RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 PRAM1Q96QH2 718 aa33.22■■■□□ 2.91
RPP38-201ENST00000378197 BRINP3Q76B58 766 aa33.2■■■□□ 2.91
RPP38-201ENST00000378197 C1orf167Q5SNV9 1468 aa33.18■■■□□ 2.9
RPP38-201ENST00000378197 SAFB2Q14151 953 aaKnown RBP eCLIP33.18■■■□□ 2.9
RPP38-201ENST00000378197 POGKQ9P215 609 aa33.18■■■□□ 2.9
RPP38-201ENST00000378197 TONSLQ96HA7 1378 aa33.17■■■□□ 2.9
RPP38-201ENST00000378197 NBPF1Q3BBV0 1214 aa33.17■■■□□ 2.9
RPP38-201ENST00000378197 PHLPP1O60346 1717 aa33.17■■■□□ 2.9
RPP38-201ENST00000378197 AHDC1Q5TGY3 1603 aaPredicted RBP33.13■■■□□ 2.89
RPP38-201ENST00000378197 ARHGEF28Q8N1W1 1705 aaKnown RBP33.13■■■□□ 2.89
RPP38-201ENST00000378197 TRPM1Q7Z4N2 1603 aa33.1■■■□□ 2.89
RPP38-201ENST00000378197 FMN2Q9NZ56 1722 aa33.1■■■□□ 2.89
RPP38-201ENST00000378197 COL16A1Q07092 1604 aaPredicted RBP33.09■■■□□ 2.89
RPP38-201ENST00000378197 ORAI2Q96SN7 254 aa33.08■■■□□ 2.89
RPP38-201ENST00000378197 NUTM2FA1L443 756 aa33.07■■■□□ 2.88
RPP38-201ENST00000378197 NHSL1Q5SYE7 1610 aa33.07■■■□□ 2.88
RPP38-201ENST00000378197 ADGRB2O60241 1585 aa33.06■■■□□ 2.88
RPP38-201ENST00000378197 NBPF8Q3BBV2 869 aa33.05■■■□□ 2.88
RPP38-201ENST00000378197 MINK1Q8N4C8 1332 aaPredicted RBP33.05■■■□□ 2.88
RPP38-201ENST00000378197 HIRIP3Q9BW71 556 aaPredicted RBP33.03■■■□□ 2.88
RPP38-201ENST00000378197 ESCO1Q5FWF5 840 aa33.02■■■□□ 2.88
RPP38-201ENST00000378197 DDX17Q92841 729 aaKnown RBP33.02■■■□□ 2.88
RPP38-201ENST00000378197 CLSPNQ9HAW4 1339 aa33.01■■■□□ 2.87
RPP38-201ENST00000378197 ROCK2O75116 1388 aaKnown RBP33■■■□□ 2.87
RPP38-201ENST00000378197 MED1Q15648 1581 aaPredicted RBP32.99■■■□□ 2.87
RPP38-201ENST00000378197 JCADQ9P266 1359 aa32.98■■■□□ 2.87
RPP38-201ENST00000378197 RGPD8O14715 1765 aaPredicted RBP32.95■■■□□ 2.86
RPP38-201ENST00000378197 DISP3Q9P2K9 1392 aa32.94■■■□□ 2.86
RPP38-201ENST00000378197 WASLO00401 505 aaPredicted RBP32.93■■■□□ 2.86
RPP38-201ENST00000378197 CCER1Q8TC90 406 aaPredicted RBP32.93■■■□□ 2.86
RPP38-201ENST00000378197 CENPJQ9HC77 1338 aaPredicted RBP32.92■■■□□ 2.86
RPP38-201ENST00000378197 USP32Q8NFA0 1604 aa32.92■■■□□ 2.86
RPP38-201ENST00000378197 GPRASP1Q5JY77 1395 aa32.92■■■□□ 2.86
RPP38-201ENST00000378197 ANKARQ7Z5J8 1434 aa32.92■■■□□ 2.86
RPP38-201ENST00000378197 RALGAPBQ86X10 1494 aa32.91■■■□□ 2.86
RPP38-201ENST00000378197 KIF1AQ12756 1690 aa32.91■■■□□ 2.86
RPP38-201ENST00000378197 EIF3AQ14152 1382 aaKnown RBP32.9■■■□□ 2.86
RPP38-201ENST00000378197 SOS2Q07890 1332 aaPredicted RBP32.9■■■□□ 2.86
RPP38-201ENST00000378197 NPHP3Q7Z494 1330 aa32.9■■■□□ 2.86
RPP38-201ENST00000378197 SHPRHQ149N8 1683 aa32.89■■■□□ 2.86
RPP38-201ENST00000378197 FOXO3O43524 673 aa32.89■■■□□ 2.86
RPP38-201ENST00000378197 LRRC59Q96AG4 307 aaKnown RBP32.89■■■□□ 2.86
RPP38-201ENST00000378197 TULP4Q9NRJ4 1543 aa32.89■■■□□ 2.86
RPP38-201ENST00000378197 QRICH2Q9H0J4 1663 aa32.87■■■□□ 2.85
RPP38-201ENST00000378197 PHF8Q9UPP1 1060 aa32.86■■■□□ 2.85
RPP38-201ENST00000378197 PRR36Q9H6K5 1346 aa32.86■■■□□ 2.85
RPP38-201ENST00000378197 CARD11Q9BXL7 1154 aa32.85■■■□□ 2.85
RPP38-201ENST00000378197 PXDNQ92626 1479 aa32.84■■■□□ 2.85
RPP38-201ENST00000378197 SPATA31A6Q5VVP1 1343 aa32.83■■■□□ 2.85
RPP38-201ENST00000378197 XPCQ01831 940 aaPredicted RBP32.83■■■□□ 2.85
RPP38-201ENST00000378197 CDK19Q9BWU1 502 aa32.83■■■□□ 2.85
RPP38-201ENST00000378197 TIMELESSQ9UNS1 1208 aa32.83■■■□□ 2.85
RPP38-201ENST00000378197 PNPLA6Q8IY17 1366 aa32.81■■■□□ 2.84
RPP38-201ENST00000378197 PMFBP1Q8TBY8 1022 aa32.8■■■□□ 2.84
RPP38-201ENST00000378197 ATP7BP35670 1465 aa32.79■■■□□ 2.84
RPP38-201ENST00000378197 NUDT16Q96DE0 195 aaKnown RBP32.78■■■□□ 2.84
RPP38-201ENST00000378197 PHF23Q9BUL5 403 aaPredicted RBP32.77■■■□□ 2.84
RPP38-201ENST00000378197 LRP6O75581 1613 aa32.77■■■□□ 2.84
RPP38-201ENST00000378197 ITSN1Q15811 1721 aa32.76■■■□□ 2.83
RPP38-201ENST00000378197 KRT28Q7Z3Y7 464 aa32.75■■■□□ 2.83
RPP38-201ENST00000378197 NUTM2BA6NNL0 878 aaPredicted RBP32.73■■■□□ 2.83
RPP38-201ENST00000378197 NUTM2EB1AL46 878 aaPredicted RBP32.73■■■□□ 2.83
RPP38-201ENST00000378197 SRPK2P78362 688 aaKnown RBP32.73■■■□□ 2.83
RPP38-201ENST00000378197 NUTM2AQ8IVF1 878 aaPredicted RBP32.73■■■□□ 2.83
RPP38-201ENST00000378197 PSME1Q06323 249 aa32.71■■■□□ 2.83
RPP38-201ENST00000378197 TOPAZ1Q8N9V7 1692 aa32.71■■■□□ 2.83
RPP38-201ENST00000378197 CABP2Q9NPB3 220 aa32.7■■■□□ 2.83
RPP38-201ENST00000378197 CCDC61Q9Y6R9 512 aa32.69■■■□□ 2.82
RPP38-201ENST00000378197 COL22A1Q8NFW1 1626 aaPredicted RBP32.68■■■□□ 2.82
RPP38-201ENST00000378197 SPATA31A3Q5VYP0 1347 aa32.68■■■□□ 2.82
RPP38-201ENST00000378197 EVC2Q86UK5 1308 aa32.68■■■□□ 2.82
RPP38-201ENST00000378197 NGDNQ8NEJ9 315 aaKnown RBP32.67■■■□□ 2.82
RPP38-201ENST00000378197 MEX3CQ5U5Q3 659 aaKnown RBP32.67■■■□□ 2.82
RPP38-201ENST00000378197 SBNO2Q9Y2G9 1366 aa32.65■■■□□ 2.82
RPP38-201ENST00000378197 SBNO1A3KN83 1393 aa32.65■■■□□ 2.82
RPP38-201ENST00000378197 TNS3Q68CZ2 1445 aa32.64■■■□□ 2.82
RPP38-201ENST00000378197 RGS17Q9UGC6 210 aaPredicted RBP32.62■■■□□ 2.81
RPP38-201ENST00000378197 TRPM3Q9HCF6 1732 aaPredicted RBP32.62■■■□□ 2.81
RPP38-201ENST00000378197 PPIP5K1Q6PFW1 1433 aa32.62■■■□□ 2.81
RPP38-201ENST00000378197 PLEKHG3A1L390 1219 aa32.61■■■□□ 2.81
RPP38-201ENST00000378197 POLR3AO14802 1390 aaPredicted RBP32.59■■■□□ 2.81
RPP38-201ENST00000378197 ACEP12821 1306 aa32.59■■■□□ 2.81
RPP38-201ENST00000378197 ILDR2Q71H61 639 aa32.58■■■□□ 2.81
RPP38-201ENST00000378197 LMOD2Q6P5Q4 547 aa32.57■■■□□ 2.8
RPP38-201ENST00000378197 ST20-MTHFSA0A0A6YYL1 179 aa32.56■■■□□ 2.8
RPP38-201ENST00000378197 ADAMTS2O95450 1211 aa32.56■■■□□ 2.8
RPP38-201ENST00000378197 ARHGEF10O15013 1369 aa32.55■■■□□ 2.8
RPP38-201ENST00000378197 USP47Q96K76 1375 aa32.55■■■□□ 2.8
RPP38-201ENST00000378197 CABP1Q9NZU7 370 aa32.54■■■□□ 2.8
RPP38-201ENST00000378197 ALS2Q96Q42 1657 aa32.53■■■□□ 2.8
RPP38-201ENST00000378197 ATAD2Q6PL18 1390 aa32.51■■■□□ 2.79
RPP38-201ENST00000378197 PAK3O75914 559 aaPredicted RBP32.51■■■□□ 2.79
RPP38-201ENST00000378197 C8orf37Q96NL8 207 aa32.51■■■□□ 2.79
RPP38-201ENST00000378197 TESK2Q96S53 571 aa32.51■■■□□ 2.79
RPP38-201ENST00000378197 PLEKHG5O94827 1062 aa32.48■■■□□ 2.79
RPP38-201ENST00000378197 POTEAQ6S8J7 498 aa32.48■■■□□ 2.79
RPP38-201ENST00000378197 CABLES1Q8TDN4 633 aa32.48■■■□□ 2.79
RPP38-201ENST00000378197 AFF2P51816 1311 aa32.47■■■□□ 2.79
RPP38-201ENST00000378197 ABCA3Q99758 1704 aa32.45■■■□□ 2.79
RPP38-201ENST00000378197 MARF1Q9Y4F3 1742 aaKnown RBP32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms