RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
HDAC8-206ENST00000373571 YEATS2Q9ULM3 1422 aa21.85■■□□□ 1.09
HDAC8-206ENST00000373571 EVC2Q86UK5 1308 aa21.85■■□□□ 1.09
HDAC8-206ENST00000373571 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
HDAC8-206ENST00000373571 TNNT2P45379 298 aaPredicted RBP21.85■■□□□ 1.09
HDAC8-206ENST00000373571 BACH2Q9BYV9 841 aa21.84■■□□□ 1.09
HDAC8-206ENST00000373571 IDI1Q13907 227 aa21.83■■□□□ 1.09
HDAC8-206ENST00000373571 PUS7Q96PZ0 661 aaKnown RBP21.83■■□□□ 1.08
HDAC8-206ENST00000373571 CGNL1Q0VF96 1302 aa21.82■■□□□ 1.08
HDAC8-206ENST00000373571 KDM2BQ8NHM5 1336 aa21.82■■□□□ 1.08
HDAC8-206ENST00000373571 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
HDAC8-206ENST00000373571 MYO5BQ9ULV0 1848 aa21.81■■□□□ 1.08
HDAC8-206ENST00000373571 SLC52A1Q9NWF4 448 aa21.8■■□□□ 1.08
HDAC8-206ENST00000373571 ZBTB47Q9UFB7 747 aaPredicted RBP21.8■■□□□ 1.08
HDAC8-206ENST00000373571 PREX1Q8TCU6 1659 aa21.8■■□□□ 1.08
HDAC8-206ENST00000373571 ZFYVE9O95405 1425 aa21.8■■□□□ 1.08
HDAC8-206ENST00000373571 ANKRD36BQ8N2N9 1353 aa21.8■■□□□ 1.08
HDAC8-206ENST00000373571 CENPQQ7L2Z9 268 aaPredicted RBP21.8■■□□□ 1.08
HDAC8-206ENST00000373571 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
HDAC8-206ENST00000373571 SKAP1Q86WV1 359 aa21.8■■□□□ 1.08
HDAC8-206ENST00000373571 WWC1Q8IX03 1113 aa21.79■■□□□ 1.08
HDAC8-206ENST00000373571 BCAR3O75815 825 aa21.77■■□□□ 1.08
HDAC8-206ENST00000373571 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
HDAC8-206ENST00000373571 RUNDC1Q96C34 613 aa21.77■■□□□ 1.08
HDAC8-206ENST00000373571 NSD2O96028 1365 aa21.76■■□□□ 1.07
HDAC8-206ENST00000373571 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
HDAC8-206ENST00000373571 MTHFSP49914 203 aa21.76■■□□□ 1.07
HDAC8-206ENST00000373571 CABP2Q9NPB3 220 aa21.76■■□□□ 1.07
HDAC8-206ENST00000373571 SAFB2Q14151 953 aaKnown RBP eCLIP21.75■■□□□ 1.07
HDAC8-206ENST00000373571 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
HDAC8-206ENST00000373571 STK26Q9P289 416 aa21.73■■□□□ 1.07
HDAC8-206ENST00000373571 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
HDAC8-206ENST00000373571 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
HDAC8-206ENST00000373571 TCP11L2Q8N4U5 519 aa21.72■■□□□ 1.07
HDAC8-206ENST00000373571 RRP7AQ9Y3A4 280 aaKnown RBP21.72■■□□□ 1.07
HDAC8-206ENST00000373571 NINLQ9Y2I6 1382 aa21.7■■□□□ 1.06
HDAC8-206ENST00000373571 PTPRMP28827 1452 aa21.7■■□□□ 1.06
HDAC8-206ENST00000373571 A0A1W2PP64 1363 aa21.69■■□□□ 1.06
HDAC8-206ENST00000373571 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
HDAC8-206ENST00000373571 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
HDAC8-206ENST00000373571 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
HDAC8-206ENST00000373571 NBR1Q14596 966 aa21.68■■□□□ 1.06
HDAC8-206ENST00000373571 ABCC11Q96J66 1382 aa21.68■■□□□ 1.06
HDAC8-206ENST00000373571 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
HDAC8-206ENST00000373571 PDE3AQ14432 1141 aa21.67■■□□□ 1.06
HDAC8-206ENST00000373571 WDR63Q8IWG1 891 aa21.67■■□□□ 1.06
HDAC8-206ENST00000373571 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
HDAC8-206ENST00000373571 FBXO31Q5XUX0 539 aaPredicted RBP21.66■■□□□ 1.06
HDAC8-206ENST00000373571 CCDC27Q2M243 656 aa21.65■■□□□ 1.06
HDAC8-206ENST00000373571 CLTCQ00610 1675 aaKnown RBP21.65■■□□□ 1.06
HDAC8-206ENST00000373571 ATAD2Q6PL18 1390 aa21.65■■□□□ 1.06
HDAC8-206ENST00000373571 PRAM1Q96QH2 718 aa21.65■■□□□ 1.06
HDAC8-206ENST00000373571 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
HDAC8-206ENST00000373571 U2AF1L5P0DN76 240 aaPredicted RBP21.64■■□□□ 1.05
HDAC8-206ENST00000373571 U2AF1Q01081 240 aaKnown RBP eCLIP21.64■■□□□ 1.05
HDAC8-206ENST00000373571 POGKQ9P215 609 aa21.64■■□□□ 1.05
HDAC8-206ENST00000373571 ALKQ9UM73 1620 aa21.63■■□□□ 1.05
HDAC8-206ENST00000373571 FAM69CQ0P6D2 419 aa21.63■■□□□ 1.05
HDAC8-206ENST00000373571 DIP2BQ9P265 1576 aa21.63■■□□□ 1.05
HDAC8-206ENST00000373571 ADGRB2O60241 1585 aa21.62■■□□□ 1.05
HDAC8-206ENST00000373571 ANKRD26Q9UPS8 1709 aa21.62■■□□□ 1.05
HDAC8-206ENST00000373571 RARSP54136 660 aaKnown RBP21.61■■□□□ 1.05
HDAC8-206ENST00000373571 GGNBP2Q9H3C7 697 aa21.61■■□□□ 1.05
HDAC8-206ENST00000373571 FAM161AQ3B820 660 aa21.61■■□□□ 1.05
HDAC8-206ENST00000373571 NCBP3Q53F19 620 aaKnown RBP21.61■■□□□ 1.05
HDAC8-206ENST00000373571 PANK1Q8TE04 598 aa21.61■■□□□ 1.05
HDAC8-206ENST00000373571 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
HDAC8-206ENST00000373571 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
HDAC8-206ENST00000373571 CD163L1Q9NR16 1453 aa21.6■■□□□ 1.05
HDAC8-206ENST00000373571 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
HDAC8-206ENST00000373571 COG6Q9Y2V7 657 aa21.6■■□□□ 1.05
HDAC8-206ENST00000373571 REREQ9P2R6 1566 aa21.59■■□□□ 1.05
HDAC8-206ENST00000373571 RGS3P49796 1198 aa21.59■■□□□ 1.05
HDAC8-206ENST00000373571 FRAT1Q92837 279 aaPredicted RBP21.59■■□□□ 1.05
HDAC8-206ENST00000373571 C8orf34Q49A92 452 aa21.58■■□□□ 1.05
HDAC8-206ENST00000373571 CLUAP1Q96AJ1 413 aa21.58■■□□□ 1.05
HDAC8-206ENST00000373571 MED14O60244 1454 aa21.58■■□□□ 1.05
HDAC8-206ENST00000373571 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.04
HDAC8-206ENST00000373571 AGLP35573 1532 aa21.57■■□□□ 1.04
HDAC8-206ENST00000373571 COL3A1P02461 1466 aaPredicted RBP21.57■■□□□ 1.04
HDAC8-206ENST00000373571 IGHDP01880 384 aa21.57■■□□□ 1.04
HDAC8-206ENST00000373571 MYH16Q9H6N6 1097 aa21.57■■□□□ 1.04
HDAC8-206ENST00000373571 RIMBP3CA6NJZ7 1639 aa21.57■■□□□ 1.04
HDAC8-206ENST00000373571 RIMBP3BA6NNM3 1639 aa21.57■■□□□ 1.04
HDAC8-206ENST00000373571 RIMBP3Q9UFD9 1639 aa21.57■■□□□ 1.04
HDAC8-206ENST00000373571 FYB1O15117 783 aa21.56■■□□□ 1.04
HDAC8-206ENST00000373571 NLRP1Q9C000 1473 aa21.56■■□□□ 1.04
HDAC8-206ENST00000373571 ARHGEF40Q8TER5 1519 aa21.55■■□□□ 1.04
HDAC8-206ENST00000373571 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
HDAC8-206ENST00000373571 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
HDAC8-206ENST00000373571 CDK19Q9BWU1 502 aa21.55■■□□□ 1.04
HDAC8-206ENST00000373571 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
HDAC8-206ENST00000373571 KIF20BQ96Q89 1820 aa21.53■■□□□ 1.04
HDAC8-206ENST00000373571 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
HDAC8-206ENST00000373571 PLEKHF1Q96S99 279 aa21.53■■□□□ 1.04
HDAC8-206ENST00000373571 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
HDAC8-206ENST00000373571 SPATA31D1Q6ZQQ2 1576 aa21.53■■□□□ 1.04
HDAC8-206ENST00000373571 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.04
HDAC8-206ENST00000373571 DEKP35659 375 aaKnown RBP21.52■■□□□ 1.03
HDAC8-206ENST00000373571 DLC1Q96QB1 1528 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms