RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SAFB2Q14151 953 aaKnown RBP eCLIP26.44■■□□□ 1.82
CDX4-201ENST00000373514 FMN2Q9NZ56 1722 aa26.43■■□□□ 1.82
CDX4-201ENST00000373514 DCCP43146 1447 aa26.4■■□□□ 1.82
CDX4-201ENST00000373514 RGPD8O14715 1765 aaPredicted RBP26.39■■□□□ 1.82
CDX4-201ENST00000373514 UBAP1LF5GYI3 381 aa26.39■■□□□ 1.81
CDX4-201ENST00000373514 SIRT1Q96EB6 747 aa26.39■■□□□ 1.81
CDX4-201ENST00000373514 ROBO1Q9Y6N7 1651 aa26.39■■□□□ 1.81
CDX4-201ENST00000373514 CARD11Q9BXL7 1154 aa26.38■■□□□ 1.81
CDX4-201ENST00000373514 POGKQ9P215 609 aa26.38■■□□□ 1.81
CDX4-201ENST00000373514 C19orf44Q9H6X5 657 aa26.37■■□□□ 1.81
CDX4-201ENST00000373514 MST1RQ04912 1400 aa26.35■■□□□ 1.81
CDX4-201ENST00000373514 USP32Q8NFA0 1604 aa26.34■■□□□ 1.81
CDX4-201ENST00000373514 MINK1Q8N4C8 1332 aaPredicted RBP26.34■■□□□ 1.81
CDX4-201ENST00000373514 HIRIP3Q9BW71 556 aaPredicted RBP26.33■■□□□ 1.81
CDX4-201ENST00000373514 TOM1O60784 492 aa26.31■■□□□ 1.8
CDX4-201ENST00000373514 ATF3P18847 181 aa26.31■■□□□ 1.8
CDX4-201ENST00000373514 PIP4K2BP78356 416 aa26.31■■□□□ 1.8
CDX4-201ENST00000373514 CENPJQ9HC77 1338 aaPredicted RBP26.31■■□□□ 1.8
CDX4-201ENST00000373514 EIF3AQ14152 1382 aaKnown RBP26.3■■□□□ 1.8
CDX4-201ENST00000373514 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
CDX4-201ENST00000373514 TULP4Q9NRJ4 1543 aa26.3■■□□□ 1.8
CDX4-201ENST00000373514 CADPS2Q86UW7 1296 aa26.29■■□□□ 1.8
CDX4-201ENST00000373514 FBXO41Q8TF61 875 aa26.29■■□□□ 1.8
CDX4-201ENST00000373514 C1orf167Q5SNV9 1468 aa26.26■■□□□ 1.79
CDX4-201ENST00000373514 USP47Q96K76 1375 aa26.26■■□□□ 1.79
CDX4-201ENST00000373514 TOPAZ1Q8N9V7 1692 aa26.25■■□□□ 1.79
CDX4-201ENST00000373514 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
CDX4-201ENST00000373514 NUTM2FA1L443 756 aa26.24■■□□□ 1.79
CDX4-201ENST00000373514 SLAIN2Q9P270 581 aa26.24■■□□□ 1.79
CDX4-201ENST00000373514 NHSL1Q5SYE7 1610 aa26.24■■□□□ 1.79
CDX4-201ENST00000373514 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
CDX4-201ENST00000373514 ATP7BP35670 1465 aa26.21■■□□□ 1.79
CDX4-201ENST00000373514 KIF1AQ12756 1690 aa26.2■■□□□ 1.78
CDX4-201ENST00000373514 WASLO00401 505 aaPredicted RBP26.19■■□□□ 1.78
CDX4-201ENST00000373514 PRR36Q9H6K5 1346 aa26.17■■□□□ 1.78
CDX4-201ENST00000373514 ST20-MTHFSA0A0A6YYL1 179 aa26.17■■□□□ 1.78
CDX4-201ENST00000373514 BRINP3Q76B58 766 aa26.17■■□□□ 1.78
CDX4-201ENST00000373514 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
CDX4-201ENST00000373514 SBNO2Q9Y2G9 1366 aa26.17■■□□□ 1.78
CDX4-201ENST00000373514 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
CDX4-201ENST00000373514 ANKARQ7Z5J8 1434 aa26.16■■□□□ 1.78
CDX4-201ENST00000373514 ORAI2Q96SN7 254 aa26.15■■□□□ 1.78
CDX4-201ENST00000373514 CDK19Q9BWU1 502 aa26.14■■□□□ 1.78
CDX4-201ENST00000373514 COL16A1Q07092 1604 aaPredicted RBP26.14■■□□□ 1.78
CDX4-201ENST00000373514 TESK2Q96S53 571 aa26.12■■□□□ 1.77
CDX4-201ENST00000373514 ESCO1Q5FWF5 840 aa26.11■■□□□ 1.77
CDX4-201ENST00000373514 CABP2Q9NPB3 220 aa26.11■■□□□ 1.77
CDX4-201ENST00000373514 DDX17Q92841 729 aaKnown RBP26.1■■□□□ 1.77
CDX4-201ENST00000373514 EVC2Q86UK5 1308 aa26.09■■□□□ 1.77
CDX4-201ENST00000373514 HSPA1LP34931 641 aa26.09■■□□□ 1.77
CDX4-201ENST00000373514 SRPK2P78362 688 aaKnown RBP26.09■■□□□ 1.77
CDX4-201ENST00000373514 DISP3Q9P2K9 1392 aa26.08■■□□□ 1.77
CDX4-201ENST00000373514 HSPA5P11021 654 aaKnown RBP26.08■■□□□ 1.77
CDX4-201ENST00000373514 NUDT16Q96DE0 195 aaKnown RBP26.06■■□□□ 1.76
CDX4-201ENST00000373514 MYOM1P52179 1685 aa26.05■■□□□ 1.76
CDX4-201ENST00000373514 AKAP12Q02952 1782 aa26.05■■□□□ 1.76
CDX4-201ENST00000373514 EIF4G2P78344 907 aaKnown RBP eCLIP26.04■■□□□ 1.76
CDX4-201ENST00000373514 TRPM3Q9HCF6 1732 aaPredicted RBP26.04■■□□□ 1.76
CDX4-201ENST00000373514 PPIP5K1Q6PFW1 1433 aa26.04■■□□□ 1.76
CDX4-201ENST00000373514 PXDNQ92626 1479 aa26.04■■□□□ 1.76
CDX4-201ENST00000373514 PMFBP1Q8TBY8 1022 aa26.03■■□□□ 1.76
CDX4-201ENST00000373514 PHF8Q9UPP1 1060 aa26.03■■□□□ 1.76
CDX4-201ENST00000373514 XPCQ01831 940 aaPredicted RBP26■■□□□ 1.75
CDX4-201ENST00000373514 FOXO3O43524 673 aa25.99■■□□□ 1.75
CDX4-201ENST00000373514 SHPRHQ149N8 1683 aa25.99■■□□□ 1.75
CDX4-201ENST00000373514 MON2Q7Z3U7 1717 aa25.97■■□□□ 1.75
CDX4-201ENST00000373514 ATAD2Q6PL18 1390 aa25.97■■□□□ 1.75
CDX4-201ENST00000373514 NPHP3Q7Z494 1330 aa25.96■■□□□ 1.75
CDX4-201ENST00000373514 TMF1P82094 1093 aa25.96■■□□□ 1.75
CDX4-201ENST00000373514 CCDC61Q9Y6R9 512 aa25.96■■□□□ 1.75
CDX4-201ENST00000373514 NRKQ7Z2Y5 1582 aa25.96■■□□□ 1.75
CDX4-201ENST00000373514 ALS2Q96Q42 1657 aa25.95■■□□□ 1.75
CDX4-201ENST00000373514 SOS2Q07890 1332 aaPredicted RBP25.94■■□□□ 1.74
CDX4-201ENST00000373514 POLR3AO14802 1390 aaPredicted RBP25.93■■□□□ 1.74
CDX4-201ENST00000373514 CABP1Q9NZU7 370 aa25.93■■□□□ 1.74
CDX4-201ENST00000373514 ACEP12821 1306 aa25.92■■□□□ 1.74
CDX4-201ENST00000373514 CD163L1Q9NR16 1453 aa25.92■■□□□ 1.74
CDX4-201ENST00000373514 ABCA3Q99758 1704 aa25.91■■□□□ 1.74
CDX4-201ENST00000373514 NGDNQ8NEJ9 315 aaKnown RBP25.91■■□□□ 1.74
CDX4-201ENST00000373514 COL22A1Q8NFW1 1626 aaPredicted RBP25.91■■□□□ 1.74
CDX4-201ENST00000373514 PLEKHG3A1L390 1219 aa25.9■■□□□ 1.74
CDX4-201ENST00000373514 KRT28Q7Z3Y7 464 aa25.88■■□□□ 1.73
CDX4-201ENST00000373514 CRYBG1Q9Y4K1 1723 aa25.88■■□□□ 1.73
CDX4-201ENST00000373514 TNS3Q68CZ2 1445 aa25.88■■□□□ 1.73
CDX4-201ENST00000373514 C11orf95C9JLR9 678 aaPredicted RBP25.87■■□□□ 1.73
CDX4-201ENST00000373514 SLC24A1O60721 1099 aa25.86■■□□□ 1.73
CDX4-201ENST00000373514 PSME1Q06323 249 aa25.86■■□□□ 1.73
CDX4-201ENST00000373514 TMC1Q8TDI8 760 aa25.86■■□□□ 1.73
CDX4-201ENST00000373514 PNPLA6Q8IY17 1366 aa25.85■■□□□ 1.73
CDX4-201ENST00000373514 JCADQ9P266 1359 aa25.85■■□□□ 1.73
CDX4-201ENST00000373514 USP6P35125 1406 aa25.85■■□□□ 1.73
CDX4-201ENST00000373514 PUS7Q96PZ0 661 aaKnown RBP25.85■■□□□ 1.73
CDX4-201ENST00000373514 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
CDX4-201ENST00000373514 CPSF1Q10570 1443 aaKnown RBP25.85■■□□□ 1.73
CDX4-201ENST00000373514 POLR3GLQ9BT43 218 aa25.84■■□□□ 1.73
CDX4-201ENST00000373514 SLC12A5Q9H2X9 1139 aa25.84■■□□□ 1.73
CDX4-201ENST00000373514 MARF1Q9Y4F3 1742 aaKnown RBP25.84■■□□□ 1.73
CDX4-201ENST00000373514 A0A1W2PP64 1363 aa25.83■■□□□ 1.73
CDX4-201ENST00000373514 LRRC59Q96AG4 307 aaKnown RBP25.83■■□□□ 1.72
CDX4-201ENST00000373514 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms