RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TRAK1Q9UPV9 953 aa32.36■■■□□ 2.77
ECHDC1-203ENST00000368291 PHLPP1O60346 1717 aa32.36■■■□□ 2.77
ECHDC1-203ENST00000368291 TRPM1Q7Z4N2 1603 aa32.35■■■□□ 2.77
ECHDC1-203ENST00000368291 NBPF1Q3BBV0 1214 aa32.35■■■□□ 2.77
ECHDC1-203ENST00000368291 PRAM1Q96QH2 718 aa32.35■■■□□ 2.77
ECHDC1-203ENST00000368291 C1orf167Q5SNV9 1468 aa32.33■■■□□ 2.77
ECHDC1-203ENST00000368291 BRINP3Q76B58 766 aa32.33■■■□□ 2.77
ECHDC1-203ENST00000368291 FMN2Q9NZ56 1722 aa32.32■■■□□ 2.76
ECHDC1-203ENST00000368291 AHDC1Q5TGY3 1603 aaPredicted RBP32.31■■■□□ 2.76
ECHDC1-203ENST00000368291 COL16A1Q07092 1604 aaPredicted RBP32.29■■■□□ 2.76
ECHDC1-203ENST00000368291 NHSL1Q5SYE7 1610 aa32.29■■■□□ 2.76
ECHDC1-203ENST00000368291 SAFB2Q14151 953 aaKnown RBP eCLIP32.29■■■□□ 2.76
ECHDC1-203ENST00000368291 TONSLQ96HA7 1378 aa32.28■■■□□ 2.76
ECHDC1-203ENST00000368291 POGKQ9P215 609 aa32.27■■■□□ 2.76
ECHDC1-203ENST00000368291 RGPD8O14715 1765 aaPredicted RBP32.26■■■□□ 2.76
ECHDC1-203ENST00000368291 ADGRB2O60241 1585 aa32.26■■■□□ 2.76
ECHDC1-203ENST00000368291 NBPF8Q3BBV2 869 aa32.26■■■□□ 2.75
ECHDC1-203ENST00000368291 ORAI2Q96SN7 254 aa32.23■■■□□ 2.75
ECHDC1-203ENST00000368291 CLSPNQ9HAW4 1339 aa32.2■■■□□ 2.75
ECHDC1-203ENST00000368291 NUTM2FA1L443 756 aa32.19■■■□□ 2.74
ECHDC1-203ENST00000368291 DDX17Q92841 729 aaKnown RBP32.18■■■□□ 2.74
ECHDC1-203ENST00000368291 MINK1Q8N4C8 1332 aaPredicted RBP32.18■■■□□ 2.74
ECHDC1-203ENST00000368291 USP32Q8NFA0 1604 aa32.17■■■□□ 2.74
ECHDC1-203ENST00000368291 HIRIP3Q9BW71 556 aaPredicted RBP32.16■■■□□ 2.74
ECHDC1-203ENST00000368291 ROCK2O75116 1388 aaKnown RBP32.14■■■□□ 2.74
ECHDC1-203ENST00000368291 MED1Q15648 1581 aaPredicted RBP32.14■■■□□ 2.73
ECHDC1-203ENST00000368291 ESCO1Q5FWF5 840 aa32.13■■■□□ 2.73
ECHDC1-203ENST00000368291 GPRASP1Q5JY77 1395 aa32.12■■■□□ 2.73
ECHDC1-203ENST00000368291 RALGAPBQ86X10 1494 aa32.11■■■□□ 2.73
ECHDC1-203ENST00000368291 QRICH2Q9H0J4 1663 aa32.11■■■□□ 2.73
ECHDC1-203ENST00000368291 SHPRHQ149N8 1683 aa32.1■■■□□ 2.73
ECHDC1-203ENST00000368291 KIF1AQ12756 1690 aa32.09■■■□□ 2.73
ECHDC1-203ENST00000368291 JCADQ9P266 1359 aa32.09■■■□□ 2.73
ECHDC1-203ENST00000368291 ANKARQ7Z5J8 1434 aa32.07■■■□□ 2.73
ECHDC1-203ENST00000368291 WASLO00401 505 aaPredicted RBP32.07■■■□□ 2.73
ECHDC1-203ENST00000368291 TULP4Q9NRJ4 1543 aa32.06■■■□□ 2.72
ECHDC1-203ENST00000368291 SOS2Q07890 1332 aaPredicted RBP32.06■■■□□ 2.72
ECHDC1-203ENST00000368291 CCER1Q8TC90 406 aaPredicted RBP32.06■■■□□ 2.72
ECHDC1-203ENST00000368291 PRR36Q9H6K5 1346 aa32.05■■■□□ 2.72
ECHDC1-203ENST00000368291 CENPJQ9HC77 1338 aaPredicted RBP32.05■■■□□ 2.72
ECHDC1-203ENST00000368291 PXDNQ92626 1479 aa32.03■■■□□ 2.72
ECHDC1-203ENST00000368291 FOXO3O43524 673 aa32.02■■■□□ 2.72
ECHDC1-203ENST00000368291 LRRC59Q96AG4 307 aaKnown RBP32.01■■■□□ 2.71
ECHDC1-203ENST00000368291 NPHP3Q7Z494 1330 aa32.01■■■□□ 2.71
ECHDC1-203ENST00000368291 EIF3AQ14152 1382 aaKnown RBP32■■■□□ 2.71
ECHDC1-203ENST00000368291 DISP3Q9P2K9 1392 aa32■■■□□ 2.71
ECHDC1-203ENST00000368291 TIMELESSQ9UNS1 1208 aa32■■■□□ 2.71
ECHDC1-203ENST00000368291 PHF8Q9UPP1 1060 aa31.99■■■□□ 2.71
ECHDC1-203ENST00000368291 ATP7BP35670 1465 aa31.99■■■□□ 2.71
ECHDC1-203ENST00000368291 ITSN1Q15811 1721 aa31.99■■■□□ 2.71
ECHDC1-203ENST00000368291 CDK19Q9BWU1 502 aa31.98■■■□□ 2.71
ECHDC1-203ENST00000368291 CARD11Q9BXL7 1154 aa31.98■■■□□ 2.71
ECHDC1-203ENST00000368291 TOPAZ1Q8N9V7 1692 aa31.96■■■□□ 2.71
ECHDC1-203ENST00000368291 PNPLA6Q8IY17 1366 aa31.96■■■□□ 2.71
ECHDC1-203ENST00000368291 XPCQ01831 940 aaPredicted RBP31.95■■■□□ 2.71
ECHDC1-203ENST00000368291 LRP6O75581 1613 aa31.94■■■□□ 2.7
ECHDC1-203ENST00000368291 PMFBP1Q8TBY8 1022 aa31.94■■■□□ 2.7
ECHDC1-203ENST00000368291 SPATA31A6Q5VVP1 1343 aa31.93■■■□□ 2.7
ECHDC1-203ENST00000368291 NUDT16Q96DE0 195 aaKnown RBP31.93■■■□□ 2.7
ECHDC1-203ENST00000368291 COL22A1Q8NFW1 1626 aaPredicted RBP31.9■■■□□ 2.7
ECHDC1-203ENST00000368291 KRT28Q7Z3Y7 464 aa31.89■■■□□ 2.7
ECHDC1-203ENST00000368291 TRPM3Q9HCF6 1732 aaPredicted RBP31.87■■■□□ 2.69
ECHDC1-203ENST00000368291 SBNO2Q9Y2G9 1366 aa31.85■■■□□ 2.69
ECHDC1-203ENST00000368291 CABP2Q9NPB3 220 aa31.84■■■□□ 2.69
ECHDC1-203ENST00000368291 SPATA31A3Q5VYP0 1347 aa31.84■■■□□ 2.69
ECHDC1-203ENST00000368291 SRPK2P78362 688 aaKnown RBP31.83■■■□□ 2.69
ECHDC1-203ENST00000368291 CCDC61Q9Y6R9 512 aa31.83■■■□□ 2.69
ECHDC1-203ENST00000368291 EVC2Q86UK5 1308 aa31.82■■■□□ 2.68
ECHDC1-203ENST00000368291 NUTM2BA6NNL0 878 aaPredicted RBP31.81■■■□□ 2.68
ECHDC1-203ENST00000368291 NUTM2EB1AL46 878 aaPredicted RBP31.81■■■□□ 2.68
ECHDC1-203ENST00000368291 PSME1Q06323 249 aa31.81■■■□□ 2.68
ECHDC1-203ENST00000368291 NUTM2AQ8IVF1 878 aaPredicted RBP31.81■■■□□ 2.68
ECHDC1-203ENST00000368291 RGS17Q9UGC6 210 aaPredicted RBP31.81■■■□□ 2.68
ECHDC1-203ENST00000368291 SBNO1A3KN83 1393 aa31.8■■■□□ 2.68
ECHDC1-203ENST00000368291 TNS3Q68CZ2 1445 aa31.79■■■□□ 2.68
ECHDC1-203ENST00000368291 ALS2Q96Q42 1657 aa31.79■■■□□ 2.68
ECHDC1-203ENST00000368291 POLR3AO14802 1390 aaPredicted RBP31.79■■■□□ 2.68
ECHDC1-203ENST00000368291 PHF23Q9BUL5 403 aaPredicted RBP31.79■■■□□ 2.68
ECHDC1-203ENST00000368291 PLEKHG3A1L390 1219 aa31.78■■■□□ 2.68
ECHDC1-203ENST00000368291 NGDNQ8NEJ9 315 aaKnown RBP31.78■■■□□ 2.68
ECHDC1-203ENST00000368291 PPIP5K1Q6PFW1 1433 aa31.77■■■□□ 2.68
ECHDC1-203ENST00000368291 ACEP12821 1306 aa31.75■■■□□ 2.67
ECHDC1-203ENST00000368291 ST20-MTHFSA0A0A6YYL1 179 aa31.74■■■□□ 2.67
ECHDC1-203ENST00000368291 MARF1Q9Y4F3 1742 aaKnown RBP31.73■■■□□ 2.67
ECHDC1-203ENST00000368291 ILDR2Q71H61 639 aa31.73■■■□□ 2.67
ECHDC1-203ENST00000368291 TESK2Q96S53 571 aa31.73■■■□□ 2.67
ECHDC1-203ENST00000368291 USP47Q96K76 1375 aa31.72■■■□□ 2.67
ECHDC1-203ENST00000368291 ABCA3Q99758 1704 aa31.72■■■□□ 2.67
ECHDC1-203ENST00000368291 MEX3CQ5U5Q3 659 aaKnown RBP31.71■■■□□ 2.67
ECHDC1-203ENST00000368291 CABP1Q9NZU7 370 aa31.69■■■□□ 2.66
ECHDC1-203ENST00000368291 ARHGEF10O15013 1369 aa31.68■■■□□ 2.66
ECHDC1-203ENST00000368291 AKAP12Q02952 1782 aa31.67■■■□□ 2.66
ECHDC1-203ENST00000368291 CRYBG1Q9Y4K1 1723 aa31.66■■■□□ 2.66
ECHDC1-203ENST00000368291 ATAD2Q6PL18 1390 aa31.66■■■□□ 2.66
ECHDC1-203ENST00000368291 ADAMTS2O95450 1211 aa31.66■■■□□ 2.66
ECHDC1-203ENST00000368291 LMOD2Q6P5Q4 547 aa31.65■■■□□ 2.66
ECHDC1-203ENST00000368291 POTEAQ6S8J7 498 aa31.63■■■□□ 2.65
ECHDC1-203ENST00000368291 CABLES1Q8TDN4 633 aa31.63■■■□□ 2.65
ECHDC1-203ENST00000368291 PAK3O75914 559 aaPredicted RBP31.62■■■□□ 2.65
ECHDC1-203ENST00000368291 C8orf37Q96NL8 207 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms