RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 SHPRHQ149N8 1683 aa23.14■■□□□ 1.3
HNF4A-203ENST00000372920 UHRF1BP1LA0JNW5 1464 aa23.14■■□□□ 1.29
HNF4A-203ENST00000372920 POGKQ9P215 609 aa23.14■■□□□ 1.29
HNF4A-203ENST00000372920 AAMPQ13685 434 aa23.13■■□□□ 1.29
HNF4A-203ENST00000372920 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
HNF4A-203ENST00000372920 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
HNF4A-203ENST00000372920 ARAP3Q8WWN8 1544 aa23.13■■□□□ 1.29
HNF4A-203ENST00000372920 IQSEC2Q5JU85 1478 aa23.13■■□□□ 1.29
HNF4A-203ENST00000372920 BCL2L13Q9BXK5 485 aa23.12■■□□□ 1.29
HNF4A-203ENST00000372920 MYO3AQ8NEV4 1616 aa23.12■■□□□ 1.29
HNF4A-203ENST00000372920 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
HNF4A-203ENST00000372920 PDZRN3Q9UPQ7 1066 aa23.11■■□□□ 1.29
HNF4A-203ENST00000372920 SLC12A5Q9H2X9 1139 aa23.1■■□□□ 1.29
HNF4A-203ENST00000372920 ANTXR1Q9H6X2 564 aa23.1■■□□□ 1.29
HNF4A-203ENST00000372920 UPF2Q9HAU5 1272 aaKnown RBP23.1■■□□□ 1.29
HNF4A-203ENST00000372920 INO80Q9ULG1 1556 aaPredicted RBP23.1■■□□□ 1.29
HNF4A-203ENST00000372920 NRXN1Q9ULB1 1477 aa23.1■■□□□ 1.29
HNF4A-203ENST00000372920 TBC1D32Q96NH3 1257 aa23.1■■□□□ 1.29
HNF4A-203ENST00000372920 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
HNF4A-203ENST00000372920 MROH1Q8NDA8 1641 aa23.08■■□□□ 1.29
HNF4A-203ENST00000372920 IFT172Q9UG01 1749 aa23.07■■□□□ 1.28
HNF4A-203ENST00000372920 TRAK1Q9UPV9 953 aa23.07■■□□□ 1.28
HNF4A-203ENST00000372920 KIF1BO60333 1816 aa23.07■■□□□ 1.28
HNF4A-203ENST00000372920 RWDD1Q9H446 243 aaPredicted RBP23.07■■□□□ 1.28
HNF4A-203ENST00000372920 MTHFSP49914 203 aa23.06■■□□□ 1.28
HNF4A-203ENST00000372920 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
HNF4A-203ENST00000372920 FAM43AQ8N2R8 423 aa23.06■■□□□ 1.28
HNF4A-203ENST00000372920 TBC1D2Q9BYX2 928 aa23.06■■□□□ 1.28
HNF4A-203ENST00000372920 NOS1P29475 1434 aa23.06■■□□□ 1.28
HNF4A-203ENST00000372920 CCDC27Q2M243 656 aa23.05■■□□□ 1.28
HNF4A-203ENST00000372920 FANCAO15360 1455 aa23.05■■□□□ 1.28
HNF4A-203ENST00000372920 EFCAB6Q5THR3 1501 aa23.04■■□□□ 1.28
HNF4A-203ENST00000372920 ZNF518AQ6AHZ1 1483 aa23.04■■□□□ 1.28
HNF4A-203ENST00000372920 SETBP1Q9Y6X0 1596 aa23.02■■□□□ 1.28
HNF4A-203ENST00000372920 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
HNF4A-203ENST00000372920 CHGAP10645 457 aaKnown RBP23.02■■□□□ 1.27
HNF4A-203ENST00000372920 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.27
HNF4A-203ENST00000372920 MVPQ14764 893 aaKnown RBP23.01■■□□□ 1.27
HNF4A-203ENST00000372920 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
HNF4A-203ENST00000372920 PPRC1Q5VV67 1664 aaKnown RBP22.99■■□□□ 1.27
HNF4A-203ENST00000372920 C14orf93Q9H972 538 aaKnown RBP22.99■■□□□ 1.27
HNF4A-203ENST00000372920 ADGRL1O94910 1474 aa22.99■■□□□ 1.27
HNF4A-203ENST00000372920 ADGRB3O60242 1522 aa22.98■■□□□ 1.27
HNF4A-203ENST00000372920 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
HNF4A-203ENST00000372920 ZKSCAN2Q63HK3 967 aa22.97■■□□□ 1.27
HNF4A-203ENST00000372920 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
HNF4A-203ENST00000372920 ZC3H13Q5T200 1668 aaKnown RBP22.97■■□□□ 1.27
HNF4A-203ENST00000372920 U2AF1L5P0DN76 240 aaPredicted RBP22.97■■□□□ 1.27
HNF4A-203ENST00000372920 U2AF1Q01081 240 aaKnown RBP eCLIP22.97■■□□□ 1.27
HNF4A-203ENST00000372920 L1TD1Q5T7N2 865 aaKnown RBP22.96■■□□□ 1.27
HNF4A-203ENST00000372920 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
HNF4A-203ENST00000372920 USP32Q8NFA0 1604 aa22.96■■□□□ 1.27
HNF4A-203ENST00000372920 DZIP1LQ8IYY4 767 aaKnown RBP22.96■■□□□ 1.27
HNF4A-203ENST00000372920 NCBP3Q53F19 620 aaKnown RBP22.95■■□□□ 1.27
HNF4A-203ENST00000372920 SPRYD3Q8NCJ5 442 aa22.95■■□□□ 1.26
HNF4A-203ENST00000372920 ADGRB1O14514 1584 aa22.95■■□□□ 1.26
HNF4A-203ENST00000372920 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
HNF4A-203ENST00000372920 LMTK2Q8IWU2 1503 aa22.93■■□□□ 1.26
HNF4A-203ENST00000372920 EIF5BO60841 1220 aaKnown RBP22.92■■□□□ 1.26
HNF4A-203ENST00000372920 C22orf23Q9BZE7 217 aa22.92■■□□□ 1.26
HNF4A-203ENST00000372920 CT47B1P0C2W7 299 aaPredicted RBP22.9■■□□□ 1.26
HNF4A-203ENST00000372920 MFAP1P55081 439 aaKnown RBP22.9■■□□□ 1.26
HNF4A-203ENST00000372920 SMC4Q9NTJ3 1288 aa22.9■■□□□ 1.26
HNF4A-203ENST00000372920 MCM4P33991 863 aa22.9■■□□□ 1.26
HNF4A-203ENST00000372920 ADGRB2O60241 1585 aa22.89■■□□□ 1.26
HNF4A-203ENST00000372920 RSPH6AQ9H0K4 717 aa22.89■■□□□ 1.26
HNF4A-203ENST00000372920 TRIM27P14373 513 aa22.89■■□□□ 1.25
HNF4A-203ENST00000372920 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.25
HNF4A-203ENST00000372920 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
HNF4A-203ENST00000372920 NSD2O96028 1365 aa22.88■■□□□ 1.25
HNF4A-203ENST00000372920 HDAC1Q13547 482 aaPredicted RBP22.88■■□□□ 1.25
HNF4A-203ENST00000372920 PPLO60437 1756 aa22.88■■□□□ 1.25
HNF4A-203ENST00000372920 NPATQ14207 1427 aa22.87■■□□□ 1.25
HNF4A-203ENST00000372920 RRAGDQ9NQL2 400 aaPredicted RBP22.87■■□□□ 1.25
HNF4A-203ENST00000372920 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
HNF4A-203ENST00000372920 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
HNF4A-203ENST00000372920 ITPRIPQ8IWB1 547 aa22.86■■□□□ 1.25
HNF4A-203ENST00000372920 SSH1Q8WYL5 1049 aa22.86■■□□□ 1.25
HNF4A-203ENST00000372920 ARXQ96QS3 562 aa22.86■■□□□ 1.25
HNF4A-203ENST00000372920 CHMP5Q9NZZ3 219 aa22.86■■□□□ 1.25
HNF4A-203ENST00000372920 PUS7Q96PZ0 661 aaKnown RBP22.85■■□□□ 1.25
HNF4A-203ENST00000372920 DDX19BQ9UMR2 479 aa22.85■■□□□ 1.25
HNF4A-203ENST00000372920 GOLGA6L3A6NEY3 463 aa22.85■■□□□ 1.25
HNF4A-203ENST00000372920 XRCC6P12956 609 aaKnown RBP eCLIP22.85■■□□□ 1.252e-10■■■■□ 23.7
HNF4A-203ENST00000372920 CD109Q6YHK3 1445 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 PLEKHF1Q96S99 279 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 TULP4Q9NRJ4 1543 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 FSD2A1L4K1 749 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 ATF7IPQ6VMQ6 1270 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 GZF1Q9H116 711 aaPredicted RBP22.84■■□□□ 1.25
HNF4A-203ENST00000372920 RPGRIP1LQ68CZ1 1315 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 CABP2Q9NPB3 220 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 TRIM35Q9UPQ4 493 aa22.84■■□□□ 1.25
HNF4A-203ENST00000372920 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.25
HNF4A-203ENST00000372920 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
HNF4A-203ENST00000372920 SMC5Q8IY18 1101 aa22.82■■□□□ 1.24
HNF4A-203ENST00000372920 NOB1Q9ULX3 412 aaKnown RBP22.82■■□□□ 1.24
HNF4A-203ENST00000372920 GLI2P10070 1586 aa22.81■■□□□ 1.24
HNF4A-203ENST00000372920 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
HNF4A-203ENST00000372920 GGT6Q6P531 493 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms