RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
BEST1-201ENST00000378043 GLI2P10070 1586 aa14.25□□□□□ -0.13
BEST1-201ENST00000378043 USP32Q8NFA0 1604 aa14.25□□□□□ -0.13
BEST1-201ENST00000378043 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
BEST1-201ENST00000378043 ARHGEF28Q8N1W1 1705 aaKnown RBP14.24□□□□□ -0.13
BEST1-201ENST00000378043 RAPGEF3O95398 923 aa14.23□□□□□ -0.13
BEST1-201ENST00000378043 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
BEST1-201ENST00000378043 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
BEST1-201ENST00000378043 TULP4Q9NRJ4 1543 aa14.23□□□□□ -0.13
BEST1-201ENST00000378043 IQSEC2Q5JU85 1478 aa14.22□□□□□ -0.13
BEST1-201ENST00000378043 C8orf34Q49A92 452 aa14.22□□□□□ -0.13
BEST1-201ENST00000378043 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
BEST1-201ENST00000378043 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
BEST1-201ENST00000378043 MTHFSP49914 203 aa14.21□□□□□ -0.13
BEST1-201ENST00000378043 DIP2CQ9Y2E4 1556 aa14.21□□□□□ -0.14
BEST1-201ENST00000378043 RUNDC1Q96C34 613 aa14.21□□□□□ -0.14
BEST1-201ENST00000378043 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.14
BEST1-201ENST00000378043 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
BEST1-201ENST00000378043 IGHDP01880 384 aa14.2□□□□□ -0.14
BEST1-201ENST00000378043 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
BEST1-201ENST00000378043 LAS1LQ9Y4W2 734 aaKnown RBP14.2□□□□□ -0.14
BEST1-201ENST00000378043 NEO1Q92859 1461 aa14.19□□□□□ -0.14
BEST1-201ENST00000378043 CGNL1Q0VF96 1302 aa14.19□□□□□ -0.14
BEST1-201ENST00000378043 PDE3AQ14432 1141 aa14.19□□□□□ -0.14
BEST1-201ENST00000378043 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
BEST1-201ENST00000378043 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
BEST1-201ENST00000378043 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
BEST1-201ENST00000378043 MYO5BQ9ULV0 1848 aa14.18□□□□□ -0.14
BEST1-201ENST00000378043 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
BEST1-201ENST00000378043 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
BEST1-201ENST00000378043 RGS3P49796 1198 aa14.18□□□□□ -0.14
BEST1-201ENST00000378043 IDI1Q13907 227 aa14.18□□□□□ -0.14
BEST1-201ENST00000378043 PANK1Q8TE04 598 aa14.18□□□□□ -0.14
BEST1-201ENST00000378043 RTL5Q5HYW3 569 aaPredicted RBP14.17□□□□□ -0.14
BEST1-201ENST00000378043 RICTORQ6R327 1708 aa14.17□□□□□ -0.14
BEST1-201ENST00000378043 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
BEST1-201ENST00000378043 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
BEST1-201ENST00000378043 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
BEST1-201ENST00000378043 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
BEST1-201ENST00000378043 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
BEST1-201ENST00000378043 NINLQ9Y2I6 1382 aa14.15□□□□□ -0.14
BEST1-201ENST00000378043 WDR63Q8IWG1 891 aa14.15□□□□□ -0.14
BEST1-201ENST00000378043 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
BEST1-201ENST00000378043 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
BEST1-201ENST00000378043 ZFYVE9O95405 1425 aa14.14□□□□□ -0.15
BEST1-201ENST00000378043 VIRMAQ69YN4 1812 aaKnown RBP14.14□□□□□ -0.15
BEST1-201ENST00000378043 CCDC27Q2M243 656 aa14.14□□□□□ -0.15
BEST1-201ENST00000378043 NSD2O96028 1365 aa14.14□□□□□ -0.15
BEST1-201ENST00000378043 YEATS2Q9ULM3 1422 aa14.14□□□□□ -0.15
BEST1-201ENST00000378043 NEFMP07197 916 aa14.14□□□□□ -0.15
BEST1-201ENST00000378043 SLC4A3P48751 1232 aa14.13□□□□□ -0.15
BEST1-201ENST00000378043 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
BEST1-201ENST00000378043 TNNQ9UQP3 1299 aa14.13□□□□□ -0.15
BEST1-201ENST00000378043 RLBP1P12271 317 aa14.13□□□□□ -0.15
BEST1-201ENST00000378043 FRAT1Q92837 279 aaPredicted RBP14.13□□□□□ -0.15
BEST1-201ENST00000378043 SENP3Q9H4L4 574 aaPredicted RBP14.13□□□□□ -0.15
BEST1-201ENST00000378043 ADGRB2O60241 1585 aa14.12□□□□□ -0.15
BEST1-201ENST00000378043 TMEM131LA2VDJ0 1609 aa14.12□□□□□ -0.15
BEST1-201ENST00000378043 A0A1W2PP64 1363 aa14.12□□□□□ -0.15
BEST1-201ENST00000378043 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
BEST1-201ENST00000378043 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
BEST1-201ENST00000378043 PREX1Q8TCU6 1659 aa14.11□□□□□ -0.15
BEST1-201ENST00000378043 ABCC11Q96J66 1382 aa14.11□□□□□ -0.15
BEST1-201ENST00000378043 SLC52A1Q9NWF4 448 aa14.11□□□□□ -0.15
BEST1-201ENST00000378043 STK26Q9P289 416 aa14.11□□□□□ -0.15
BEST1-201ENST00000378043 PTPRMP28827 1452 aa14.11□□□□□ -0.15
BEST1-201ENST00000378043 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
BEST1-201ENST00000378043 BCL2L13Q9BXK5 485 aa14.11□□□□□ -0.15
BEST1-201ENST00000378043 U2AF1L5P0DN76 240 aaPredicted RBP14.1□□□□□ -0.15
BEST1-201ENST00000378043 U2AF1Q01081 240 aaKnown RBP eCLIP14.1□□□□□ -0.15
BEST1-201ENST00000378043 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
BEST1-201ENST00000378043 PCDHB15Q9Y5E8 787 aa14.09□□□□□ -0.15
BEST1-201ENST00000378043 USP19O94966 1318 aa14.09□□□□□ -0.15
BEST1-201ENST00000378043 CD163L1Q9NR16 1453 aa14.09□□□□□ -0.15
BEST1-201ENST00000378043 GGNBP2Q9H3C7 697 aa14.08□□□□□ -0.15
BEST1-201ENST00000378043 COL3A1P02461 1466 aaPredicted RBP14.08□□□□□ -0.16
BEST1-201ENST00000378043 SRPK2P78362 688 aaKnown RBP14.08□□□□□ -0.16
BEST1-201ENST00000378043 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
BEST1-201ENST00000378043 NLRP1Q9C000 1473 aa14.07□□□□□ -0.16
BEST1-201ENST00000378043 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
BEST1-201ENST00000378043 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
BEST1-201ENST00000378043 FYB1O15117 783 aa14.06□□□□□ -0.16
BEST1-201ENST00000378043 MINK1Q8N4C8 1332 aaPredicted RBP14.06□□□□□ -0.16
BEST1-201ENST00000378043 SEC24BO95487 1268 aa14.06□□□□□ -0.16
BEST1-201ENST00000378043 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
BEST1-201ENST00000378043 PRAM1Q96QH2 718 aa14.06□□□□□ -0.16
BEST1-201ENST00000378043 MYH16Q9H6N6 1097 aa14.06□□□□□ -0.16
BEST1-201ENST00000378043 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
BEST1-201ENST00000378043 MAPK8IP3Q9UPT6 1336 aa14.06□□□□□ -0.16
BEST1-201ENST00000378043 AAMPQ13685 434 aa14.05□□□□□ -0.16
BEST1-201ENST00000378043 TSR2Q969E8 191 aaKnown RBP14.05□□□□□ -0.16
BEST1-201ENST00000378043 TRIM35Q9UPQ4 493 aa14.05□□□□□ -0.16
BEST1-201ENST00000378043 ATAD2Q6PL18 1390 aa14.04□□□□□ -0.16
BEST1-201ENST00000378043 MED14O60244 1454 aa14.04□□□□□ -0.16
BEST1-201ENST00000378043 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
BEST1-201ENST00000378043 NFKBIBQ15653 356 aa14.04□□□□□ -0.16
BEST1-201ENST00000378043 ALKQ9UM73 1620 aa14.03□□□□□ -0.16
BEST1-201ENST00000378043 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
BEST1-201ENST00000378043 PMFBP1Q8TBY8 1022 aa14.03□□□□□ -0.16
BEST1-201ENST00000378043 TERF2IPQ9NYB0 399 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms