RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 EIF2S2P20042 333 aaKnown RBP22.13■■□□□ 1.13
UBL3-201ENST00000380680 ATAD2Q6PL18 1390 aa22.13■■□□□ 1.13
UBL3-201ENST00000380680 AAMPQ13685 434 aa22.13■■□□□ 1.13
UBL3-201ENST00000380680 PRAG1Q86YV5 1406 aa22.13■■□□□ 1.13
UBL3-201ENST00000380680 PTMAP06454 111 aaKnown RBP22.13■■□□□ 1.13
UBL3-201ENST00000380680 NAP1L2Q9ULW6 460 aaPredicted RBP22.13■■□□□ 1.13
UBL3-201ENST00000380680 TAOK2Q9UL54 1235 aa22.12■■□□□ 1.13
UBL3-201ENST00000380680 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
UBL3-201ENST00000380680 TSPYL4Q9UJ04 414 aa22.12■■□□□ 1.13
UBL3-201ENST00000380680 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
UBL3-201ENST00000380680 RTEL1-TNFRSF6BF6WH68 1400 aa22.12■■□□□ 1.13
UBL3-201ENST00000380680 C20orf194Q5TEA3 1177 aa22.11■■□□□ 1.13
UBL3-201ENST00000380680 TESK2Q96S53 571 aa22.11■■□□□ 1.13
UBL3-201ENST00000380680 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
UBL3-201ENST00000380680 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
UBL3-201ENST00000380680 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
UBL3-201ENST00000380680 FKBP5Q13451 457 aaPredicted RBP22.1■■□□□ 1.13
UBL3-201ENST00000380680 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
UBL3-201ENST00000380680 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
UBL3-201ENST00000380680 L1TD1Q5T7N2 865 aaKnown RBP22.09■■□□□ 1.13
UBL3-201ENST00000380680 BACH2Q9BYV9 841 aa22.09■■□□□ 1.13
UBL3-201ENST00000380680 HDAC5Q9UQL6 1122 aa22.09■■□□□ 1.13
UBL3-201ENST00000380680 PLCB2Q00722 1185 aa22.08■■□□□ 1.13
UBL3-201ENST00000380680 SULT6B1Q6IMI4 303 aa22.08■■□□□ 1.13
UBL3-201ENST00000380680 ASXL2Q76L83 1435 aa22.08■■□□□ 1.12
UBL3-201ENST00000380680 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
UBL3-201ENST00000380680 RRS1Q15050 365 aaKnown RBP22.07■■□□□ 1.12
UBL3-201ENST00000380680 NOL8Q76FK4 1167 aaKnown RBP22.07■■□□□ 1.12
UBL3-201ENST00000380680 PDZRN3Q9UPQ7 1066 aa22.07■■□□□ 1.12
UBL3-201ENST00000380680 CCDC61Q9Y6R9 512 aa22.07■■□□□ 1.12
UBL3-201ENST00000380680 NOB1Q9ULX3 412 aaKnown RBP22.06■■□□□ 1.12
UBL3-201ENST00000380680 SHANK2Q9UPX8 1470 aa22.06■■□□□ 1.12
UBL3-201ENST00000380680 RILPL2Q969X0 211 aa22.06■■□□□ 1.12
UBL3-201ENST00000380680 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
UBL3-201ENST00000380680 CHMP3Q9Y3E7 222 aa22.06■■□□□ 1.12
UBL3-201ENST00000380680 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
UBL3-201ENST00000380680 TWISTNBQ3B726 338 aaPredicted RBP22.05■■□□□ 1.12
UBL3-201ENST00000380680 AMER1Q5JTC6 1135 aaPredicted RBP22.05■■□□□ 1.12
UBL3-201ENST00000380680 SKAP1Q86WV1 359 aa22.05■■□□□ 1.12
UBL3-201ENST00000380680 ABTB2Q8N961 1025 aa22.05■■□□□ 1.12
UBL3-201ENST00000380680 DUSP27Q5VZP5 1158 aa22.04■■□□□ 1.12
UBL3-201ENST00000380680 NUDT16Q96DE0 195 aaKnown RBP22.04■■□□□ 1.12
UBL3-201ENST00000380680 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
UBL3-201ENST00000380680 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
UBL3-201ENST00000380680 FCHSD2O94868 740 aa22.01■■□□□ 1.11
UBL3-201ENST00000380680 ZRSR1Q15695 479 aaKnown RBP22.01■■□□□ 1.11
UBL3-201ENST00000380680 TEX14Q8IWB6 1497 aa22.01■■□□□ 1.11
UBL3-201ENST00000380680 GOLGA6L4A6NEF3 574 aa22.01■■□□□ 1.11
UBL3-201ENST00000380680 ST18O60284 1047 aa22.01■■□□□ 1.11
UBL3-201ENST00000380680 ADGRL2O95490 1459 aa22.01■■□□□ 1.11
UBL3-201ENST00000380680 GPATCH3Q96I76 525 aa22.01■■□□□ 1.11
UBL3-201ENST00000380680 C1orf115Q9H7X2 142 aa22■■□□□ 1.11
UBL3-201ENST00000380680 NPHP1O15259 732 aa22■■□□□ 1.11
UBL3-201ENST00000380680 C22orf23Q9BZE7 217 aa22■■□□□ 1.11
UBL3-201ENST00000380680 WDR7Q9Y4E6 1490 aa22■■□□□ 1.11
UBL3-201ENST00000380680 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
UBL3-201ENST00000380680 THUMPD2Q9BTF0 503 aaKnown RBP21.99■■□□□ 1.11
UBL3-201ENST00000380680 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
UBL3-201ENST00000380680 MVPQ14764 893 aaKnown RBP21.99■■□□□ 1.11
UBL3-201ENST00000380680 PARD3Q8TEW0 1356 aa21.98■■□□□ 1.11
UBL3-201ENST00000380680 CT47B1P0C2W7 299 aaPredicted RBP21.98■■□□□ 1.11
UBL3-201ENST00000380680 C9orf78Q9NZ63 289 aaPredicted RBP21.98■■□□□ 1.11
UBL3-201ENST00000380680 A2MP01023 1474 aa21.97■■□□□ 1.11
UBL3-201ENST00000380680 RARSP54136 660 aaKnown RBP21.96■■□□□ 1.11
UBL3-201ENST00000380680 ESCO1Q5FWF5 840 aa21.96■■□□□ 1.11
UBL3-201ENST00000380680 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
UBL3-201ENST00000380680 NME9Q86XW9 330 aa21.95■■□□□ 1.1
UBL3-201ENST00000380680 GAS2L2Q8NHY3 880 aa21.95■■□□□ 1.1
UBL3-201ENST00000380680 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
UBL3-201ENST00000380680 GSE1Q14687 1217 aa21.94■■□□□ 1.1
UBL3-201ENST00000380680 DNTTIP2Q5QJE6 756 aaKnown RBP21.94■■□□□ 1.1
UBL3-201ENST00000380680 GOLGA6L3A6NEY3 463 aa21.94■■□□□ 1.1
UBL3-201ENST00000380680 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
UBL3-201ENST00000380680 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
UBL3-201ENST00000380680 GORABQ5T7V8 394 aa21.94■■□□□ 1.1
UBL3-201ENST00000380680 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
UBL3-201ENST00000380680 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
UBL3-201ENST00000380680 NINLQ9Y2I6 1382 aa21.93■■□□□ 1.1
UBL3-201ENST00000380680 PTMSP20962 102 aa21.92■■□□□ 1.1
UBL3-201ENST00000380680 NAP1L5Q96NT1 182 aaPredicted RBP21.92■■□□□ 1.1
UBL3-201ENST00000380680 REC8O95072 547 aa21.92■■□□□ 1.1
UBL3-201ENST00000380680 SSH1Q8WYL5 1049 aa21.92■■□□□ 1.1
UBL3-201ENST00000380680 NKTRP30414 1462 aaKnown RBP21.91■■□□□ 1.1
UBL3-201ENST00000380680 UHRF1BP1Q6BDS2 1440 aa21.91■■□□□ 1.1
UBL3-201ENST00000380680 SLC4A2P04920 1241 aa21.91■■□□□ 1.1
UBL3-201ENST00000380680 NFKBIBQ15653 356 aa21.91■■□□□ 1.1
UBL3-201ENST00000380680 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
UBL3-201ENST00000380680 NLRP2Q9NX02 1062 aa21.91■■□□□ 1.1
UBL3-201ENST00000380680 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
UBL3-201ENST00000380680 NEXNQ0ZGT2 675 aa21.9■■□□□ 1.1
UBL3-201ENST00000380680 TAF7LQ5H9L4 462 aa21.9■■□□□ 1.1
UBL3-201ENST00000380680 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
UBL3-201ENST00000380680 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
UBL3-201ENST00000380680 WASLO00401 505 aaPredicted RBP21.9■■□□□ 1.1
UBL3-201ENST00000380680 FBLN1P23142 703 aa21.89■■□□□ 1.09
UBL3-201ENST00000380680 CCDC9Q9Y3X0 531 aaKnown RBP21.89■■□□□ 1.09
UBL3-201ENST00000380680 GPRASP1Q5JY77 1395 aa21.89■■□□□ 1.09
UBL3-201ENST00000380680 KDM6BO15054 1643 aa21.89■■□□□ 1.09
UBL3-201ENST00000380680 TMEM57Q8N5G2 664 aa21.88■■□□□ 1.09
UBL3-201ENST00000380680 ATF3P18847 181 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms