RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RICTORQ6R327 1708 aa21.43■■□□□ 1.02
PCDHA1-201ENST00000378133 NEURL4Q96JN8 1562 aa21.43■■□□□ 1.02
PCDHA1-201ENST00000378133 RGS3P49796 1198 aa21.43■■□□□ 1.02
PCDHA1-201ENST00000378133 MLH3Q9UHC1 1453 aa21.43■■□□□ 1.02
PCDHA1-201ENST00000378133 TRAK1Q9UPV9 953 aa21.42■■□□□ 1.02
PCDHA1-201ENST00000378133 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
PCDHA1-201ENST00000378133 CENPJQ9HC77 1338 aaPredicted RBP21.41■■□□□ 1.02
PCDHA1-201ENST00000378133 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
PCDHA1-201ENST00000378133 NOS1P29475 1434 aa21.4■■□□□ 1.02
PCDHA1-201ENST00000378133 EFCAB6Q5THR3 1501 aa21.39■■□□□ 1.02
PCDHA1-201ENST00000378133 PLEKHG5O94827 1062 aa21.39■■□□□ 1.02
PCDHA1-201ENST00000378133 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.02
PCDHA1-201ENST00000378133 MROH2AA6NES4 1674 aa21.38■■□□□ 1.01
PCDHA1-201ENST00000378133 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
PCDHA1-201ENST00000378133 NEUROD2Q15784 382 aa21.38■■□□□ 1.01
PCDHA1-201ENST00000378133 MORC1Q86VD1 984 aa21.38■■□□□ 1.01
PCDHA1-201ENST00000378133 CFAP65Q6ZU64 1925 aaKnown RBP21.38■■□□□ 1.01
PCDHA1-201ENST00000378133 FAM43AQ8N2R8 423 aa21.37■■□□□ 1.01
PCDHA1-201ENST00000378133 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
PCDHA1-201ENST00000378133 POLR3AO14802 1390 aaPredicted RBP21.37■■□□□ 1.01
PCDHA1-201ENST00000378133 IFT172Q9UG01 1749 aa21.37■■□□□ 1.01
PCDHA1-201ENST00000378133 TMEM132EQ6IEE7 984 aa21.36■■□□□ 1.01
PCDHA1-201ENST00000378133 SBNO2Q9Y2G9 1366 aa21.36■■□□□ 1.01
PCDHA1-201ENST00000378133 NRXN1Q9ULB1 1477 aa21.36■■□□□ 1.01
PCDHA1-201ENST00000378133 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
PCDHA1-201ENST00000378133 IGHDP01880 384 aa21.35■■□□□ 1.01
PCDHA1-201ENST00000378133 GGT6Q6P531 493 aa21.35■■□□□ 1.01
PCDHA1-201ENST00000378133 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
PCDHA1-201ENST00000378133 DIP2CQ9Y2E4 1556 aa21.34■■□□□ 1.01
PCDHA1-201ENST00000378133 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
PCDHA1-201ENST00000378133 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
PCDHA1-201ENST00000378133 CANXP27824 592 aaKnown RBP21.32■■□□□ 1
PCDHA1-201ENST00000378133 PANK1Q8TE04 598 aa21.32■■□□□ 1
PCDHA1-201ENST00000378133 MYO3AQ8NEV4 1616 aa21.32■■□□□ 1
PCDHA1-201ENST00000378133 PDE3AQ14432 1141 aa21.32■■□□□ 1
PCDHA1-201ENST00000378133 COG6Q9Y2V7 657 aa21.32■■□□□ 1
PCDHA1-201ENST00000378133 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
PCDHA1-201ENST00000378133 ADGRB3O60242 1522 aa21.3■■□□□ 1
PCDHA1-201ENST00000378133 CGNL1Q0VF96 1302 aa21.3■■□□□ 1
PCDHA1-201ENST00000378133 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
PCDHA1-201ENST00000378133 RUNDC1Q96C34 613 aa21.29■■□□□ 1
PCDHA1-201ENST00000378133 LMTK2Q8IWU2 1503 aa21.29■■□□□ 1
PCDHA1-201ENST00000378133 NPATQ14207 1427 aa21.29■■□□□ 1
PCDHA1-201ENST00000378133 MTHFSP49914 203 aa21.28■■□□□ 1
PCDHA1-201ENST00000378133 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
PCDHA1-201ENST00000378133 SETBP1Q9Y6X0 1596 aa21.28■■□□□ 1
PCDHA1-201ENST00000378133 CLUAP1Q96AJ1 413 aa21.28■■□□□ 1
PCDHA1-201ENST00000378133 POGKQ9P215 609 aa21.26■□□□□ 0.99
PCDHA1-201ENST00000378133 RARSP54136 660 aaKnown RBP21.25■□□□□ 0.99
PCDHA1-201ENST00000378133 USP19O94966 1318 aa21.24■□□□□ 0.99
PCDHA1-201ENST00000378133 SHPRHQ149N8 1683 aa21.24■□□□□ 0.99
PCDHA1-201ENST00000378133 QRICH2Q9H0J4 1663 aa21.24■□□□□ 0.99
PCDHA1-201ENST00000378133 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
PCDHA1-201ENST00000378133 BECN1Q14457 450 aa21.23■□□□□ 0.99
PCDHA1-201ENST00000378133 PPLO60437 1756 aa21.23■□□□□ 0.99
PCDHA1-201ENST00000378133 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
PCDHA1-201ENST00000378133 NINLQ9Y2I6 1382 aa21.22■□□□□ 0.99
PCDHA1-201ENST00000378133 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
PCDHA1-201ENST00000378133 TNNQ9UQP3 1299 aa21.21■□□□□ 0.99
PCDHA1-201ENST00000378133 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
PCDHA1-201ENST00000378133 WDR63Q8IWG1 891 aa21.21■□□□□ 0.99
PCDHA1-201ENST00000378133 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
PCDHA1-201ENST00000378133 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.98
PCDHA1-201ENST00000378133 PODXL2Q9NZ53 605 aa21.2■□□□□ 0.98
PCDHA1-201ENST00000378133 ZC3H13Q5T200 1668 aaKnown RBP21.2■□□□□ 0.98
PCDHA1-201ENST00000378133 SEC24BO95487 1268 aa21.2■□□□□ 0.98
PCDHA1-201ENST00000378133 RLBP1P12271 317 aa21.19■□□□□ 0.98
PCDHA1-201ENST00000378133 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
PCDHA1-201ENST00000378133 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
PCDHA1-201ENST00000378133 EVC2Q86UK5 1308 aa21.18■□□□□ 0.98
PCDHA1-201ENST00000378133 CABP2Q9NPB3 220 aa21.18■□□□□ 0.98
PCDHA1-201ENST00000378133 IQSEC2Q5JU85 1478 aa21.18■□□□□ 0.98
PCDHA1-201ENST00000378133 U2AF1L5P0DN76 240 aaPredicted RBP21.18■□□□□ 0.98
PCDHA1-201ENST00000378133 U2AF1Q01081 240 aaKnown RBP eCLIP21.18■□□□□ 0.98
PCDHA1-201ENST00000378133 L1TD1Q5T7N2 865 aaKnown RBP21.17■□□□□ 0.98
PCDHA1-201ENST00000378133 PCDHB15Q9Y5E8 787 aa21.17■□□□□ 0.98
PCDHA1-201ENST00000378133 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
PCDHA1-201ENST00000378133 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
PCDHA1-201ENST00000378133 CCDC27Q2M243 656 aa21.15■□□□□ 0.98
PCDHA1-201ENST00000378133 ABCC3O15438 1527 aa21.15■□□□□ 0.98
PCDHA1-201ENST00000378133 VIRMAQ69YN4 1812 aaKnown RBP21.15■□□□□ 0.98
PCDHA1-201ENST00000378133 PMFBP1Q8TBY8 1022 aa21.14■□□□□ 0.97
PCDHA1-201ENST00000378133 RRAGDQ9NQL2 400 aaPredicted RBP21.14■□□□□ 0.97
PCDHA1-201ENST00000378133 ANKRD36BQ8N2N9 1353 aa21.14■□□□□ 0.97
PCDHA1-201ENST00000378133 SIGLEC1Q9BZZ2 1709 aa21.13■□□□□ 0.97
PCDHA1-201ENST00000378133 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
PCDHA1-201ENST00000378133 ZMYND15Q9H091 742 aa21.12■□□□□ 0.97
PCDHA1-201ENST00000378133 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
PCDHA1-201ENST00000378133 STK26Q9P289 416 aa21.12■□□□□ 0.97
PCDHA1-201ENST00000378133 USP32Q8NFA0 1604 aa21.11■□□□□ 0.97
PCDHA1-201ENST00000378133 TULP4Q9NRJ4 1543 aa21.11■□□□□ 0.97
PCDHA1-201ENST00000378133 CAMSAP1Q5T5Y3 1602 aa21.11■□□□□ 0.97
PCDHA1-201ENST00000378133 ANTXR1Q9H6X2 564 aa21.1■□□□□ 0.97
PCDHA1-201ENST00000378133 REREQ9P2R6 1566 aa21.1■□□□□ 0.97
PCDHA1-201ENST00000378133 AAMPQ13685 434 aa21.1■□□□□ 0.97
PCDHA1-201ENST00000378133 IDI1Q13907 227 aa21.1■□□□□ 0.97
PCDHA1-201ENST00000378133 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
PCDHA1-201ENST00000378133 ARHGEF40Q8TER5 1519 aa21.09■□□□□ 0.97
PCDHA1-201ENST00000378133 UPF2Q9HAU5 1272 aaKnown RBP21.09■□□□□ 0.97
PCDHA1-201ENST00000378133 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms