RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 PIP4K2BP78356 416 aa28.58■■■□□ 2.17
RER1-204ENST00000378518 NBPF8Q3BBV2 869 aa28.58■■■□□ 2.17
RER1-204ENST00000378518 POGKQ9P215 609 aa28.58■■■□□ 2.17
RER1-204ENST00000378518 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
RER1-204ENST00000378518 PLEKHH1Q9ULM0 1364 aa28.57■■■□□ 2.16
RER1-204ENST00000378518 CDC42BPGQ6DT37 1551 aa28.56■■■□□ 2.16
RER1-204ENST00000378518 RALGAPBQ86X10 1494 aa28.56■■■□□ 2.16
RER1-204ENST00000378518 ILDR1Q86SU0 546 aaPredicted RBP28.55■■■□□ 2.16
RER1-204ENST00000378518 ROBO1Q9Y6N7 1651 aa28.51■■■□□ 2.16
RER1-204ENST00000378518 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
RER1-204ENST00000378518 SLAIN2Q9P270 581 aa28.51■■■□□ 2.15
RER1-204ENST00000378518 ADGRB2O60241 1585 aa28.5■■■□□ 2.15
RER1-204ENST00000378518 GPRASP1Q5JY77 1395 aa28.5■■■□□ 2.15
RER1-204ENST00000378518 MST1RQ04912 1400 aa28.48■■■□□ 2.15
RER1-204ENST00000378518 FMN2Q9NZ56 1722 aa28.48■■■□□ 2.15
RER1-204ENST00000378518 EIF3AQ14152 1382 aaKnown RBP28.47■■■□□ 2.15
RER1-204ENST00000378518 QRICH2Q9H0J4 1663 aa28.46■■■□□ 2.15
RER1-204ENST00000378518 CARD11Q9BXL7 1154 aa28.46■■■□□ 2.15
RER1-204ENST00000378518 MINK1Q8N4C8 1332 aaPredicted RBP28.43■■■□□ 2.14
RER1-204ENST00000378518 CENPJQ9HC77 1338 aaPredicted RBP28.43■■■□□ 2.14
RER1-204ENST00000378518 C1orf167Q5SNV9 1468 aa28.41■■■□□ 2.14
RER1-204ENST00000378518 HIRIP3Q9BW71 556 aaPredicted RBP28.38■■■□□ 2.13
RER1-204ENST00000378518 PHLPP1O60346 1717 aa28.37■■■□□ 2.13
RER1-204ENST00000378518 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
RER1-204ENST00000378518 BRINP3Q76B58 766 aa28.34■■■□□ 2.13
RER1-204ENST00000378518 TULP4Q9NRJ4 1543 aa28.33■■■□□ 2.13
RER1-204ENST00000378518 NHSL1Q5SYE7 1610 aa28.33■■■□□ 2.13
RER1-204ENST00000378518 NUTM2FA1L443 756 aa28.33■■■□□ 2.13
RER1-204ENST00000378518 WASLO00401 505 aaPredicted RBP28.33■■■□□ 2.13
RER1-204ENST00000378518 AHDC1Q5TGY3 1603 aaPredicted RBP28.32■■■□□ 2.12
RER1-204ENST00000378518 KIF1AQ12756 1690 aa28.32■■■□□ 2.12
RER1-204ENST00000378518 ITSN1Q15811 1721 aa28.32■■■□□ 2.12
RER1-204ENST00000378518 HSPA1LP34931 641 aa28.32■■■□□ 2.12
RER1-204ENST00000378518 ANKARQ7Z5J8 1434 aa28.32■■■□□ 2.12
RER1-204ENST00000378518 USP32Q8NFA0 1604 aa28.31■■■□□ 2.12
RER1-204ENST00000378518 ESCO1Q5FWF5 840 aa28.29■■■□□ 2.12
RER1-204ENST00000378518 ORAI2Q96SN7 254 aa28.28■■■□□ 2.12
RER1-204ENST00000378518 CDK19Q9BWU1 502 aa28.26■■■□□ 2.11
RER1-204ENST00000378518 SBNO2Q9Y2G9 1366 aa28.25■■■□□ 2.11
RER1-204ENST00000378518 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
RER1-204ENST00000378518 USP47Q96K76 1375 aa28.24■■■□□ 2.11
RER1-204ENST00000378518 EVC2Q86UK5 1308 aa28.24■■■□□ 2.11
RER1-204ENST00000378518 ATP7BP35670 1465 aa28.22■■■□□ 2.11
RER1-204ENST00000378518 SRPK2P78362 688 aaKnown RBP28.22■■■□□ 2.11
RER1-204ENST00000378518 TOPAZ1Q8N9V7 1692 aa28.22■■■□□ 2.11
RER1-204ENST00000378518 PHF8Q9UPP1 1060 aa28.2■■■□□ 2.1
RER1-204ENST00000378518 NPHP3Q7Z494 1330 aa28.19■■■□□ 2.1
RER1-204ENST00000378518 PRR36Q9H6K5 1346 aa28.19■■■□□ 2.1
RER1-204ENST00000378518 SLC24A1O60721 1099 aa28.19■■■□□ 2.1
RER1-204ENST00000378518 NUDT16Q96DE0 195 aaKnown RBP28.19■■■□□ 2.1
RER1-204ENST00000378518 ST20-MTHFSA0A0A6YYL1 179 aa28.18■■■□□ 2.1
RER1-204ENST00000378518 DDX17Q92841 729 aaKnown RBP28.16■■■□□ 2.1
RER1-204ENST00000378518 CABP2Q9NPB3 220 aa28.16■■■□□ 2.1
RER1-204ENST00000378518 FOXO3O43524 673 aa28.14■■■□□ 2.1
RER1-204ENST00000378518 CCDC61Q9Y6R9 512 aa28.14■■■□□ 2.1
RER1-204ENST00000378518 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
RER1-204ENST00000378518 PMFBP1Q8TBY8 1022 aa28.13■■■□□ 2.09
RER1-204ENST00000378518 LRRC59Q96AG4 307 aaKnown RBP28.12■■■□□ 2.09
RER1-204ENST00000378518 SOS2Q07890 1332 aaPredicted RBP28.12■■■□□ 2.09
RER1-204ENST00000378518 JCADQ9P266 1359 aa28.11■■■□□ 2.09
RER1-204ENST00000378518 PXDNQ92626 1479 aa28.11■■■□□ 2.09
RER1-204ENST00000378518 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
RER1-204ENST00000378518 PPIP5K1Q6PFW1 1433 aa28.1■■■□□ 2.09
RER1-204ENST00000378518 EIF4G2P78344 907 aaKnown RBP eCLIP28.1■■■□□ 2.09
RER1-204ENST00000378518 TESK2Q96S53 571 aa28.1■■■□□ 2.09
RER1-204ENST00000378518 NGDNQ8NEJ9 315 aaKnown RBP28.09■■■□□ 2.09
RER1-204ENST00000378518 PSME1Q06323 249 aa28.08■■■□□ 2.09
RER1-204ENST00000378518 KRT28Q7Z3Y7 464 aa28.07■■■□□ 2.08
RER1-204ENST00000378518 TMF1P82094 1093 aa28.06■■■□□ 2.08
RER1-204ENST00000378518 XPCQ01831 940 aaPredicted RBP28.06■■■□□ 2.08
RER1-204ENST00000378518 PLEKHG3A1L390 1219 aa28.05■■■□□ 2.08
RER1-204ENST00000378518 TRPM3Q9HCF6 1732 aaPredicted RBP28.04■■■□□ 2.08
RER1-204ENST00000378518 POLR3AO14802 1390 aaPredicted RBP28.03■■■□□ 2.08
RER1-204ENST00000378518 PUS7Q96PZ0 661 aaKnown RBP28.03■■■□□ 2.08
RER1-204ENST00000378518 SBNO1A3KN83 1393 aa28.01■■■□□ 2.07
RER1-204ENST00000378518 ACEP12821 1306 aa28.01■■■□□ 2.07
RER1-204ENST00000378518 HSPA5P11021 654 aaKnown RBP28.01■■■□□ 2.07
RER1-204ENST00000378518 CDCA8Q53HL2 280 aa28.01■■■□□ 2.07
RER1-204ENST00000378518 AKAP12Q02952 1782 aa28.01■■■□□ 2.07
RER1-204ENST00000378518 PNPLA6Q8IY17 1366 aa28■■■□□ 2.07
RER1-204ENST00000378518 COL22A1Q8NFW1 1626 aaPredicted RBP28■■■□□ 2.07
RER1-204ENST00000378518 CABP1Q9NZU7 370 aa28■■■□□ 2.07
RER1-204ENST00000378518 TNS3Q68CZ2 1445 aa28■■■□□ 2.07
RER1-204ENST00000378518 DISP3Q9P2K9 1392 aa27.99■■■□□ 2.07
RER1-204ENST00000378518 SPATA31A6Q5VVP1 1343 aa27.99■■■□□ 2.07
RER1-204ENST00000378518 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
RER1-204ENST00000378518 MED1Q15648 1581 aaPredicted RBP27.97■■■□□ 2.07
RER1-204ENST00000378518 ALS2Q96Q42 1657 aa27.96■■■□□ 2.07
RER1-204ENST00000378518 TMC1Q8TDI8 760 aa27.95■■■□□ 2.06
RER1-204ENST00000378518 ARHGEF10O15013 1369 aa27.95■■■□□ 2.06
RER1-204ENST00000378518 NINLQ9Y2I6 1382 aa27.95■■■□□ 2.06
RER1-204ENST00000378518 PAK3O75914 559 aaPredicted RBP27.93■■■□□ 2.06
RER1-204ENST00000378518 BRD4O60885 1362 aaPredicted RBP27.93■■■□□ 2.06
RER1-204ENST00000378518 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
RER1-204ENST00000378518 LMOD2Q6P5Q4 547 aa27.92■■■□□ 2.06
RER1-204ENST00000378518 ZNF692Q9BU19 519 aaPredicted RBP27.91■■■□□ 2.06
RER1-204ENST00000378518 USP6P35125 1406 aa27.91■■■□□ 2.06
RER1-204ENST00000378518 ZEB1P37275 1124 aaPredicted RBP27.9■■■□□ 2.06
RER1-204ENST00000378518 HDGFL2Q7Z4V5 671 aaPredicted RBP27.89■■■□□ 2.06
RER1-204ENST00000378518 NUTM2BA6NNL0 878 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms