RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 A2ML1A8K2U0 1454 aa14.47□□□□□ -0.09
CCDC40-203ENST00000374877 NLRP1Q9C000 1473 aa14.47□□□□□ -0.09
CCDC40-203ENST00000374877 ADGRF5Q8IZF2 1346 aa14.47□□□□□ -0.09
CCDC40-203ENST00000374877 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-203ENST00000374877 GSE1Q14687 1217 aa14.47□□□□□ -0.09
CCDC40-203ENST00000374877 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
CCDC40-203ENST00000374877 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
CCDC40-203ENST00000374877 C3P01024 1663 aa14.46□□□□□ -0.09
CCDC40-203ENST00000374877 TESK2Q96S53 571 aa14.46□□□□□ -0.09
CCDC40-203ENST00000374877 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.1
CCDC40-203ENST00000374877 TMF1P82094 1093 aa14.46□□□□□ -0.1
CCDC40-203ENST00000374877 CENPQQ7L2Z9 268 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-203ENST00000374877 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
CCDC40-203ENST00000374877 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-203ENST00000374877 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
CCDC40-203ENST00000374877 RGS3P49796 1198 aa14.44□□□□□ -0.1
CCDC40-203ENST00000374877 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
CCDC40-203ENST00000374877 IQGAP1P46940 1657 aa14.44□□□□□ -0.1
CCDC40-203ENST00000374877 FAM161AQ3B820 660 aa14.43□□□□□ -0.1
CCDC40-203ENST00000374877 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
CCDC40-203ENST00000374877 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
CCDC40-203ENST00000374877 MYO5BQ9ULV0 1848 aa14.42□□□□□ -0.1
CCDC40-203ENST00000374877 FRAT1Q92837 279 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-203ENST00000374877 INSRP06213 1382 aa14.42□□□□□ -0.1
CCDC40-203ENST00000374877 DUSP27Q5VZP5 1158 aa14.41□□□□□ -0.1
CCDC40-203ENST00000374877 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-203ENST00000374877 EIF3AQ14152 1382 aaKnown RBP14.41□□□□□ -0.1
CCDC40-203ENST00000374877 PLEKHH1Q9ULM0 1364 aa14.41□□□□□ -0.1
CCDC40-203ENST00000374877 RIMS2Q9UQ26 1411 aa14.41□□□□□ -0.1
CCDC40-203ENST00000374877 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
CCDC40-203ENST00000374877 KNSTRNQ9Y448 316 aa14.41□□□□□ -0.1
CCDC40-203ENST00000374877 CFAP70Q5T0N1 1121 aa14.4□□□□□ -0.1
CCDC40-203ENST00000374877 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC40-203ENST00000374877 ADGRB1O14514 1584 aa14.4□□□□□ -0.1
CCDC40-203ENST00000374877 GOLGA2Q08379 1002 aa14.4□□□□□ -0.1
CCDC40-203ENST00000374877 RIMS1Q86UR5 1692 aaKnown RBP14.4□□□□□ -0.1
CCDC40-203ENST00000374877 UBR1Q8IWV7 1749 aa14.4□□□□□ -0.1
CCDC40-203ENST00000374877 HDGFP51858 240 aaKnown RBP14.39□□□□□ -0.11
CCDC40-203ENST00000374877 PPP2R1AP30153 589 aa14.38□□□□□ -0.11
CCDC40-203ENST00000374877 CEBPAP49715 358 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-203ENST00000374877 FRAT2O75474 233 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-203ENST00000374877 TMEM2Q9UHN6 1383 aa14.37□□□□□ -0.11
CCDC40-203ENST00000374877 CCDC146Q8IYE0 955 aa14.37□□□□□ -0.11
CCDC40-203ENST00000374877 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
CCDC40-203ENST00000374877 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
CCDC40-203ENST00000374877 SLIT1O75093 1534 aa14.35□□□□□ -0.11
CCDC40-203ENST00000374877 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
CCDC40-203ENST00000374877 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
CCDC40-203ENST00000374877 ALKQ9UM73 1620 aa14.33□□□□□ -0.11
CCDC40-203ENST00000374877 ASXL1Q8IXJ9 1541 aa14.33□□□□□ -0.12
CCDC40-203ENST00000374877 SLFN5Q08AF3 891 aa14.33□□□□□ -0.12
CCDC40-203ENST00000374877 ZNF521Q96K83 1311 aa14.33□□□□□ -0.12
CCDC40-203ENST00000374877 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
CCDC40-203ENST00000374877 BCAR3O75815 825 aa14.32□□□□□ -0.12
CCDC40-203ENST00000374877 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
CCDC40-203ENST00000374877 CEP170BQ9Y4F5 1589 aaPredicted RBP14.32□□□□□ -0.12
CCDC40-203ENST00000374877 ZNF142P52746 1687 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-203ENST00000374877 APAF1O14727 1248 aa14.31□□□□□ -0.12
CCDC40-203ENST00000374877 THEMISQ8N1K5 641 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-203ENST00000374877 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-203ENST00000374877 PLEKHG1Q9ULL1 1385 aa14.3□□□□□ -0.12
CCDC40-203ENST00000374877 NRXN3Q9Y4C0 1643 aa14.3□□□□□ -0.12
CCDC40-203ENST00000374877 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
CCDC40-203ENST00000374877 PTPRMP28827 1452 aa14.29□□□□□ -0.12
CCDC40-203ENST00000374877 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
CCDC40-203ENST00000374877 EIF5BO60841 1220 aaKnown RBP14.29□□□□□ -0.12
CCDC40-203ENST00000374877 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-203ENST00000374877 DLC1Q96QB1 1528 aa14.28□□□□□ -0.12
CCDC40-203ENST00000374877 YTHDC2Q9H6S0 1430 aaKnown RBP14.28□□□□□ -0.12
CCDC40-203ENST00000374877 CANXP27824 592 aaKnown RBP14.28□□□□□ -0.12
CCDC40-203ENST00000374877 TMEM132EQ6IEE7 984 aa14.28□□□□□ -0.12
CCDC40-203ENST00000374877 EID1Q9Y6B2 187 aa14.27□□□□□ -0.12
CCDC40-203ENST00000374877 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.12
CCDC40-203ENST00000374877 IGHDP01880 384 aa14.27□□□□□ -0.13
CCDC40-203ENST00000374877 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
CCDC40-203ENST00000374877 TRAK1Q9UPV9 953 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 MED14O60244 1454 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
CCDC40-203ENST00000374877 ABCC11Q96J66 1382 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 E9PSI1 815 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 TRMT2AQ8IZ69 625 aaKnown RBP14.25□□□□□ -0.13
CCDC40-203ENST00000374877 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-203ENST00000374877 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 QRICH2Q9H0J4 1663 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
CCDC40-203ENST00000374877 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
CCDC40-203ENST00000374877 LTKP29376 864 aa14.24□□□□□ -0.13
CCDC40-203ENST00000374877 PUS7Q96PZ0 661 aaKnown RBP14.24□□□□□ -0.13
CCDC40-203ENST00000374877 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
CCDC40-203ENST00000374877 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
CCDC40-203ENST00000374877 TECPR2O15040 1411 aa14.24□□□□□ -0.13
CCDC40-203ENST00000374877 SEC24BO95487 1268 aa14.23□□□□□ -0.13
CCDC40-203ENST00000374877 SIRT1Q96EB6 747 aa14.23□□□□□ -0.13
CCDC40-203ENST00000374877 PANK1Q8TE04 598 aa14.23□□□□□ -0.13
CCDC40-203ENST00000374877 KNDC1Q76NI1 1749 aa14.23□□□□□ -0.13
CCDC40-203ENST00000374877 BECN1Q14457 450 aa14.23□□□□□ -0.13
CCDC40-203ENST00000374877 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
CCDC40-203ENST00000374877 POGKQ9P215 609 aa14.22□□□□□ -0.13
CCDC40-203ENST00000374877 USP19O94966 1318 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms