RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 PHLPP1O60346 1717 aa26.62■■□□□ 1.85
CHTOP-202ENST00000368687 AHDC1Q5TGY3 1603 aaPredicted RBP26.62■■□□□ 1.85
CHTOP-202ENST00000368687 WAPLQ7Z5K2 1190 aa26.61■■□□□ 1.85
CHTOP-202ENST00000368687 TONSLQ96HA7 1378 aa26.6■■□□□ 1.85
CHTOP-202ENST00000368687 POGKQ9P215 609 aa26.6■■□□□ 1.85
CHTOP-202ENST00000368687 C1orf167Q5SNV9 1468 aa26.6■■□□□ 1.85
CHTOP-202ENST00000368687 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
CHTOP-202ENST00000368687 COL16A1Q07092 1604 aaPredicted RBP26.59■■□□□ 1.85
CHTOP-202ENST00000368687 BRINP3Q76B58 766 aa26.59■■□□□ 1.85
CHTOP-202ENST00000368687 PRAM1Q96QH2 718 aa26.59■■□□□ 1.85
CHTOP-202ENST00000368687 PLEKHH1Q9ULM0 1364 aa26.58■■□□□ 1.85
CHTOP-202ENST00000368687 ADGRB2O60241 1585 aa26.58■■□□□ 1.85
CHTOP-202ENST00000368687 ARHGEF28Q8N1W1 1705 aaKnown RBP26.57■■□□□ 1.84
CHTOP-202ENST00000368687 PHF23Q9BUL5 403 aaPredicted RBP26.57■■□□□ 1.84
CHTOP-202ENST00000368687 TRAK1Q9UPV9 953 aa26.57■■□□□ 1.84
CHTOP-202ENST00000368687 NHSL1Q5SYE7 1610 aa26.56■■□□□ 1.84
CHTOP-202ENST00000368687 FMN2Q9NZ56 1722 aa26.56■■□□□ 1.84
CHTOP-202ENST00000368687 TRPM1Q7Z4N2 1603 aa26.54■■□□□ 1.84
CHTOP-202ENST00000368687 EIF3AQ14152 1382 aaKnown RBP26.53■■□□□ 1.84
CHTOP-202ENST00000368687 JCADQ9P266 1359 aa26.53■■□□□ 1.84
CHTOP-202ENST00000368687 SOCS7O14512 581 aa26.52■■□□□ 1.84
CHTOP-202ENST00000368687 RGS17Q9UGC6 210 aaPredicted RBP26.5■■□□□ 1.83
CHTOP-202ENST00000368687 KIF1AQ12756 1690 aa26.48■■□□□ 1.83
CHTOP-202ENST00000368687 ANKARQ7Z5J8 1434 aa26.48■■□□□ 1.83
CHTOP-202ENST00000368687 SAFB2Q14151 953 aaKnown RBP eCLIP26.47■■□□□ 1.83
CHTOP-202ENST00000368687 ROCK2O75116 1388 aaKnown RBP26.46■■□□□ 1.83
CHTOP-202ENST00000368687 NBPF1Q3BBV0 1214 aa26.46■■□□□ 1.83
CHTOP-202ENST00000368687 SHPRHQ149N8 1683 aa26.45■■□□□ 1.82
CHTOP-202ENST00000368687 ESCO1Q5FWF5 840 aa26.45■■□□□ 1.82
CHTOP-202ENST00000368687 DDX17Q92841 729 aaKnown RBP26.45■■□□□ 1.82
CHTOP-202ENST00000368687 TIMELESSQ9UNS1 1208 aa26.44■■□□□ 1.82
CHTOP-202ENST00000368687 NPHP3Q7Z494 1330 aa26.43■■□□□ 1.82
CHTOP-202ENST00000368687 ORAI2Q96SN7 254 aa26.43■■□□□ 1.82
CHTOP-202ENST00000368687 LRRC59Q96AG4 307 aaKnown RBP26.42■■□□□ 1.82
CHTOP-202ENST00000368687 LRP6O75581 1613 aa26.42■■□□□ 1.82
CHTOP-202ENST00000368687 GPRASP1Q5JY77 1395 aa26.42■■□□□ 1.82
CHTOP-202ENST00000368687 TULP4Q9NRJ4 1543 aa26.41■■□□□ 1.82
CHTOP-202ENST00000368687 RALGAPBQ86X10 1494 aa26.41■■□□□ 1.82
CHTOP-202ENST00000368687 SPATA31A6Q5VVP1 1343 aa26.4■■□□□ 1.82
CHTOP-202ENST00000368687 MINK1Q8N4C8 1332 aaPredicted RBP26.4■■□□□ 1.82
CHTOP-202ENST00000368687 CENPJQ9HC77 1338 aaPredicted RBP26.39■■□□□ 1.82
CHTOP-202ENST00000368687 WASLO00401 505 aaPredicted RBP26.39■■□□□ 1.82
CHTOP-202ENST00000368687 RGPD8O14715 1765 aaPredicted RBP26.38■■□□□ 1.81
CHTOP-202ENST00000368687 SOS2Q07890 1332 aaPredicted RBP26.38■■□□□ 1.81
CHTOP-202ENST00000368687 ITSN1Q15811 1721 aa26.37■■□□□ 1.81
CHTOP-202ENST00000368687 HIRIP3Q9BW71 556 aaPredicted RBP26.37■■□□□ 1.81
CHTOP-202ENST00000368687 QRICH2Q9H0J4 1663 aa26.37■■□□□ 1.81
CHTOP-202ENST00000368687 NUTM2FA1L443 756 aa26.36■■□□□ 1.81
CHTOP-202ENST00000368687 NBPF8Q3BBV2 869 aa26.36■■□□□ 1.81
CHTOP-202ENST00000368687 USP32Q8NFA0 1604 aa26.36■■□□□ 1.81
CHTOP-202ENST00000368687 CCER1Q8TC90 406 aaPredicted RBP26.35■■□□□ 1.81
CHTOP-202ENST00000368687 POTEAQ6S8J7 498 aa26.34■■□□□ 1.81
CHTOP-202ENST00000368687 PHF8Q9UPP1 1060 aa26.33■■□□□ 1.81
CHTOP-202ENST00000368687 PXDNQ92626 1479 aa26.33■■□□□ 1.81
CHTOP-202ENST00000368687 FOXO3O43524 673 aa26.31■■□□□ 1.8
CHTOP-202ENST00000368687 CARD11Q9BXL7 1154 aa26.31■■□□□ 1.8
CHTOP-202ENST00000368687 PNPLA6Q8IY17 1366 aa26.31■■□□□ 1.8
CHTOP-202ENST00000368687 NUTM2BA6NNL0 878 aaPredicted RBP26.29■■□□□ 1.8
CHTOP-202ENST00000368687 NUTM2EB1AL46 878 aaPredicted RBP26.29■■□□□ 1.8
CHTOP-202ENST00000368687 NUTM2AQ8IVF1 878 aaPredicted RBP26.29■■□□□ 1.8
CHTOP-202ENST00000368687 ATP7BP35670 1465 aa26.29■■□□□ 1.8
CHTOP-202ENST00000368687 MEX3CQ5U5Q3 659 aaKnown RBP26.28■■□□□ 1.8
CHTOP-202ENST00000368687 PSME1Q06323 249 aa26.27■■□□□ 1.8
CHTOP-202ENST00000368687 CDK19Q9BWU1 502 aa26.27■■□□□ 1.8
CHTOP-202ENST00000368687 COL22A1Q8NFW1 1626 aaPredicted RBP26.26■■□□□ 1.79
CHTOP-202ENST00000368687 SBNO2Q9Y2G9 1366 aa26.26■■□□□ 1.79
CHTOP-202ENST00000368687 TOPAZ1Q8N9V7 1692 aa26.25■■□□□ 1.79
CHTOP-202ENST00000368687 PRR36Q9H6K5 1346 aa26.25■■□□□ 1.79
CHTOP-202ENST00000368687 EVC2Q86UK5 1308 aa26.24■■□□□ 1.79
CHTOP-202ENST00000368687 NUDT16Q96DE0 195 aaKnown RBP26.24■■□□□ 1.79
CHTOP-202ENST00000368687 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
CHTOP-202ENST00000368687 SBNO1A3KN83 1393 aa26.22■■□□□ 1.79
CHTOP-202ENST00000368687 KRT28Q7Z3Y7 464 aa26.22■■□□□ 1.79
CHTOP-202ENST00000368687 SLC24A1O60721 1099 aa26.21■■□□□ 1.79
CHTOP-202ENST00000368687 SRPK2P78362 688 aaKnown RBP26.21■■□□□ 1.79
CHTOP-202ENST00000368687 XPCQ01831 940 aaPredicted RBP26.21■■□□□ 1.79
CHTOP-202ENST00000368687 TNS3Q68CZ2 1445 aa26.2■■□□□ 1.78
CHTOP-202ENST00000368687 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
CHTOP-202ENST00000368687 NGDNQ8NEJ9 315 aaKnown RBP26.19■■□□□ 1.78
CHTOP-202ENST00000368687 PMFBP1Q8TBY8 1022 aa26.19■■□□□ 1.78
CHTOP-202ENST00000368687 ARHGEF10O15013 1369 aa26.19■■□□□ 1.78
CHTOP-202ENST00000368687 ZNF772Q68DY9 489 aaPredicted RBP26.16■■□□□ 1.78
CHTOP-202ENST00000368687 POLR3AO14802 1390 aaPredicted RBP26.16■■□□□ 1.78
CHTOP-202ENST00000368687 TRPM3Q9HCF6 1732 aaPredicted RBP26.15■■□□□ 1.78
CHTOP-202ENST00000368687 PLEKHG3A1L390 1219 aa26.15■■□□□ 1.78
CHTOP-202ENST00000368687 ATAD2Q6PL18 1390 aa26.14■■□□□ 1.78
CHTOP-202ENST00000368687 PPIP5K1Q6PFW1 1433 aa26.14■■□□□ 1.77
CHTOP-202ENST00000368687 AFF2P51816 1311 aa26.14■■□□□ 1.77
CHTOP-202ENST00000368687 C8orf37Q96NL8 207 aa26.13■■□□□ 1.77
CHTOP-202ENST00000368687 ADAMTS2O95450 1211 aa26.12■■□□□ 1.77
CHTOP-202ENST00000368687 CABP2Q9NPB3 220 aa26.12■■□□□ 1.77
CHTOP-202ENST00000368687 BRD4O60885 1362 aaPredicted RBP26.11■■□□□ 1.77
CHTOP-202ENST00000368687 ALS2Q96Q42 1657 aa26.1■■□□□ 1.77
CHTOP-202ENST00000368687 MARF1Q9Y4F3 1742 aaKnown RBP26.09■■□□□ 1.77
CHTOP-202ENST00000368687 ACEP12821 1306 aa26.09■■□□□ 1.77
CHTOP-202ENST00000368687 USP47Q96K76 1375 aa26.08■■□□□ 1.77
CHTOP-202ENST00000368687 PUS7Q96PZ0 661 aaKnown RBP26.08■■□□□ 1.77
CHTOP-202ENST00000368687 LMOD2Q6P5Q4 547 aa26.05■■□□□ 1.76
CHTOP-202ENST00000368687 ST20-MTHFSA0A0A6YYL1 179 aa26.04■■□□□ 1.76
CHTOP-202ENST00000368687 NGLY1Q96IV0 654 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms