RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 NOL8Q76FK4 1167 aaKnown RBP22.25■■□□□ 1.15
TRAF3IP1-201ENST00000373327 MBD5Q9P267 1494 aa22.24■■□□□ 1.15
TRAF3IP1-201ENST00000373327 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
TRAF3IP1-201ENST00000373327 AMPHP49418 695 aa22.24■■□□□ 1.15
TRAF3IP1-201ENST00000373327 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
TRAF3IP1-201ENST00000373327 ANP32BQ92688 251 aaKnown RBP22.23■■□□□ 1.15
TRAF3IP1-201ENST00000373327 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
TRAF3IP1-201ENST00000373327 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
TRAF3IP1-201ENST00000373327 RARSP54136 660 aaKnown RBP22.21■■□□□ 1.15
TRAF3IP1-201ENST00000373327 GSE1Q14687 1217 aa22.21■■□□□ 1.15
TRAF3IP1-201ENST00000373327 IL27Q8NEV9 243 aa22.21■■□□□ 1.15
TRAF3IP1-201ENST00000373327 DDX19BQ9UMR2 479 aa22.21■■□□□ 1.15
TRAF3IP1-201ENST00000373327 DCTN1Q14203 1278 aa22.2■■□□□ 1.15
TRAF3IP1-201ENST00000373327 FOXD4L5Q5VV16 416 aaPredicted RBP22.2■■□□□ 1.15
TRAF3IP1-201ENST00000373327 FOXD4L4Q8WXT5 416 aaPredicted RBP22.2■■□□□ 1.15
TRAF3IP1-201ENST00000373327 PDE3AQ14432 1141 aa22.2■■□□□ 1.14
TRAF3IP1-201ENST00000373327 SHANK2Q9UPX8 1470 aa22.2■■□□□ 1.14
TRAF3IP1-201ENST00000373327 SLC26A8Q96RN1 970 aa22.19■■□□□ 1.14
TRAF3IP1-201ENST00000373327 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
TRAF3IP1-201ENST00000373327 OS9Q13438 667 aaPredicted RBP22.18■■□□□ 1.14
TRAF3IP1-201ENST00000373327 ZNF428Q96B54 188 aa22.18■■□□□ 1.14
TRAF3IP1-201ENST00000373327 DUOX2Q9NRD8 1548 aa22.18■■□□□ 1.14
TRAF3IP1-201ENST00000373327 CALD1Q05682 793 aaKnown RBP22.17■■□□□ 1.14
TRAF3IP1-201ENST00000373327 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
TRAF3IP1-201ENST00000373327 SSH1Q8WYL5 1049 aa22.16■■□□□ 1.14
TRAF3IP1-201ENST00000373327 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
TRAF3IP1-201ENST00000373327 BCORL1Q5H9F3 1711 aa22.16■■□□□ 1.14
TRAF3IP1-201ENST00000373327 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
TRAF3IP1-201ENST00000373327 TAOK2Q9UL54 1235 aa22.15■■□□□ 1.14
TRAF3IP1-201ENST00000373327 BRPF3Q9ULD4 1205 aa22.15■■□□□ 1.14
TRAF3IP1-201ENST00000373327 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
TRAF3IP1-201ENST00000373327 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
TRAF3IP1-201ENST00000373327 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
TRAF3IP1-201ENST00000373327 GOLGA6L22H0YM25 854 aa22.14■■□□□ 1.14
TRAF3IP1-201ENST00000373327 NGEFQ8N5V2 710 aa22.14■■□□□ 1.14
TRAF3IP1-201ENST00000373327 CHMP4BQ9H444 224 aaKnown RBP22.14■■□□□ 1.14
TRAF3IP1-201ENST00000373327 RLBP1P12271 317 aa22.13■■□□□ 1.13
TRAF3IP1-201ENST00000373327 NME9Q86XW9 330 aa22.13■■□□□ 1.13
TRAF3IP1-201ENST00000373327 TMEM57Q8N5G2 664 aa22.13■■□□□ 1.13
TRAF3IP1-201ENST00000373327 TRIM44Q96DX7 344 aaPredicted RBP22.13■■□□□ 1.13
TRAF3IP1-201ENST00000373327 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
TRAF3IP1-201ENST00000373327 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
TRAF3IP1-201ENST00000373327 SLC52A1Q9NWF4 448 aa22.12■■□□□ 1.13
TRAF3IP1-201ENST00000373327 NKTRP30414 1462 aaKnown RBP22.12■■□□□ 1.13
TRAF3IP1-201ENST00000373327 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
TRAF3IP1-201ENST00000373327 KDM5CP41229 1560 aa22.12■■□□□ 1.13
TRAF3IP1-201ENST00000373327 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 PCDHB15Q9Y5E8 787 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 EID1Q9Y6B2 187 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 ERCC6L2Q5T890 1561 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 MIS18AQ9NYP9 233 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 USP35Q9P2H5 1018 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 TRIM6-TRIM34B2RNG4 842 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 WDR63Q8IWG1 891 aa22.11■■□□□ 1.13
TRAF3IP1-201ENST00000373327 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
TRAF3IP1-201ENST00000373327 SAMD9LQ8IVG5 1584 aa22.1■■□□□ 1.13
TRAF3IP1-201ENST00000373327 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
TRAF3IP1-201ENST00000373327 STK31Q9BXU1 1019 aa22.1■■□□□ 1.13
TRAF3IP1-201ENST00000373327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
TRAF3IP1-201ENST00000373327 ZRANB1Q9UGI0 708 aa22.1■■□□□ 1.13
TRAF3IP1-201ENST00000373327 ABCA8O94911 1581 aa22.09■■□□□ 1.13
TRAF3IP1-201ENST00000373327 RNF123Q5XPI4 1314 aa22.09■■□□□ 1.13
TRAF3IP1-201ENST00000373327 EIF2S2P20042 333 aaKnown RBP22.09■■□□□ 1.13
TRAF3IP1-201ENST00000373327 RBM33Q96EV2 1170 aaKnown RBP22.09■■□□□ 1.13
TRAF3IP1-201ENST00000373327 ADGBQ8N7X0 1667 aa22.08■■□□□ 1.13
TRAF3IP1-201ENST00000373327 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
TRAF3IP1-201ENST00000373327 GPRASP1Q5JY77 1395 aa22.07■■□□□ 1.12
TRAF3IP1-201ENST00000373327 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
TRAF3IP1-201ENST00000373327 TWISTNBQ3B726 338 aaPredicted RBP22.07■■□□□ 1.12
TRAF3IP1-201ENST00000373327 KIF16BQ96L93 1317 aa22.07■■□□□ 1.12
TRAF3IP1-201ENST00000373327 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
TRAF3IP1-201ENST00000373327 LMOD3Q0VAK6 560 aa22.06■■□□□ 1.12
TRAF3IP1-201ENST00000373327 MAGI2Q86UL8 1455 aa22.06■■□□□ 1.12
TRAF3IP1-201ENST00000373327 FAM83GA6ND36 823 aa22.06■■□□□ 1.12
TRAF3IP1-201ENST00000373327 TTC37Q6PGP7 1564 aa22.06■■□□□ 1.12
TRAF3IP1-201ENST00000373327 GNAI1P63096 354 aa22.05■■□□□ 1.12
TRAF3IP1-201ENST00000373327 SEC24BO95487 1268 aa22.05■■□□□ 1.12
TRAF3IP1-201ENST00000373327 TRIM27P14373 513 aa22.05■■□□□ 1.12
TRAF3IP1-201ENST00000373327 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
TRAF3IP1-201ENST00000373327 CEBPAP49715 358 aaPredicted RBP22.04■■□□□ 1.12
TRAF3IP1-201ENST00000373327 FYB1O15117 783 aa22.04■■□□□ 1.12
TRAF3IP1-201ENST00000373327 RILPL2Q969X0 211 aa22.04■■□□□ 1.12
TRAF3IP1-201ENST00000373327 RPGRIP1LQ68CZ1 1315 aa22.03■■□□□ 1.12
TRAF3IP1-201ENST00000373327 PLCB2Q00722 1185 aa22.03■■□□□ 1.12
TRAF3IP1-201ENST00000373327 NAP1L5Q96NT1 182 aaPredicted RBP22.03■■□□□ 1.12
TRAF3IP1-201ENST00000373327 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
TRAF3IP1-201ENST00000373327 CDC42BPAQ5VT25 1732 aa22.02■■□□□ 1.12
TRAF3IP1-201ENST00000373327 MCM10Q7L590 875 aa22.02■■□□□ 1.12
TRAF3IP1-201ENST00000373327 HAP1P54257 671 aaPredicted RBP22.02■■□□□ 1.12
TRAF3IP1-201ENST00000373327 NLRP6P59044 892 aa22.01■■□□□ 1.11
TRAF3IP1-201ENST00000373327 TSPYL4Q9UJ04 414 aa22.01■■□□□ 1.11
TRAF3IP1-201ENST00000373327 RTEL1-TNFRSF6BF6WH68 1400 aa22.01■■□□□ 1.11
TRAF3IP1-201ENST00000373327 NUDT16Q96DE0 195 aaKnown RBP22.01■■□□□ 1.11
TRAF3IP1-201ENST00000373327 FKBP5Q13451 457 aaPredicted RBP22■■□□□ 1.11
TRAF3IP1-201ENST00000373327 C8orf34Q49A92 452 aa22■■□□□ 1.11
TRAF3IP1-201ENST00000373327 KCNJ4P48050 445 aa22■■□□□ 1.11
TRAF3IP1-201ENST00000373327 GOLGA6L3A6NEY3 463 aa21.98■■□□□ 1.11
TRAF3IP1-201ENST00000373327 CCDC9Q9Y3X0 531 aaKnown RBP21.97■■□□□ 1.11
TRAF3IP1-201ENST00000373327 ZNF330Q9Y3S2 320 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms