RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 SATB1Q01826 763 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 HDAC1Q13547 482 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-202ENST00000379066 ACRBPQ8NEB7 543 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 CALRP27797 417 aaKnown RBP4.45□□□□□ -1.7
PRKD3-202ENST00000379066 IRX5P78411 483 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-202ENST00000379066 GEMIN8Q9NWZ8 242 aaKnown RBP4.45□□□□□ -1.7
PRKD3-202ENST00000379066 PSME1Q06323 249 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 GOLGA2Q08379 1002 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 GRIN2BQ13224 1484 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 KIF20AO95235 890 aa4.45□□□□□ -1.7
PRKD3-202ENST00000379066 GTF2A1P52655 376 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-202ENST00000379066 ANKLE2Q86XL3 938 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 STRN4Q9NRL3 753 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 TSPOAP1O95153 1857 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 DCAF11Q8TEB1 546 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 VTI1AQ96AJ9 217 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 PPME1Q9Y570 386 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 ARHGAP5Q13017 1502 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 PAX3P23760 479 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 HSPA2P54652 639 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 CEP83Q9Y592 693 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 BIRC2Q13490 618 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 TNIKQ9UKE5 1360 aa4.44□□□□□ -1.7
PRKD3-202ENST00000379066 SF3A1Q15459 793 aaKnown RBP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 NGLY1Q96IV0 654 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 FRMD4BQ9Y2L6 1034 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 FGD5Q6ZNL6 1462 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 RIOK3O14730 519 aaKnown RBP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 EIF4G2P78344 907 aaKnown RBP eCLIP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 NRDCO43847 1150 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 ZCRB1Q8TBF4 217 aaKnown RBP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 SH3BP5O60239 455 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 CBX1P83916 185 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 MICAL1Q8TDZ2 1067 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 MYCBPQ99417 103 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 GTPBP4Q9BZE4 634 aaKnown RBP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 RHBDL3P58872 404 aa4.43□□□□□ -1.7
PRKD3-202ENST00000379066 HMGN5P82970 282 aaKnown RBP4.43□□□□□ -1.7
PRKD3-202ENST00000379066 ANKRD62A6NC57 917 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 PDE3BQ13370 1112 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 ZKSCAN2Q63HK3 967 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 KIAA1211Q6ZU35 1233 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 LTV1Q96GA3 475 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 C8orf37Q96NL8 207 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 MTA3Q9BTC8 594 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 TRERF1Q96PN7 1200 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 RBM28Q9NW13 759 aaKnown RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 BIN2Q9UBW5 565 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 EPB41L2O43491 1005 aaKnown RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 GRM1Q13255 1194 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 NBPF10Q6P3W6 841 aaKnown RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.42□□□□□ -1.76e-9■■■■■ 134.6
PRKD3-202ENST00000379066 ESCO1Q5FWF5 840 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 CCDC94Q9BW85 323 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 TEX14Q8IWB6 1497 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 MAP4K4O95819 1239 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 CLCN1P35523 988 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 L1TD1Q5T7N2 865 aaKnown RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 HSCBQ8IWL3 235 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 KCNV2Q8TDN2 545 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 SUDS3Q9H7L9 328 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-202ENST00000379066 ZRANB1Q9UGI0 708 aa4.42□□□□□ -1.7
PRKD3-202ENST00000379066 CCDC172P0C7W6 258 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 YY1AP1Q9H869 796 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 KAT6BQ8WYB5 2073 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 MECOMQ03112 1051 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 LRCH2Q5VUJ6 765 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 KRI1Q8N9T8 703 aaKnown RBP4.41□□□□□ -1.7
PRKD3-202ENST00000379066 HIRIP3Q9BW71 556 aaPredicted RBP4.41□□□□□ -1.7
PRKD3-202ENST00000379066 TOMM22Q9NS69 142 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 LMNB1P20700 586 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 RBM5P52756 815 aaKnown RBP eCLIP4.41□□□□□ -1.7
PRKD3-202ENST00000379066 MYBPC2Q14324 1141 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 CT47A1Q5JQC4 288 aaPredicted RBP4.41□□□□□ -1.7
PRKD3-202ENST00000379066 KRBA2Q6ZNG9 492 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 RAI14Q9P0K7 980 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 ZNF853P0CG23 659 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 FAM161AQ3B820 660 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 CCDC125Q86Z20 511 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 THEMISQ8N1K5 641 aaPredicted RBP4.41□□□□□ -1.7
PRKD3-202ENST00000379066 TMX1Q9H3N1 280 aa4.41□□□□□ -1.7
PRKD3-202ENST00000379066 ZFYVE27Q5T4F4 411 aa4.4□□□□□ -1.7
PRKD3-202ENST00000379066 TXNDC2Q86VQ3 553 aa4.4□□□□□ -1.7
PRKD3-202ENST00000379066 TPM3P06753 285 aa4.4□□□□□ -1.7
PRKD3-202ENST00000379066 SMC4Q9NTJ3 1288 aa4.4□□□□□ -1.7
PRKD3-202ENST00000379066 RAPGEF3O95398 923 aa4.4□□□□□ -1.7
PRKD3-202ENST00000379066 ZNF662Q6ZS27 426 aa4.4□□□□□ -1.7
PRKD3-202ENST00000379066 PRPF38AQ8NAV1 312 aaKnown RBP4.4□□□□□ -1.7
PRKD3-202ENST00000379066 ZKSCAN8Q15776 578 aaPredicted RBP4.4□□□□□ -1.71
PRKD3-202ENST00000379066 DDX46Q7L014 1031 aaKnown RBP4.4□□□□□ -1.71
PRKD3-202ENST00000379066 FAM212AQ96EL1 285 aa4.4□□□□□ -1.71
PRKD3-202ENST00000379066 NCAPD3P42695 1498 aa4.4□□□□□ -1.71
PRKD3-202ENST00000379066 STK10O94804 968 aaKnown RBP4.4□□□□□ -1.71
PRKD3-202ENST00000379066 CCT2P78371 535 aaKnown RBP4.4□□□□□ -1.71
PRKD3-202ENST00000379066 IRF5Q13568 498 aa4.4□□□□□ -1.71
PRKD3-202ENST00000379066 WDR78Q5VTH9 848 aa4.4□□□□□ -1.71
PRKD3-202ENST00000379066 NCKAP5LQ9HCH0 1330 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 CAPN15O75808 1086 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 CEBPAP49715 358 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-202ENST00000379066 CCDC184Q52MB2 194 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms