8TEX9 1081 aaKnown RBP26.07■■□□□ 1.76
NKX3-2-201ENST00000382438 NINLQ9Y2I6 1382 aa26.07■■□□□ 1.76
NKX3-2-201ENST00000382438 CGNQ9P2M7 1197 aaKnown RBP26.06■■□□□ 1.76
NKX3-2-201ENST00000382438 ANKRD30AQ9BXX3 1397 aa26.05■■□□□ 1.76
NKX3-2-201ENST00000382438 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
NKX3-2-201ENST00000382438 MAPK8IP2Q13387 824 aaPredicted RBP26.05■■□□□ 1.76
NKX3-2-201ENST00000382438 RNF214Q8ND24 703 aa26.05■■□□□ 1.76
NKX3-2-201ENST00000382438 NESP48681 1621 aa26.05■■□□□ 1.76
NKX3-2-201ENST00000382438 CCDC39Q9UFE4 941 aa26.04■■□□□ 1.76
NKX3-2-201ENST00000382438 WWC1Q8IX03 1113 aa26.04■■□□□ 1.76
NKX3-2-201ENST00000382438 KIF2CQ99661 725 aa26.04■■□□□ 1.76
NKX3-2-201ENST00000382438 RRP7AQ9Y3A4 280 aaKnown RBP26.04■■□□□ 1.76
NKX3-2-201ENST00000382438 MCM5P33992 734 aa26.03■■□□□ 1.76
NKX3-2-201ENST00000382438 AK9Q5TCS8 1911 aa26.03■■□□□ 1.76
NKX3-2-201ENST00000382438 K7ELQ4 463 aaPredicted RBP26.03■■□□□ 1.76
NKX3-2-201ENST00000382438 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
NKX3-2-201ENST00000382438 PTMAP06454 111 aaKnown RBP26.02■■□□□ 1.76
NKX3-2-201ENST00000382438 MAGI2Q86UL8 1455 aa26.02■■□□□ 1.76
NKX3-2-201ENST00000382438 CLASP1Q7Z460 1538 aa26.01■■□□□ 1.75
NKX3-2-201ENST00000382438 LMBRD1Q9NUN5 540 aa26■■□□□ 1.75
NKX3-2-201ENST00000382438 CUL7Q14999 1698 aa26■■□□□ 1.75
NKX3-2-201ENST00000382438 PRAG1Q86YV5 1406 aa25.99■■□□□ 1.75
NKX3-2-201ENST00000382438 KIAA2012Q0VF49 1180 aa25.99■■□□□ 1.75
NKX3-2-201ENST00000382438 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
NKX3-2-201ENST00000382438 CFDP1Q9UEE9 299 aaPredicted RBP25.98■■□□□ 1.75
NKX3-2-201ENST00000382438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.98■■□□□ 1.75
NKX3-2-201ENST00000382438 SCAPERQ9BY12 1400 aa25.98■■□□□ 1.75
NKX3-2-201ENST00000382438 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
NKX3-2-201ENST00000382438 ANKRD50Q9ULJ7 1429 aa25.97■■□□□ 1.75
NKX3-2-201ENST00000382438 SYCE3A1L190 88 aa25.97■■□□□ 1.75
NKX3-2-201ENST00000382438 PRPF40AO75400 957 aaKnown RBP25.97■■□□□ 1.75
NKX3-2-201ENST00000382438 CHAMP1Q96JM3 812 aa25.97■■□□□ 1.75
NKX3-2-201ENST00000382438 PKP1Q13835 747 aa25.96■■□□□ 1.75
NKX3-2-201ENST00000382438 C17orf53Q8N3J3 647 aaPredicted RBP25.96■■□□□ 1.75
NKX3-2-201ENST00000382438 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
NKX3-2-201ENST00000382438 MVPQ14764 893 aaKnown RBP25.96■■□□□ 1.75
NKX3-2-201ENST00000382438 CLEC17AQ6ZS10 378 aa25.95■■□□□ 1.74
NKX3-2-201ENST00000382438 PAXIP1Q6ZW49 1069 aaPredicted RBP25.94■■□□□ 1.74
NKX3-2-201ENST00000382438 GPT2Q8TD30 523 aa25.94■■□□□ 1.74
NKX3-2-201ENST00000382438 U2AF2P26368 475 aaKnown RBP eCLIP25.94■■□□□ 1.74
NKX3-2-201ENST00000382438 TAF7LQ5H9L4 462 aa25.93■■□□□ 1.74
NKX3-2-201ENST00000382438 FTSJ3Q8IY81 847 aaKnown RBP25.93■■□□□ 1.74
NKX3-2-201ENST00000382438 ZNF771Q7L3S4 317 aaPredicted RBP25.93■■□□□ 1.74
NKX3-2-201ENST00000382438 FAM135AQ9P2D6 1515 aa25.93■■□□□ 1.74
NKX3-2-201ENST00000382438 LNPKQ9C0E8 428 aa25.92■■□□□ 1.74
NKX3-2-201ENST00000382438 BCL2L12Q9HB09 334 aa25.92■■□□□ 1.74
NKX3-2-201ENST00000382438 CCDC144AA2RUR9 1427 aa25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 CDK11BP21127 795 aaKnown RBP25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 TMEM63CQ9P1W3 806 aa25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 NSFL1CQ9UNZ2 370 aaKnown RBP25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 KIF3AQ9Y496 699 aa25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 PDCL2Q8N4E4 241 aa25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
NKX3-2-201ENST00000382438 TRPM1Q7Z4N2 1603 aa25.9■■□□□ 1.74
NKX3-2-201ENST00000382438 LRSAM1Q6UWE0 723 aa25.89■■□□□ 1.74
NKX3-2-201ENST00000382438 PRIMPOLQ96LW4 560 aa25.89■■□□□ 1.74
NKX3-2-201ENST00000382438 WDR7Q9Y4E6 1490 aa25.87■■□□□ 1.73
NKX3-2-201ENST00000382438 KDM5DQ9BY66 1539 aa25.87■■□□□ 1.73
NKX3-2-201ENST00000382438 NOLC1Q14978 699 aaKnown RBP eCLIP25.87■■□□□ 1.739e-12■■■■■ 64.6
NKX3-2-201ENST00000382438 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
NKX3-2-201ENST00000382438 HMGN5P82970 282 aaKnown RBP25.86■■□□□ 1.73
NKX3-2-201ENST00000382438 DZIP1LQ8IYY4 767 aaKnown RBP25.86■■□□□ 1.73
NKX3-2-201ENST00000382438 PIK3C2GO75747 1445 aa25.86■■□□□ 1.73
NKX3-2-201ENST00000382438 GTF2F1P35269 517 aaKnown RBP eCLIP25.85■■□□□ 1.73
NKX3-2-201ENST00000382438 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
NKX3-2-201ENST00000382438 ITPRIPQ8IWB1 547 aa25.85■■□□□ 1.73
NKX3-2-201ENST00000382438 KIF16BQ96L93 1317 aa25.85■■□□□ 1.73
NKX3-2-201ENST00000382438 ABCC2Q92887 1545 aa25.84■■□□□ 1.73
NKX3-2-201ENST00000382438 FOXD4L5Q5VV16 416 aaPredicted RBP25.84■■□□□ 1.73
NKX3-2-201ENST00000382438 FOXD4L4Q8WXT5 416 aaPredicted RBP25.84■■□□□ 1.73
NKX3-2-201ENST00000382438 TTC12Q9H892 705 aaPredicted RBP25.83■■□□□ 1.73
NKX3-2-201ENST00000382438 ZKSCAN2Q63HK3 967 aa25.83■■□□□ 1.73
NKX3-2-201ENST00000382438 HDAC1Q13547 482 aaPredicted RBP25.82■■□□□ 1.72
NKX3-2-201ENST00000382438 TAF3Q5VWG9 929 aa25.82■■□□□ 1.72
NKX3-2-201ENST00000382438 KCNJ4P48050 445 aa25.81■■□□□ 1.72
NKX3-2-201ENST00000382438 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
NKX3-2-201ENST00000382438 IRX5P78411 483 aaPredicted RBP25.8■■□□□ 1.72
NKX3-2-201ENST00000382438 NUCB2P80303 420 aa25.8■■□□□ 1.72
NKX3-2-201ENST00000382438 PIBF1Q8WXW3 757 aa25.8■■□□□ 1.72
NKX3-2-201ENST00000382438 PLXNC1O60486 1568 aa25.79■■□□□ 1.72
NKX3-2-201ENST00000382438 TBC1D9Q6ZT07 1266 aa25.78■■□□□ 1.72
NKX3-2-201ENST00000382438 TCP11L2Q8N4U5 519 aa25.78■■□□□ 1.72
NKX3-2-201ENST00000382438 PRDM15P57071 1507 aaPredicted RBP25.77■■□□□ 1.72
NKX3-2-201ENST00000382438 CYP2E1P05181 493 aaPredicted RBP25.77■■□□□ 1.72
NKX3-2-201ENST00000382438 CHMP4AQ9BY43 222 aa25.77■■□□□ 1.72
NKX3-2-201ENST00000382438 ZGPATQ8N5A5 531 aaKnown RBP25.77■■□□□ 1.72
NKX3-2-201ENST00000382438 NGEFQ8N5V2 710 aa25.76■■□□□ 1.71
NKX3-2-201ENST00000382438 ASXL1Q8IXJ9 1541 aa25.75■■□□□ 1.71
NKX3-2-201ENST00000382438 DNMBPQ6XZF7 1577 aa25.75■■□□□ 1.71
NKX3-2-201ENST00000382438 TRIM27P14373 513 aa25.75■■□□□ 1.71
NKX3-2-201ENST00000382438 NUCB1Q02818 461 aa25.75■■□□□ 1.71
NKX3-2-201ENST00000382438 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
NKX3-2-201ENST00000382438 WDR62O43379 1518 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms