RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 NEUROD2Q15784 382 aa29.73■■■□□ 2.35
BRD3-202ENST00000371834 SIGLEC1Q9BZZ2 1709 aa29.73■■■□□ 2.35
BRD3-202ENST00000371834 SHPRHQ149N8 1683 aa29.73■■■□□ 2.35
BRD3-202ENST00000371834 RRP7AQ9Y3A4 280 aaKnown RBP29.73■■■□□ 2.35
BRD3-202ENST00000371834 NGEFQ8N5V2 710 aa29.71■■■□□ 2.35
BRD3-202ENST00000371834 CAMSAP1Q5T5Y3 1602 aa29.7■■■□□ 2.35
BRD3-202ENST00000371834 SENP3Q9H4L4 574 aaPredicted RBP29.7■■■□□ 2.35
BRD3-202ENST00000371834 LAS1LQ9Y4W2 734 aaKnown RBP29.69■■■□□ 2.34
BRD3-202ENST00000371834 GLI2P10070 1586 aa29.68■■■□□ 2.34
BRD3-202ENST00000371834 MTHFSP49914 203 aa29.68■■■□□ 2.34
BRD3-202ENST00000371834 RGS3P49796 1198 aa29.66■■■□□ 2.34
BRD3-202ENST00000371834 RTL5Q5HYW3 569 aaPredicted RBP29.66■■■□□ 2.34
BRD3-202ENST00000371834 RUNDC1Q96C34 613 aa29.66■■■□□ 2.34
BRD3-202ENST00000371834 CGNL1Q0VF96 1302 aa29.65■■■□□ 2.34
BRD3-202ENST00000371834 TCP11L2Q8N4U5 519 aa29.65■■■□□ 2.34
BRD3-202ENST00000371834 SAFB2Q14151 953 aaKnown RBP eCLIP29.65■■■□□ 2.34
BRD3-202ENST00000371834 VGFO15240 615 aaPredicted RBP29.64■■■□□ 2.34
BRD3-202ENST00000371834 NEXMIFQ5QGS0 1516 aa29.63■■■□□ 2.33
BRD3-202ENST00000371834 TULP4Q9NRJ4 1543 aa29.63■■■□□ 2.33
BRD3-202ENST00000371834 C8orf34Q49A92 452 aa29.63■■■□□ 2.33
BRD3-202ENST00000371834 CABP2Q9NPB3 220 aa29.63■■■□□ 2.33
BRD3-202ENST00000371834 EVC2Q86UK5 1308 aa29.63■■■□□ 2.33
BRD3-202ENST00000371834 PIK3C2BO00750 1634 aa29.62■■■□□ 2.33
BRD3-202ENST00000371834 FAM161AQ3B820 660 aa29.62■■■□□ 2.33
BRD3-202ENST00000371834 PANK1Q8TE04 598 aa29.62■■■□□ 2.33
BRD3-202ENST00000371834 ARHGEF28Q8N1W1 1705 aaKnown RBP29.61■■■□□ 2.33
BRD3-202ENST00000371834 IDI1Q13907 227 aa29.61■■■□□ 2.33
BRD3-202ENST00000371834 IGHDP01880 384 aa29.61■■■□□ 2.33
BRD3-202ENST00000371834 IQSEC2Q5JU85 1478 aa29.6■■■□□ 2.33
BRD3-202ENST00000371834 CANXP27824 592 aaKnown RBP29.6■■■□□ 2.33
BRD3-202ENST00000371834 USP32Q8NFA0 1604 aa29.6■■■□□ 2.33
BRD3-202ENST00000371834 DIP2CQ9Y2E4 1556 aa29.6■■■□□ 2.33
BRD3-202ENST00000371834 COG6Q9Y2V7 657 aa29.59■■■□□ 2.33
BRD3-202ENST00000371834 PDE3AQ14432 1141 aa29.59■■■□□ 2.33
BRD3-202ENST00000371834 NEO1Q92859 1461 aa29.58■■■□□ 2.33
BRD3-202ENST00000371834 ANKRD36BQ8N2N9 1353 aa29.58■■■□□ 2.33
BRD3-202ENST00000371834 FRAT1Q92837 279 aaPredicted RBP29.58■■■□□ 2.33
BRD3-202ENST00000371834 DDRGK1Q96HY6 314 aa29.58■■■□□ 2.33
BRD3-202ENST00000371834 STK26Q9P289 416 aa29.58■■■□□ 2.33
BRD3-202ENST00000371834 CFAP53Q96M91 514 aa29.56■■■□□ 2.32
BRD3-202ENST00000371834 PHF23Q9BUL5 403 aaPredicted RBP29.56■■■□□ 2.32
BRD3-202ENST00000371834 SLC4A3P48751 1232 aa29.53■■■□□ 2.32
BRD3-202ENST00000371834 RARSP54136 660 aaKnown RBP29.53■■■□□ 2.32
BRD3-202ENST00000371834 PUS7Q96PZ0 661 aaKnown RBP29.53■■■□□ 2.32
BRD3-202ENST00000371834 NEFMP07197 916 aa29.52■■■□□ 2.32
BRD3-202ENST00000371834 CLUAP1Q96AJ1 413 aa29.52■■■□□ 2.32
BRD3-202ENST00000371834 YEATS2Q9ULM3 1422 aa29.52■■■□□ 2.32
BRD3-202ENST00000371834 U2AF1L5P0DN76 240 aaPredicted RBP29.51■■■□□ 2.31
BRD3-202ENST00000371834 U2AF1Q01081 240 aaKnown RBP eCLIP29.51■■■□□ 2.31
BRD3-202ENST00000371834 WDR63Q8IWG1 891 aa29.51■■■□□ 2.31
BRD3-202ENST00000371834 BCL2L13Q9BXK5 485 aa29.5■■■□□ 2.31
BRD3-202ENST00000371834 TNNQ9UQP3 1299 aa29.5■■■□□ 2.31
BRD3-202ENST00000371834 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
BRD3-202ENST00000371834 NINLQ9Y2I6 1382 aa29.5■■■□□ 2.31
BRD3-202ENST00000371834 SRPK2P78362 688 aaKnown RBP29.48■■■□□ 2.31
BRD3-202ENST00000371834 A0A1W2PP64 1363 aa29.48■■■□□ 2.31
BRD3-202ENST00000371834 NSD2O96028 1365 aa29.48■■■□□ 2.31
BRD3-202ENST00000371834 RICTORQ6R327 1708 aa29.47■■■□□ 2.31
BRD3-202ENST00000371834 CCDC27Q2M243 656 aa29.46■■■□□ 2.31
BRD3-202ENST00000371834 MYO5BQ9ULV0 1848 aa29.46■■■□□ 2.31
BRD3-202ENST00000371834 RLBP1P12271 317 aa29.46■■■□□ 2.31
BRD3-202ENST00000371834 SLC52A1Q9NWF4 448 aa29.46■■■□□ 2.31
BRD3-202ENST00000371834 GGNBP2Q9H3C7 697 aa29.45■■■□□ 2.31
BRD3-202ENST00000371834 PPM1GO15355 546 aaPredicted RBP29.44■■■□□ 2.3
BRD3-202ENST00000371834 MINK1Q8N4C8 1332 aaPredicted RBP29.44■■■□□ 2.3
BRD3-202ENST00000371834 ZFYVE9O95405 1425 aa29.43■■■□□ 2.3
BRD3-202ENST00000371834 ABCC11Q96J66 1382 aa29.41■■■□□ 2.3
BRD3-202ENST00000371834 PRAM1Q96QH2 718 aa29.41■■■□□ 2.3
BRD3-202ENST00000371834 FBXO31Q5XUX0 539 aaPredicted RBP29.4■■■□□ 2.3
BRD3-202ENST00000371834 PTPRMP28827 1452 aa29.39■■■□□ 2.3
BRD3-202ENST00000371834 U2SURPO15042 1029 aaKnown RBP29.39■■■□□ 2.3
BRD3-202ENST00000371834 MYH16Q9H6N6 1097 aa29.39■■■□□ 2.3
BRD3-202ENST00000371834 PCDHB15Q9Y5E8 787 aa29.39■■■□□ 2.3
BRD3-202ENST00000371834 TMEM131LA2VDJ0 1609 aa29.39■■■□□ 2.29
BRD3-202ENST00000371834 USP35Q9P2H5 1018 aa29.38■■■□□ 2.29
BRD3-202ENST00000371834 DAXXQ9UER7 740 aaPredicted RBP29.38■■■□□ 2.29
BRD3-202ENST00000371834 PREX1Q8TCU6 1659 aa29.38■■■□□ 2.29
BRD3-202ENST00000371834 POGKQ9P215 609 aa29.37■■■□□ 2.29
BRD3-202ENST00000371834 ADGRB2O60241 1585 aa29.36■■■□□ 2.29
BRD3-202ENST00000371834 TSR2Q969E8 191 aaKnown RBP29.36■■■□□ 2.29
BRD3-202ENST00000371834 FYB1O15117 783 aa29.35■■■□□ 2.29
BRD3-202ENST00000371834 YTHDC2Q9H6S0 1430 aaKnown RBP29.34■■■□□ 2.29
BRD3-202ENST00000371834 PLEKHF1Q96S99 279 aa29.34■■■□□ 2.29
BRD3-202ENST00000371834 MAPK8IP3Q9UPT6 1336 aa29.32■■■□□ 2.28
BRD3-202ENST00000371834 CD163L1Q9NR16 1453 aa29.32■■■□□ 2.28
BRD3-202ENST00000371834 NCBP3Q53F19 620 aaKnown RBP29.32■■■□□ 2.28
BRD3-202ENST00000371834 TERF2IPQ9NYB0 399 aa29.32■■■□□ 2.28
BRD3-202ENST00000371834 ATAD2Q6PL18 1390 aa29.32■■■□□ 2.28
BRD3-202ENST00000371834 SEC24BO95487 1268 aa29.31■■■□□ 2.28
BRD3-202ENST00000371834 PMFBP1Q8TBY8 1022 aa29.31■■■□□ 2.28
BRD3-202ENST00000371834 COL3A1P02461 1466 aaPredicted RBP29.31■■■□□ 2.28
BRD3-202ENST00000371834 USP19O94966 1318 aa29.3■■■□□ 2.28
BRD3-202ENST00000371834 TMPOP42166 694 aaKnown RBP29.3■■■□□ 2.28
BRD3-202ENST00000371834 TRIM35Q9UPQ4 493 aa29.29■■■□□ 2.28
BRD3-202ENST00000371834 VIRMAQ69YN4 1812 aaKnown RBP29.28■■■□□ 2.28
BRD3-202ENST00000371834 EXOSC9Q06265 439 aaKnown RBP29.27■■■□□ 2.28
BRD3-202ENST00000371834 NFKBIBQ15653 356 aa29.27■■■□□ 2.28
BRD3-202ENST00000371834 CDK19Q9BWU1 502 aa29.27■■■□□ 2.28
BRD3-202ENST00000371834 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
BRD3-202ENST00000371834 AAMPQ13685 434 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms