RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 TRAK1Q9UPV9 953 aa28.95■■■□□ 2.22
TMEM53-205ENST00000372244 AHDC1Q5TGY3 1603 aaPredicted RBP28.95■■■□□ 2.22
TMEM53-205ENST00000372244 DLC1Q96QB1 1528 aa28.94■■■□□ 2.22
TMEM53-205ENST00000372244 PHLPP1O60346 1717 aa28.92■■■□□ 2.22
TMEM53-205ENST00000372244 CDC42BPGQ6DT37 1551 aa28.92■■■□□ 2.22
TMEM53-205ENST00000372244 POGKQ9P215 609 aa28.91■■■□□ 2.22
TMEM53-205ENST00000372244 JCADQ9P266 1359 aa28.91■■■□□ 2.22
TMEM53-205ENST00000372244 COL16A1Q07092 1604 aaPredicted RBP28.9■■■□□ 2.22
TMEM53-205ENST00000372244 SAFB2Q14151 953 aaKnown RBP eCLIP28.9■■■□□ 2.22
TMEM53-205ENST00000372244 NBPF1Q3BBV0 1214 aa28.9■■■□□ 2.22
TMEM53-205ENST00000372244 MED1Q15648 1581 aaPredicted RBP28.89■■■□□ 2.22
TMEM53-205ENST00000372244 DDX17Q92841 729 aaKnown RBP28.89■■■□□ 2.22
TMEM53-205ENST00000372244 ESCO1Q5FWF5 840 aa28.86■■■□□ 2.21
TMEM53-205ENST00000372244 LRRC59Q96AG4 307 aaKnown RBP28.85■■■□□ 2.21
TMEM53-205ENST00000372244 NUTM2FA1L443 756 aa28.84■■■□□ 2.21
TMEM53-205ENST00000372244 KIAA1210Q9ULL0 1709 aa28.83■■■□□ 2.21
TMEM53-205ENST00000372244 SOS2Q07890 1332 aaPredicted RBP28.82■■■□□ 2.2
TMEM53-205ENST00000372244 NHSL1Q5SYE7 1610 aa28.82■■■□□ 2.2
TMEM53-205ENST00000372244 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
TMEM53-205ENST00000372244 SPATA31A6Q5VVP1 1343 aa28.8■■■□□ 2.2
TMEM53-205ENST00000372244 ILDR2Q71H61 639 aa28.79■■■□□ 2.2
TMEM53-205ENST00000372244 MINK1Q8N4C8 1332 aaPredicted RBP28.78■■■□□ 2.2
TMEM53-205ENST00000372244 FOXO3O43524 673 aa28.78■■■□□ 2.2
TMEM53-205ENST00000372244 HIRIP3Q9BW71 556 aaPredicted RBP28.78■■■□□ 2.2
TMEM53-205ENST00000372244 FMN2Q9NZ56 1722 aa28.76■■■□□ 2.2
TMEM53-205ENST00000372244 NPHP3Q7Z494 1330 aa28.75■■■□□ 2.19
TMEM53-205ENST00000372244 WASLO00401 505 aaPredicted RBP28.75■■■□□ 2.19
TMEM53-205ENST00000372244 NBPF8Q3BBV2 869 aa28.74■■■□□ 2.19
TMEM53-205ENST00000372244 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
TMEM53-205ENST00000372244 RGS17Q9UGC6 210 aaPredicted RBP28.74■■■□□ 2.19
TMEM53-205ENST00000372244 ADGRB2O60241 1585 aa28.73■■■□□ 2.19
TMEM53-205ENST00000372244 PHF8Q9UPP1 1060 aa28.72■■■□□ 2.19
TMEM53-205ENST00000372244 SHPRHQ149N8 1683 aa28.71■■■□□ 2.19
TMEM53-205ENST00000372244 ARHGEF28Q8N1W1 1705 aaKnown RBP28.71■■■□□ 2.19
TMEM53-205ENST00000372244 PNPLA6Q8IY17 1366 aa28.7■■■□□ 2.19
TMEM53-205ENST00000372244 ANKARQ7Z5J8 1434 aa28.7■■■□□ 2.19
TMEM53-205ENST00000372244 TONSLQ96HA7 1378 aa28.7■■■□□ 2.18
TMEM53-205ENST00000372244 PXDNQ92626 1479 aa28.68■■■□□ 2.18
TMEM53-205ENST00000372244 PRR36Q9H6K5 1346 aa28.67■■■□□ 2.18
TMEM53-205ENST00000372244 LRP6O75581 1613 aa28.67■■■□□ 2.18
TMEM53-205ENST00000372244 XPCQ01831 940 aaPredicted RBP28.66■■■□□ 2.18
TMEM53-205ENST00000372244 EIF3AQ14152 1382 aaKnown RBP28.66■■■□□ 2.18
TMEM53-205ENST00000372244 ROCK2O75116 1388 aaKnown RBP28.65■■■□□ 2.18
TMEM53-205ENST00000372244 CENPJQ9HC77 1338 aaPredicted RBP28.65■■■□□ 2.18
TMEM53-205ENST00000372244 CDK19Q9BWU1 502 aa28.65■■■□□ 2.18
TMEM53-205ENST00000372244 TRPM1Q7Z4N2 1603 aa28.64■■■□□ 2.18
TMEM53-205ENST00000372244 NUTM2BA6NNL0 878 aaPredicted RBP28.64■■■□□ 2.17
TMEM53-205ENST00000372244 NUTM2EB1AL46 878 aaPredicted RBP28.64■■■□□ 2.17
TMEM53-205ENST00000372244 KRT28Q7Z3Y7 464 aa28.64■■■□□ 2.17
TMEM53-205ENST00000372244 NUTM2AQ8IVF1 878 aaPredicted RBP28.64■■■□□ 2.17
TMEM53-205ENST00000372244 GPRASP1Q5JY77 1395 aa28.63■■■□□ 2.17
TMEM53-205ENST00000372244 RGPD8O14715 1765 aaPredicted RBP28.63■■■□□ 2.17
TMEM53-205ENST00000372244 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
TMEM53-205ENST00000372244 TULP4Q9NRJ4 1543 aa28.62■■■□□ 2.17
TMEM53-205ENST00000372244 PMFBP1Q8TBY8 1022 aa28.61■■■□□ 2.17
TMEM53-205ENST00000372244 NUDT16Q96DE0 195 aaKnown RBP28.61■■■□□ 2.17
TMEM53-205ENST00000372244 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
TMEM53-205ENST00000372244 CLSPNQ9HAW4 1339 aa28.61■■■□□ 2.17
TMEM53-205ENST00000372244 SPATA31A3Q5VYP0 1347 aa28.6■■■□□ 2.17
TMEM53-205ENST00000372244 PSME1Q06323 249 aa28.59■■■□□ 2.17
TMEM53-205ENST00000372244 MEX3CQ5U5Q3 659 aaKnown RBP28.59■■■□□ 2.17
TMEM53-205ENST00000372244 POTEAQ6S8J7 498 aa28.57■■■□□ 2.16
TMEM53-205ENST00000372244 CCDC61Q9Y6R9 512 aa28.55■■■□□ 2.16
TMEM53-205ENST00000372244 SBNO1A3KN83 1393 aa28.54■■■□□ 2.16
TMEM53-205ENST00000372244 ATP7BP35670 1465 aa28.54■■■□□ 2.16
TMEM53-205ENST00000372244 CARD11Q9BXL7 1154 aa28.53■■■□□ 2.16
TMEM53-205ENST00000372244 TIMELESSQ9UNS1 1208 aa28.53■■■□□ 2.16
TMEM53-205ENST00000372244 PLEKHG3A1L390 1219 aa28.51■■■□□ 2.15
TMEM53-205ENST00000372244 NGDNQ8NEJ9 315 aaKnown RBP28.51■■■□□ 2.15
TMEM53-205ENST00000372244 COL22A1Q8NFW1 1626 aaPredicted RBP28.51■■■□□ 2.15
TMEM53-205ENST00000372244 RALGAPBQ86X10 1494 aa28.51■■■□□ 2.15
TMEM53-205ENST00000372244 ZNF772Q68DY9 489 aaPredicted RBP28.5■■■□□ 2.15
TMEM53-205ENST00000372244 ADAMTS2O95450 1211 aa28.49■■■□□ 2.15
TMEM53-205ENST00000372244 SOCS7O14512 581 aa28.48■■■□□ 2.15
TMEM53-205ENST00000372244 SRPK2P78362 688 aaKnown RBP28.48■■■□□ 2.15
TMEM53-205ENST00000372244 CABP2Q9NPB3 220 aa28.48■■■□□ 2.15
TMEM53-205ENST00000372244 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
TMEM53-205ENST00000372244 C8orf37Q96NL8 207 aa28.47■■■□□ 2.15
TMEM53-205ENST00000372244 AFF2P51816 1311 aa28.46■■■□□ 2.15
TMEM53-205ENST00000372244 EVC2Q86UK5 1308 aa28.46■■■□□ 2.15
TMEM53-205ENST00000372244 POLR3AO14802 1390 aaPredicted RBP28.45■■■□□ 2.15
TMEM53-205ENST00000372244 NGLY1Q96IV0 654 aa28.45■■■□□ 2.14
TMEM53-205ENST00000372244 QRICH2Q9H0J4 1663 aa28.44■■■□□ 2.14
TMEM53-205ENST00000372244 ARHGEF10O15013 1369 aa28.44■■■□□ 2.14
TMEM53-205ENST00000372244 ACEP12821 1306 aa28.43■■■□□ 2.14
TMEM53-205ENST00000372244 FNBP4Q8N3X1 1017 aaPredicted RBP28.42■■■□□ 2.14
TMEM53-205ENST00000372244 SBNO2Q9Y2G9 1366 aa28.41■■■□□ 2.14
TMEM53-205ENST00000372244 LMOD2Q6P5Q4 547 aa28.41■■■□□ 2.14
TMEM53-205ENST00000372244 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
TMEM53-205ENST00000372244 CABLES1Q8TDN4 633 aa28.39■■■□□ 2.13
TMEM53-205ENST00000372244 CABP1Q9NZU7 370 aa28.39■■■□□ 2.13
TMEM53-205ENST00000372244 ITSN1Q15811 1721 aa28.39■■■□□ 2.13
TMEM53-205ENST00000372244 TRPM3Q9HCF6 1732 aaPredicted RBP28.38■■■□□ 2.13
TMEM53-205ENST00000372244 PPIP5K1Q6PFW1 1433 aa28.38■■■□□ 2.13
TMEM53-205ENST00000372244 TOPAZ1Q8N9V7 1692 aa28.37■■■□□ 2.13
TMEM53-205ENST00000372244 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
TMEM53-205ENST00000372244 QTRT2Q9H974 415 aaKnown RBP28.36■■■□□ 2.13
TMEM53-205ENST00000372244 USP21Q9UK80 565 aa28.34■■■□□ 2.13
TMEM53-205ENST00000372244 RXRBP28702 533 aa28.33■■■□□ 2.13
TMEM53-205ENST00000372244 ST20-MTHFSA0A0A6YYL1 179 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms