RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 RALYLQ86SE5 291 aaKnown RBP19.02■□□□□ 0.64
PRDM1-203ENST00000369096 IGF1RP08069 1367 aa19.02■□□□□ 0.64
PRDM1-203ENST00000369096 FKBP5Q13451 457 aaPredicted RBP19.02■□□□□ 0.63
PRDM1-203ENST00000369096 API5Q9BZZ5 524 aaKnown RBP19.02■□□□□ 0.63
PRDM1-203ENST00000369096 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.63
PRDM1-203ENST00000369096 APAF1O14727 1248 aa19.01■□□□□ 0.63
PRDM1-203ENST00000369096 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
PRDM1-203ENST00000369096 SKIDA1Q1XH10 827 aa19.01■□□□□ 0.63
PRDM1-203ENST00000369096 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
PRDM1-203ENST00000369096 PAF1Q8N7H5 531 aa19.01■□□□□ 0.63
PRDM1-203ENST00000369096 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
PRDM1-203ENST00000369096 FANCD2Q9BXW9 1451 aa19■□□□□ 0.63
PRDM1-203ENST00000369096 RNF214Q8ND24 703 aa19■□□□□ 0.63
PRDM1-203ENST00000369096 SYTL4Q96C24 671 aaPredicted RBP19■□□□□ 0.63
PRDM1-203ENST00000369096 RDXP35241 583 aaKnown RBP19■□□□□ 0.63
PRDM1-203ENST00000369096 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
PRDM1-203ENST00000369096 TSPYL1Q9H0U9 437 aa19■□□□□ 0.63
PRDM1-203ENST00000369096 INTS3Q68E01 1043 aaKnown RBP18.99■□□□□ 0.63
PRDM1-203ENST00000369096 ERCC4Q92889 916 aaPredicted RBP18.99■□□□□ 0.63
PRDM1-203ENST00000369096 PLCD4Q9BRC7 762 aa18.99■□□□□ 0.63
PRDM1-203ENST00000369096 NAT10Q9H0A0 1025 aaKnown RBP18.99■□□□□ 0.63
PRDM1-203ENST00000369096 CWC15Q9P013 229 aaKnown RBP18.99■□□□□ 0.63
PRDM1-203ENST00000369096 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
PRDM1-203ENST00000369096 WASHC4Q2M389 1173 aa18.97■□□□□ 0.63
PRDM1-203ENST00000369096 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
PRDM1-203ENST00000369096 MTMR7Q9Y216 660 aa18.96■□□□□ 0.63
PRDM1-203ENST00000369096 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.62
PRDM1-203ENST00000369096 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
PRDM1-203ENST00000369096 ERC2O15083 957 aa18.95■□□□□ 0.62
PRDM1-203ENST00000369096 FYB1O15117 783 aa18.95■□□□□ 0.62
PRDM1-203ENST00000369096 NASPP49321 788 aaPredicted RBP18.95■□□□□ 0.62
PRDM1-203ENST00000369096 BRMS1Q9HCU9 246 aa18.95■□□□□ 0.62
PRDM1-203ENST00000369096 MYO6Q9UM54 1294 aa18.95■□□□□ 0.62
PRDM1-203ENST00000369096 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
PRDM1-203ENST00000369096 AXDND1Q5T1B0 1012 aaPredicted RBP18.94■□□□□ 0.62
PRDM1-203ENST00000369096 CCDC39Q9UFE4 941 aa18.94■□□□□ 0.62
PRDM1-203ENST00000369096 ATP2B1P20020 1258 aa18.94■□□□□ 0.62
PRDM1-203ENST00000369096 HSP90AB4PQ58FF6 505 aa18.94■□□□□ 0.62
PRDM1-203ENST00000369096 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
PRDM1-203ENST00000369096 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
PRDM1-203ENST00000369096 NEFHP12036 1026 aa18.93■□□□□ 0.62
PRDM1-203ENST00000369096 FMNL2Q96PY5 1086 aa18.93■□□□□ 0.62
PRDM1-203ENST00000369096 RIPK4P57078 832 aa18.93■□□□□ 0.62
PRDM1-203ENST00000369096 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
PRDM1-203ENST00000369096 XBP1P17861 261 aa18.92■□□□□ 0.62
PRDM1-203ENST00000369096 KDM4AO75164 1064 aa18.92■□□□□ 0.62
PRDM1-203ENST00000369096 CCDC66A2RUB6 948 aa18.92■□□□□ 0.62
PRDM1-203ENST00000369096 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
PRDM1-203ENST00000369096 DIAPH1O60610 1272 aaKnown RBP18.91■□□□□ 0.62
PRDM1-203ENST00000369096 MRE11P49959 708 aa18.91■□□□□ 0.62
PRDM1-203ENST00000369096 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
PRDM1-203ENST00000369096 MTERF4Q7Z6M4 381 aaKnown RBP18.91■□□□□ 0.62
PRDM1-203ENST00000369096 CARMIL2Q6F5E8 1435 aa18.91■□□□□ 0.62
PRDM1-203ENST00000369096 IKQ13123 557 aaPredicted RBP18.91■□□□□ 0.62
PRDM1-203ENST00000369096 ROCK1Q13464 1354 aa18.9■□□□□ 0.62
PRDM1-203ENST00000369096 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
PRDM1-203ENST00000369096 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
PRDM1-203ENST00000369096 SMC2O95347 1197 aa18.9■□□□□ 0.62
PRDM1-203ENST00000369096 EVC2Q86UK5 1308 aa18.9■□□□□ 0.62
PRDM1-203ENST00000369096 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
PRDM1-203ENST00000369096 FANCIQ9NVI1 1328 aa18.9■□□□□ 0.62
PRDM1-203ENST00000369096 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
PRDM1-203ENST00000369096 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.61
PRDM1-203ENST00000369096 BRPF1P55201 1214 aaPredicted RBP18.89■□□□□ 0.61
PRDM1-203ENST00000369096 KINO60870 393 aaKnown RBP18.88■□□□□ 0.61
PRDM1-203ENST00000369096 NFKBIBQ15653 356 aa18.88■□□□□ 0.61
PRDM1-203ENST00000369096 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
PRDM1-203ENST00000369096 TMEM132AQ24JP5 1023 aa18.87■□□□□ 0.61
PRDM1-203ENST00000369096 FILIP1LQ4L180 1135 aa18.87■□□□□ 0.61
PRDM1-203ENST00000369096 LEKR1Q6ZMV7 388 aa18.87■□□□□ 0.61
PRDM1-203ENST00000369096 ZRSR2Q15696 482 aaKnown RBP18.87■□□□□ 0.61
PRDM1-203ENST00000369096 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.87■□□□□ 0.61
PRDM1-203ENST00000369096 SMARCE1Q969G3 411 aa18.87■□□□□ 0.61
PRDM1-203ENST00000369096 ANKRD62A6NC57 917 aa18.86■□□□□ 0.61
PRDM1-203ENST00000369096 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
PRDM1-203ENST00000369096 AIMP1Q12904 312 aaKnown RBP18.86■□□□□ 0.61
PRDM1-203ENST00000369096 CAVIN1Q6NZI2 390 aaKnown RBP18.86■□□□□ 0.61
PRDM1-203ENST00000369096 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
PRDM1-203ENST00000369096 RIC3Q7Z5B4 369 aa18.86■□□□□ 0.61
PRDM1-203ENST00000369096 SYCP1Q15431 976 aa18.85■□□□□ 0.61
PRDM1-203ENST00000369096 FHOD3Q2V2M9 1422 aa18.85■□□□□ 0.61
PRDM1-203ENST00000369096 CDC45O75419 566 aa18.85■□□□□ 0.61
PRDM1-203ENST00000369096 PSMA5P28066 241 aa18.85■□□□□ 0.61
PRDM1-203ENST00000369096 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
PRDM1-203ENST00000369096 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
PRDM1-203ENST00000369096 MAGEC2Q9UBF1 373 aaPredicted RBP18.84■□□□□ 0.61
PRDM1-203ENST00000369096 FSD1Q9BTV5 496 aa18.84■□□□□ 0.61
PRDM1-203ENST00000369096 SART3Q15020 963 aaKnown RBP18.84■□□□□ 0.61
PRDM1-203ENST00000369096 CDK5RAP3Q96JB5 506 aa18.84■□□□□ 0.61
PRDM1-203ENST00000369096 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
PRDM1-203ENST00000369096 CCAR1Q8IX12 1150 aaKnown RBP18.83■□□□□ 0.6
PRDM1-203ENST00000369096 MBD3O95983 291 aa18.82■□□□□ 0.6
PRDM1-203ENST00000369096 KRT18P05783 430 aaKnown RBP18.82■□□□□ 0.6
PRDM1-203ENST00000369096 RSPH4AQ5TD94 716 aa18.82■□□□□ 0.6
PRDM1-203ENST00000369096 PDCL3Q9H2J4 239 aa18.82■□□□□ 0.6
PRDM1-203ENST00000369096 TRAK2O60296 914 aa18.82■□□□□ 0.6
PRDM1-203ENST00000369096 ERLIN2O94905 339 aa18.82■□□□□ 0.6
PRDM1-203ENST00000369096 UBTFL1P0CB47 393 aaPredicted RBP18.82■□□□□ 0.6
PRDM1-203ENST00000369096 GNAI1P63096 354 aa18.82■□□□□ 0.6
PRDM1-203ENST00000369096 CCP110O43303 1012 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms