RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.88
COL4A3BP-203ENST00000380494 RRP12Q5JTH9 1297 aaKnown RBP20.58■□□□□ 0.88
COL4A3BP-203ENST00000380494 H0YHG0 523 aa20.57■□□□□ 0.88
COL4A3BP-203ENST00000380494 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
COL4A3BP-203ENST00000380494 WASHC2CQ9Y4E1 1318 aa20.57■□□□□ 0.88
COL4A3BP-203ENST00000380494 PDZRN3Q9UPQ7 1066 aa20.56■□□□□ 0.88
COL4A3BP-203ENST00000380494 MYOM3Q5VTT5 1437 aa20.56■□□□□ 0.88
COL4A3BP-203ENST00000380494 GCC1Q96CN9 775 aa20.56■□□□□ 0.88
COL4A3BP-203ENST00000380494 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
COL4A3BP-203ENST00000380494 PDE4CQ08493 712 aa20.56■□□□□ 0.88
COL4A3BP-203ENST00000380494 KIF21BO75037 1637 aa20.55■□□□□ 0.88
COL4A3BP-203ENST00000380494 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
COL4A3BP-203ENST00000380494 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
COL4A3BP-203ENST00000380494 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
COL4A3BP-203ENST00000380494 PDCP20941 246 aa20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 PDCL2Q8N4E4 241 aa20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 TRDNQ13061 729 aa20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 CCDC112Q8NEF3 446 aa20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 C9orf78Q9NZ63 289 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-203ENST00000380494 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.88
COL4A3BP-203ENST00000380494 MCM4P33991 863 aa20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 CCDC192P0DO97 292 aa20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 SAFBQ15424 915 aaKnown RBP eCLIP20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 ZSCAN30Q86W11 494 aa20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 NGDNQ8NEJ9 315 aaKnown RBP20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 LRRC9Q6ZRR7 1453 aa20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 G3BP1Q13283 466 aaKnown RBP eCLIP20.51■□□□□ 0.87
COL4A3BP-203ENST00000380494 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
COL4A3BP-203ENST00000380494 CNTROBQ8N137 903 aa20.5■□□□□ 0.87
COL4A3BP-203ENST00000380494 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
COL4A3BP-203ENST00000380494 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
COL4A3BP-203ENST00000380494 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
COL4A3BP-203ENST00000380494 MYO6Q9UM54 1294 aa20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 SMARCE1Q969G3 411 aa20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 SDF4Q9BRK5 362 aa20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 KINO60870 393 aaKnown RBP20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 AEBP1Q8IUX7 1158 aa20.49■□□□□ 0.87
COL4A3BP-203ENST00000380494 PDILTQ8N807 584 aa20.48■□□□□ 0.87
COL4A3BP-203ENST00000380494 MLECQ14165 292 aa20.48■□□□□ 0.87
COL4A3BP-203ENST00000380494 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
COL4A3BP-203ENST00000380494 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
COL4A3BP-203ENST00000380494 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
COL4A3BP-203ENST00000380494 WDR33Q9C0J8 1336 aaKnown RBP20.47■□□□□ 0.87
COL4A3BP-203ENST00000380494 SMC2O95347 1197 aa20.47■□□□□ 0.87
COL4A3BP-203ENST00000380494 CT47B1P0C2W7 299 aaPredicted RBP20.47■□□□□ 0.87
COL4A3BP-203ENST00000380494 TSPYL1Q9H0U9 437 aa20.47■□□□□ 0.87
COL4A3BP-203ENST00000380494 FBXW7Q969H0 707 aa20.47■□□□□ 0.87
COL4A3BP-203ENST00000380494 ZNF396Q96N95 335 aaPredicted RBP20.46■□□□□ 0.87
COL4A3BP-203ENST00000380494 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
COL4A3BP-203ENST00000380494 USP8P40818 1118 aa20.46■□□□□ 0.87
COL4A3BP-203ENST00000380494 HIP1O00291 1037 aa20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 ERLIN1O75477 346 aa20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 NEK4P51957 841 aa20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 FKBP5Q13451 457 aaPredicted RBP20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 CDCA7LQ96GN5 454 aa20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 ERICH2A1L162 156 aa20.45■□□□□ 0.86
COL4A3BP-203ENST00000380494 NAP1L1P55209 391 aaKnown RBP20.44■□□□□ 0.86
COL4A3BP-203ENST00000380494 VPS53Q5VIR6 699 aa20.44■□□□□ 0.86
COL4A3BP-203ENST00000380494 NFXL1Q6ZNB6 911 aa20.44■□□□□ 0.86
COL4A3BP-203ENST00000380494 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
COL4A3BP-203ENST00000380494 TEFQ10587 303 aa20.44■□□□□ 0.86
COL4A3BP-203ENST00000380494 AMOTL1Q8IY63 956 aa20.44■□□□□ 0.86
COL4A3BP-203ENST00000380494 MSH5O43196 834 aa20.43■□□□□ 0.86
COL4A3BP-203ENST00000380494 FILIP1LQ4L180 1135 aa20.43■□□□□ 0.86
COL4A3BP-203ENST00000380494 PDCL3Q9H2J4 239 aa20.43■□□□□ 0.86
COL4A3BP-203ENST00000380494 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
COL4A3BP-203ENST00000380494 CCDC27Q2M243 656 aa20.42■□□□□ 0.86
COL4A3BP-203ENST00000380494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.41■□□□□ 0.86
COL4A3BP-203ENST00000380494 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
COL4A3BP-203ENST00000380494 SPC24Q8NBT2 197 aa20.41■□□□□ 0.86
COL4A3BP-203ENST00000380494 PDIA4P13667 645 aaKnown RBP20.41■□□□□ 0.86
COL4A3BP-203ENST00000380494 EID1Q9Y6B2 187 aa20.41■□□□□ 0.86
COL4A3BP-203ENST00000380494 KIAA0754O94854 1291 aa20.4■□□□□ 0.86
COL4A3BP-203ENST00000380494 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
COL4A3BP-203ENST00000380494 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
COL4A3BP-203ENST00000380494 GNAI3P08754 354 aa20.4■□□□□ 0.86
COL4A3BP-203ENST00000380494 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
COL4A3BP-203ENST00000380494 RALYLQ86SE5 291 aaKnown RBP20.39■□□□□ 0.86
COL4A3BP-203ENST00000380494 CBFA2T2O43439 604 aa20.39■□□□□ 0.85
COL4A3BP-203ENST00000380494 TNMDQ9H2S6 317 aa20.39■□□□□ 0.85
COL4A3BP-203ENST00000380494 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
COL4A3BP-203ENST00000380494 NUTM2DQ5VT03 806 aaPredicted RBP20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 UBTFL1P0CB47 393 aaPredicted RBP20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 XBP1P17861 261 aa20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 PNISRQ8TF01 805 aaKnown RBP20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 ANKRD1Q15327 319 aa20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 AXDND1Q5T1B0 1012 aaPredicted RBP20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 KIF2AO00139 706 aaPredicted RBP20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 FIBPO43427 364 aa20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 DACH1Q9UI36 760 aa20.38■□□□□ 0.85
COL4A3BP-203ENST00000380494 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
COL4A3BP-203ENST00000380494 TSPYL4Q9UJ04 414 aa20.37■□□□□ 0.85
COL4A3BP-203ENST00000380494 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
COL4A3BP-203ENST00000380494 ZMYND15Q9H091 742 aa20.37■□□□□ 0.85
COL4A3BP-203ENST00000380494 BCL11BQ9C0K0 894 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms