RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 C14orf37Q86TY3 774 aa16.64■□□□□ 0.25
USF1-203ENST00000368021 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
USF1-203ENST00000368021 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
USF1-203ENST00000368021 STK26Q9P289 416 aa16.63■□□□□ 0.25
USF1-203ENST00000368021 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
USF1-203ENST00000368021 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
USF1-203ENST00000368021 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
USF1-203ENST00000368021 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
USF1-203ENST00000368021 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
USF1-203ENST00000368021 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
USF1-203ENST00000368021 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
USF1-203ENST00000368021 TOM1O60784 492 aa16.6■□□□□ 0.25
USF1-203ENST00000368021 NWD1Q149M9 1564 aa16.6■□□□□ 0.25
USF1-203ENST00000368021 NKTRP30414 1462 aaKnown RBP16.6■□□□□ 0.25
USF1-203ENST00000368021 LRPPRCP42704 1394 aaKnown RBP16.59■□□□□ 0.25
USF1-203ENST00000368021 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
USF1-203ENST00000368021 ABCC11Q96J66 1382 aa16.58■□□□□ 0.25
USF1-203ENST00000368021 CCER2I3L3R5 266 aa16.58■□□□□ 0.24
USF1-203ENST00000368021 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
USF1-203ENST00000368021 TECPR2O15040 1411 aa16.56■□□□□ 0.24
USF1-203ENST00000368021 ROBO2Q9HCK4 1378 aa16.56■□□□□ 0.24
USF1-203ENST00000368021 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
USF1-203ENST00000368021 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
USF1-203ENST00000368021 MSH6P52701 1360 aa16.55■□□□□ 0.24
USF1-203ENST00000368021 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
USF1-203ENST00000368021 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
USF1-203ENST00000368021 SIRT1Q96EB6 747 aa16.54■□□□□ 0.24
USF1-203ENST00000368021 C19orf44Q9H6X5 657 aa16.54■□□□□ 0.24
USF1-203ENST00000368021 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
USF1-203ENST00000368021 MYOM1P52179 1685 aa16.53■□□□□ 0.24
USF1-203ENST00000368021 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
USF1-203ENST00000368021 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
USF1-203ENST00000368021 PRAM1Q96QH2 718 aa16.52■□□□□ 0.24
USF1-203ENST00000368021 FAM135BQ49AJ0 1406 aa16.52■□□□□ 0.24
USF1-203ENST00000368021 PER1O15534 1290 aaPredicted RBP16.52■□□□□ 0.23
USF1-203ENST00000368021 ATF3P18847 181 aa16.52■□□□□ 0.23
USF1-203ENST00000368021 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
USF1-203ENST00000368021 POGKQ9P215 609 aa16.51■□□□□ 0.23
USF1-203ENST00000368021 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
USF1-203ENST00000368021 PANK3Q9H999 370 aa16.5■□□□□ 0.23
USF1-203ENST00000368021 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
USF1-203ENST00000368021 PLEKHH1Q9ULM0 1364 aa16.49■□□□□ 0.23
USF1-203ENST00000368021 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
USF1-203ENST00000368021 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
USF1-203ENST00000368021 CADPS2Q86UW7 1296 aa16.48■□□□□ 0.23
USF1-203ENST00000368021 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
USF1-203ENST00000368021 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
USF1-203ENST00000368021 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.46■□□□□ 0.23
USF1-203ENST00000368021 HSPA1LP34931 641 aa16.45■□□□□ 0.22
USF1-203ENST00000368021 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
USF1-203ENST00000368021 RALBP1Q15311 655 aa16.45■□□□□ 0.22
USF1-203ENST00000368021 MINK1Q8N4C8 1332 aaPredicted RBP16.44■□□□□ 0.22
USF1-203ENST00000368021 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
USF1-203ENST00000368021 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
USF1-203ENST00000368021 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
USF1-203ENST00000368021 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
USF1-203ENST00000368021 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
USF1-203ENST00000368021 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
USF1-203ENST00000368021 NALCNQ8IZF0 1738 aa16.43■□□□□ 0.22
USF1-203ENST00000368021 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
USF1-203ENST00000368021 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
USF1-203ENST00000368021 ADGRB2O60241 1585 aa16.4■□□□□ 0.22
USF1-203ENST00000368021 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
USF1-203ENST00000368021 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
USF1-203ENST00000368021 DCCP43146 1447 aa16.39■□□□□ 0.21
USF1-203ENST00000368021 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
USF1-203ENST00000368021 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
USF1-203ENST00000368021 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
USF1-203ENST00000368021 MST1RQ04912 1400 aa16.38■□□□□ 0.21
USF1-203ENST00000368021 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
USF1-203ENST00000368021 WASLO00401 505 aaPredicted RBP16.38■□□□□ 0.21
USF1-203ENST00000368021 BRINP3Q76B58 766 aa16.38■□□□□ 0.21
USF1-203ENST00000368021 ORAI2Q96SN7 254 aa16.38■□□□□ 0.21
USF1-203ENST00000368021 ROBO1Q9Y6N7 1651 aa16.38■□□□□ 0.21
USF1-203ENST00000368021 DDX17Q92841 729 aaKnown RBP16.38■□□□□ 0.21
USF1-203ENST00000368021 ESCO1Q5FWF5 840 aa16.37■□□□□ 0.21
USF1-203ENST00000368021 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
USF1-203ENST00000368021 CARD14Q9BXL6 1004 aa16.37■□□□□ 0.21
USF1-203ENST00000368021 USP32Q8NFA0 1604 aa16.37■□□□□ 0.21
USF1-203ENST00000368021 BRD4O60885 1362 aaPredicted RBP16.35■□□□□ 0.21
USF1-203ENST00000368021 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
USF1-203ENST00000368021 MRS2Q9HD23 443 aa16.35■□□□□ 0.21
USF1-203ENST00000368021 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
USF1-203ENST00000368021 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
USF1-203ENST00000368021 CNGB1Q14028 1251 aaPredicted RBP16.33■□□□□ 0.21
USF1-203ENST00000368021 CCDC184Q52MB2 194 aa16.33■□□□□ 0.21
USF1-203ENST00000368021 NLRP13Q86W25 1043 aa16.33■□□□□ 0.21
USF1-203ENST00000368021 TERF2IPQ9NYB0 399 aa16.33■□□□□ 0.21
USF1-203ENST00000368021 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
USF1-203ENST00000368021 ATP7BP35670 1465 aa16.32■□□□□ 0.2
USF1-203ENST00000368021 CD163L1Q9NR16 1453 aa16.32■□□□□ 0.2
USF1-203ENST00000368021 CDC42BPGQ6DT37 1551 aa16.32■□□□□ 0.2
USF1-203ENST00000368021 CGNL1Q0VF96 1302 aa16.31■□□□□ 0.2
USF1-203ENST00000368021 FOXO3O43524 673 aa16.31■□□□□ 0.2
USF1-203ENST00000368021 NSD2O96028 1365 aa16.31■□□□□ 0.2
USF1-203ENST00000368021 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
USF1-203ENST00000368021 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
USF1-203ENST00000368021 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
USF1-203ENST00000368021 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
USF1-203ENST00000368021 NUDT16Q96DE0 195 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms