RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 DIAPH1O60610 1272 aaKnown RBP16.48■□□□□ 0.23
CUL4A-203ENST00000375441 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
CUL4A-203ENST00000375441 DUOX2Q9NRD8 1548 aa16.48■□□□□ 0.23
CUL4A-203ENST00000375441 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
CUL4A-203ENST00000375441 INSRP06213 1382 aa16.47■□□□□ 0.23
CUL4A-203ENST00000375441 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
CUL4A-203ENST00000375441 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
CUL4A-203ENST00000375441 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
CUL4A-203ENST00000375441 EIF2AK4Q9P2K8 1649 aaKnown RBP16.46■□□□□ 0.23
CUL4A-203ENST00000375441 PCDHB15Q9Y5E8 787 aa16.46■□□□□ 0.22
CUL4A-203ENST00000375441 PIK3C2GO75747 1445 aa16.46■□□□□ 0.22
CUL4A-203ENST00000375441 DDX11L8A8MPP1 907 aa16.45■□□□□ 0.22
CUL4A-203ENST00000375441 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
CUL4A-203ENST00000375441 SEC24BO95487 1268 aa16.45■□□□□ 0.22
CUL4A-203ENST00000375441 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
CUL4A-203ENST00000375441 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
CUL4A-203ENST00000375441 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
CUL4A-203ENST00000375441 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
CUL4A-203ENST00000375441 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
CUL4A-203ENST00000375441 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
CUL4A-203ENST00000375441 SOX12O15370 315 aa16.43■□□□□ 0.22
CUL4A-203ENST00000375441 PLCH2O75038 1416 aa16.43■□□□□ 0.22
CUL4A-203ENST00000375441 ATF7IPQ6VMQ6 1270 aa16.42■□□□□ 0.22
CUL4A-203ENST00000375441 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
CUL4A-203ENST00000375441 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
CUL4A-203ENST00000375441 TRAK2O60296 914 aa16.42■□□□□ 0.22
CUL4A-203ENST00000375441 KDM5DQ9BY66 1539 aa16.41■□□□□ 0.22
CUL4A-203ENST00000375441 ARHGEF5Q12774 1597 aa16.41■□□□□ 0.22
CUL4A-203ENST00000375441 HMOX1P09601 288 aa16.41■□□□□ 0.22
CUL4A-203ENST00000375441 RLBP1P12271 317 aa16.41■□□□□ 0.22
CUL4A-203ENST00000375441 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
CUL4A-203ENST00000375441 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
CUL4A-203ENST00000375441 MCM4P33991 863 aa16.39■□□□□ 0.21
CUL4A-203ENST00000375441 TMPOP42166 694 aaKnown RBP16.39■□□□□ 0.21
CUL4A-203ENST00000375441 ABCA8O94911 1581 aa16.39■□□□□ 0.21
CUL4A-203ENST00000375441 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
CUL4A-203ENST00000375441 RAPGEF3O95398 923 aa16.38■□□□□ 0.21
CUL4A-203ENST00000375441 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
CUL4A-203ENST00000375441 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
CUL4A-203ENST00000375441 TPRNQ4KMQ1 711 aa16.38■□□□□ 0.21
CUL4A-203ENST00000375441 TMEM57Q8N5G2 664 aa16.38■□□□□ 0.21
CUL4A-203ENST00000375441 NOS1P29475 1434 aa16.38■□□□□ 0.21
CUL4A-203ENST00000375441 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
CUL4A-203ENST00000375441 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
CUL4A-203ENST00000375441 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
CUL4A-203ENST00000375441 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
CUL4A-203ENST00000375441 PTMSP20962 102 aa16.37■□□□□ 0.21
CUL4A-203ENST00000375441 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
CUL4A-203ENST00000375441 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
CUL4A-203ENST00000375441 TRIM27P14373 513 aa16.36■□□□□ 0.21
CUL4A-203ENST00000375441 CFAP44Q96MT7 982 aa16.36■□□□□ 0.21
CUL4A-203ENST00000375441 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
CUL4A-203ENST00000375441 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
CUL4A-203ENST00000375441 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
CUL4A-203ENST00000375441 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
CUL4A-203ENST00000375441 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
CUL4A-203ENST00000375441 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
CUL4A-203ENST00000375441 C14orf93Q9H972 538 aaKnown RBP16.35■□□□□ 0.21
CUL4A-203ENST00000375441 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
CUL4A-203ENST00000375441 MRE11P49959 708 aa16.34■□□□□ 0.21
CUL4A-203ENST00000375441 MSNP26038 577 aaKnown RBP16.33■□□□□ 0.21
CUL4A-203ENST00000375441 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.2
CUL4A-203ENST00000375441 MAST1Q9Y2H9 1570 aa16.33■□□□□ 0.2
CUL4A-203ENST00000375441 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
CUL4A-203ENST00000375441 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
CUL4A-203ENST00000375441 SKOR2Q2VWA4 1001 aaPredicted RBP16.33■□□□□ 0.2
CUL4A-203ENST00000375441 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
CUL4A-203ENST00000375441 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
CUL4A-203ENST00000375441 GNAI1P63096 354 aa16.32■□□□□ 0.2
CUL4A-203ENST00000375441 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
CUL4A-203ENST00000375441 CHD1LQ86WJ1 897 aa16.32■□□□□ 0.2
CUL4A-203ENST00000375441 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
CUL4A-203ENST00000375441 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
CUL4A-203ENST00000375441 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
CUL4A-203ENST00000375441 FANCAO15360 1455 aa16.31■□□□□ 0.2
CUL4A-203ENST00000375441 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
CUL4A-203ENST00000375441 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
CUL4A-203ENST00000375441 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
CUL4A-203ENST00000375441 COG3Q96JB2 828 aa16.29■□□□□ 0.2
CUL4A-203ENST00000375441 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
CUL4A-203ENST00000375441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.23e-8■■■□□ 17.7
CUL4A-203ENST00000375441 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
CUL4A-203ENST00000375441 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
CUL4A-203ENST00000375441 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
CUL4A-203ENST00000375441 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
CUL4A-203ENST00000375441 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
CUL4A-203ENST00000375441 ST18O60284 1047 aa16.28■□□□□ 0.2
CUL4A-203ENST00000375441 GCC1Q96CN9 775 aa16.27■□□□□ 0.2
CUL4A-203ENST00000375441 CDC45O75419 566 aa16.27■□□□□ 0.19
CUL4A-203ENST00000375441 MCCP23508 829 aa16.26■□□□□ 0.19
CUL4A-203ENST00000375441 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
CUL4A-203ENST00000375441 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
CUL4A-203ENST00000375441 HMMRO75330 724 aa16.26■□□□□ 0.19
CUL4A-203ENST00000375441 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
CUL4A-203ENST00000375441 FCHSD2O94868 740 aa16.25■□□□□ 0.19
CUL4A-203ENST00000375441 GRPEL1Q9HAV7 217 aa16.25■□□□□ 0.19
CUL4A-203ENST00000375441 ABCC2Q92887 1545 aa16.25■□□□□ 0.19
CUL4A-203ENST00000375441 HDAC1Q13547 482 aaPredicted RBP16.24■□□□□ 0.19
CUL4A-203ENST00000375441 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
CUL4A-203ENST00000375441 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms