RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 UBAP1LF5GYI3 381 aa28.41■■■□□ 2.14
DDR1-228ENST00000376575 C14orf37Q86TY3 774 aa28.39■■■□□ 2.14
DDR1-228ENST00000376575 CADPS2Q86UW7 1296 aa28.39■■■□□ 2.14
DDR1-228ENST00000376575 CDC42BPGQ6DT37 1551 aa28.37■■■□□ 2.13
DDR1-228ENST00000376575 POGKQ9P215 609 aa28.36■■■□□ 2.13
DDR1-228ENST00000376575 ATF3P18847 181 aa28.35■■■□□ 2.13
DDR1-228ENST00000376575 ADGRB2O60241 1585 aa28.35■■■□□ 2.13
DDR1-228ENST00000376575 CARD11Q9BXL7 1154 aa28.33■■■□□ 2.13
DDR1-228ENST00000376575 SLAIN2Q9P270 581 aa28.33■■■□□ 2.13
DDR1-228ENST00000376575 MST1RQ04912 1400 aa28.33■■■□□ 2.13
DDR1-228ENST00000376575 SAFB2Q14151 953 aaKnown RBP eCLIP28.3■■■□□ 2.12
DDR1-228ENST00000376575 CENPJQ9HC77 1338 aaPredicted RBP28.28■■■□□ 2.12
DDR1-228ENST00000376575 FMN2Q9NZ56 1722 aa28.27■■■□□ 2.12
DDR1-228ENST00000376575 EIF3AQ14152 1382 aaKnown RBP28.26■■■□□ 2.12
DDR1-228ENST00000376575 C1orf167Q5SNV9 1468 aa28.26■■■□□ 2.11
DDR1-228ENST00000376575 ILDR1Q86SU0 546 aaPredicted RBP28.25■■■□□ 2.11
DDR1-228ENST00000376575 QRICH2Q9H0J4 1663 aa28.25■■■□□ 2.11
DDR1-228ENST00000376575 MINK1Q8N4C8 1332 aaPredicted RBP28.24■■■□□ 2.11
DDR1-228ENST00000376575 PIP4K2BP78356 416 aa28.24■■■□□ 2.11
DDR1-228ENST00000376575 ROBO1Q9Y6N7 1651 aa28.23■■■□□ 2.11
DDR1-228ENST00000376575 SBNO2Q9Y2G9 1366 aa28.22■■■□□ 2.11
DDR1-228ENST00000376575 WASLO00401 505 aaPredicted RBP28.21■■■□□ 2.11
DDR1-228ENST00000376575 HIRIP3Q9BW71 556 aaPredicted RBP28.21■■■□□ 2.11
DDR1-228ENST00000376575 BRINP3Q76B58 766 aa28.19■■■□□ 2.1
DDR1-228ENST00000376575 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
DDR1-228ENST00000376575 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
DDR1-228ENST00000376575 USP47Q96K76 1375 aa28.17■■■□□ 2.1
DDR1-228ENST00000376575 TULP4Q9NRJ4 1543 aa28.16■■■□□ 2.1
DDR1-228ENST00000376575 SCAF1Q9H7N4 1312 aaKnown RBP28.15■■■□□ 2.1
DDR1-228ENST00000376575 RGPD8O14715 1765 aaPredicted RBP28.14■■■□□ 2.1
DDR1-228ENST00000376575 CDK19Q9BWU1 502 aa28.14■■■□□ 2.1
DDR1-228ENST00000376575 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
DDR1-228ENST00000376575 TESK2Q96S53 571 aa28.13■■■□□ 2.09
DDR1-228ENST00000376575 ORAI2Q96SN7 254 aa28.13■■■□□ 2.09
DDR1-228ENST00000376575 PRR36Q9H6K5 1346 aa28.13■■■□□ 2.09
DDR1-228ENST00000376575 AHDC1Q5TGY3 1603 aaPredicted RBP28.12■■■□□ 2.09
DDR1-228ENST00000376575 ATP7BP35670 1465 aa28.11■■■□□ 2.09
DDR1-228ENST00000376575 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
DDR1-228ENST00000376575 NHSL1Q5SYE7 1610 aa28.1■■■□□ 2.09
DDR1-228ENST00000376575 HSPA1LP34931 641 aa28.09■■■□□ 2.09
DDR1-228ENST00000376575 ESCO1Q5FWF5 840 aa28.08■■■□□ 2.09
DDR1-228ENST00000376575 EVC2Q86UK5 1308 aa28.08■■■□□ 2.09
DDR1-228ENST00000376575 NUDT16Q96DE0 195 aaKnown RBP28.06■■■□□ 2.08
DDR1-228ENST00000376575 KIF1AQ12756 1690 aa28.06■■■□□ 2.08
DDR1-228ENST00000376575 SLC24A1O60721 1099 aa28.05■■■□□ 2.08
DDR1-228ENST00000376575 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
DDR1-228ENST00000376575 PHLPP1O60346 1717 aa28.03■■■□□ 2.08
DDR1-228ENST00000376575 ITSN1Q15811 1721 aa28.03■■■□□ 2.08
DDR1-228ENST00000376575 COL16A1Q07092 1604 aaPredicted RBP28.03■■■□□ 2.08
DDR1-228ENST00000376575 PUS7Q96PZ0 661 aaKnown RBP28.02■■■□□ 2.08
DDR1-228ENST00000376575 CABP2Q9NPB3 220 aa28.02■■■□□ 2.08
DDR1-228ENST00000376575 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
DDR1-228ENST00000376575 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
DDR1-228ENST00000376575 EIF4G2P78344 907 aaKnown RBP eCLIP28.01■■■□□ 2.078e-8■■■■■ 39.6
DDR1-228ENST00000376575 SRPK2P78362 688 aaKnown RBP28.01■■■□□ 2.07
DDR1-228ENST00000376575 SOS2Q07890 1332 aaPredicted RBP28■■■□□ 2.07
DDR1-228ENST00000376575 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
DDR1-228ENST00000376575 DDX17Q92841 729 aaKnown RBP27.99■■■□□ 2.07
DDR1-228ENST00000376575 NPHP3Q7Z494 1330 aa27.98■■■□□ 2.07
DDR1-228ENST00000376575 PXDNQ92626 1479 aa27.98■■■□□ 2.07
DDR1-228ENST00000376575 FOXO3O43524 673 aa27.97■■■□□ 2.07
DDR1-228ENST00000376575 HSPA5P11021 654 aaKnown RBP27.97■■■□□ 2.07
DDR1-228ENST00000376575 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
DDR1-228ENST00000376575 ATAD2Q6PL18 1390 aa27.96■■■□□ 2.07
DDR1-228ENST00000376575 PMFBP1Q8TBY8 1022 aa27.95■■■□□ 2.06
DDR1-228ENST00000376575 DISP3Q9P2K9 1392 aa27.95■■■□□ 2.06
DDR1-228ENST00000376575 PPIP5K1Q6PFW1 1433 aa27.93■■■□□ 2.06
DDR1-228ENST00000376575 TMF1P82094 1093 aa27.93■■■□□ 2.06
DDR1-228ENST00000376575 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
DDR1-228ENST00000376575 LRRC59Q96AG4 307 aaKnown RBP27.89■■■□□ 2.06
DDR1-228ENST00000376575 ACEP12821 1306 aa27.89■■■□□ 2.05
DDR1-228ENST00000376575 KRT28Q7Z3Y7 464 aa27.88■■■□□ 2.05
DDR1-228ENST00000376575 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
DDR1-228ENST00000376575 TRPM3Q9HCF6 1732 aaPredicted RBP27.87■■■□□ 2.05
DDR1-228ENST00000376575 SBNO1A3KN83 1393 aa27.86■■■□□ 2.05
DDR1-228ENST00000376575 JCADQ9P266 1359 aa27.86■■■□□ 2.05
DDR1-228ENST00000376575 NGDNQ8NEJ9 315 aaKnown RBP27.86■■■□□ 2.05
DDR1-228ENST00000376575 SHPRHQ149N8 1683 aa27.86■■■□□ 2.05
DDR1-228ENST00000376575 XPCQ01831 940 aaPredicted RBP27.85■■■□□ 2.05
DDR1-228ENST00000376575 PSME1Q06323 249 aa27.85■■■□□ 2.05
DDR1-228ENST00000376575 CDCA8Q53HL2 280 aa27.85■■■□□ 2.05
DDR1-228ENST00000376575 CPSF1Q10570 1443 aaKnown RBP27.84■■■□□ 2.05
DDR1-228ENST00000376575 NINLQ9Y2I6 1382 aa27.84■■■□□ 2.05
DDR1-228ENST00000376575 CD163L1Q9NR16 1453 aa27.83■■■□□ 2.05
DDR1-228ENST00000376575 SPATA31A3Q5VYP0 1347 aa27.83■■■□□ 2.05
DDR1-228ENST00000376575 AKAP12Q02952 1782 aa27.82■■■□□ 2.04
DDR1-228ENST00000376575 PNPLA6Q8IY17 1366 aa27.82■■■□□ 2.04
DDR1-228ENST00000376575 SSH2Q76I76 1423 aa27.81■■■□□ 2.04
DDR1-228ENST00000376575 SLC12A5Q9H2X9 1139 aa27.8■■■□□ 2.04
DDR1-228ENST00000376575 BRD4O60885 1362 aaPredicted RBP27.8■■■□□ 2.04
DDR1-228ENST00000376575 TNS3Q68CZ2 1445 aa27.8■■■□□ 2.04
DDR1-228ENST00000376575 ALS2Q96Q42 1657 aa27.79■■■□□ 2.04
DDR1-228ENST00000376575 COL22A1Q8NFW1 1626 aaPredicted RBP27.79■■■□□ 2.04
DDR1-228ENST00000376575 USP6P35125 1406 aa27.79■■■□□ 2.04
DDR1-228ENST00000376575 ZNF692Q9BU19 519 aaPredicted RBP27.79■■■□□ 2.04
DDR1-228ENST00000376575 C11orf95C9JLR9 678 aaPredicted RBP27.78■■■□□ 2.04
DDR1-228ENST00000376575 MON2Q7Z3U7 1717 aa27.75■■■□□ 2.03
DDR1-228ENST00000376575 MYOM1P52179 1685 aa27.75■■■□□ 2.03
DDR1-228ENST00000376575 SPATA31A6Q5VVP1 1343 aa27.75■■■□□ 2.03
DDR1-228ENST00000376575 TMC1Q8TDI8 760 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms