RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 HIRIP3Q9BW71 556 aaPredicted RBP28.47■■■□□ 2.15
CD55-203ENST00000367063 MINK1Q8N4C8 1332 aaPredicted RBP28.46■■■□□ 2.15
CD55-203ENST00000367063 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.45■■■□□ 2.15
CD55-203ENST00000367063 XIRP1Q702N8 1843 aaKnown RBP28.44■■■□□ 2.14
CD55-203ENST00000367063 NCOA3Q9Y6Q9 1424 aa28.43■■■□□ 2.14
CD55-203ENST00000367063 NALCNQ8IZF0 1738 aa28.42■■■□□ 2.14
CD55-203ENST00000367063 TESK2Q96S53 571 aa28.42■■■□□ 2.14
CD55-203ENST00000367063 ADGRL3Q9HAR2 1447 aa28.41■■■□□ 2.14
CD55-203ENST00000367063 SBNO2Q9Y2G9 1366 aa28.4■■■□□ 2.14
CD55-203ENST00000367063 C19orf44Q9H6X5 657 aa28.38■■■□□ 2.13
CD55-203ENST00000367063 MSH6P52701 1360 aa28.37■■■□□ 2.13
CD55-203ENST00000367063 ADGRB2O60241 1585 aa28.36■■■□□ 2.13
CD55-203ENST00000367063 SLC24A1O60721 1099 aa28.35■■■□□ 2.13
CD55-203ENST00000367063 TMF1P82094 1093 aa28.34■■■□□ 2.13
CD55-203ENST00000367063 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
CD55-203ENST00000367063 CDC42BPGQ6DT37 1551 aa28.33■■■□□ 2.13
CD55-203ENST00000367063 WASLO00401 505 aaPredicted RBP28.32■■■□□ 2.12
CD55-203ENST00000367063 TULP4Q9NRJ4 1543 aa28.32■■■□□ 2.12
CD55-203ENST00000367063 ATF3P18847 181 aa28.31■■■□□ 2.12
CD55-203ENST00000367063 CDK19Q9BWU1 502 aa28.31■■■□□ 2.12
CD55-203ENST00000367063 DISP3Q9P2K9 1392 aa28.3■■■□□ 2.12
CD55-203ENST00000367063 SRPK2P78362 688 aaKnown RBP28.29■■■□□ 2.12
CD55-203ENST00000367063 DCCP43146 1447 aa28.29■■■□□ 2.12
CD55-203ENST00000367063 CADPS2Q86UW7 1296 aa28.28■■■□□ 2.12
CD55-203ENST00000367063 CERKQ8TCT0 537 aa28.28■■■□□ 2.12
CD55-203ENST00000367063 NUTM2FA1L443 756 aa28.27■■■□□ 2.12
CD55-203ENST00000367063 CABP2Q9NPB3 220 aa28.27■■■□□ 2.12
CD55-203ENST00000367063 FMN2Q9NZ56 1722 aa28.25■■■□□ 2.11
CD55-203ENST00000367063 CDCA8Q53HL2 280 aa28.24■■■□□ 2.11
CD55-203ENST00000367063 IQSEC2Q5JU85 1478 aa28.23■■■□□ 2.11
CD55-203ENST00000367063 C11orf95C9JLR9 678 aaPredicted RBP28.23■■■□□ 2.11
CD55-203ENST00000367063 POLR3GLQ9BT43 218 aa28.21■■■□□ 2.11
CD55-203ENST00000367063 NUDT16Q96DE0 195 aaKnown RBP28.19■■■□□ 2.1
CD55-203ENST00000367063 MST1RQ04912 1400 aa28.19■■■□□ 2.1
CD55-203ENST00000367063 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
CD55-203ENST00000367063 PRR36Q9H6K5 1346 aa28.19■■■□□ 2.1
CD55-203ENST00000367063 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
CD55-203ENST00000367063 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
CD55-203ENST00000367063 RGPD8O14715 1765 aaPredicted RBP28.18■■■□□ 2.1
CD55-203ENST00000367063 ATP7BP35670 1465 aa28.17■■■□□ 2.1
CD55-203ENST00000367063 KIF7Q2M1P5 1343 aa28.17■■■□□ 2.1
CD55-203ENST00000367063 ATAD2Q6PL18 1390 aa28.17■■■□□ 2.1
CD55-203ENST00000367063 SLAIN2Q9P270 581 aa28.16■■■□□ 2.1
CD55-203ENST00000367063 C1orf167Q5SNV9 1468 aa28.16■■■□□ 2.1
CD55-203ENST00000367063 WASHC2AQ641Q2 1341 aa28.14■■■□□ 2.1
CD55-203ENST00000367063 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
CD55-203ENST00000367063 TOM1O60784 492 aa28.14■■■□□ 2.1
CD55-203ENST00000367063 CCDC61Q9Y6R9 512 aa28.14■■■□□ 2.1
CD55-203ENST00000367063 CCDC7Q96M83 1385 aa28.13■■■□□ 2.09
CD55-203ENST00000367063 ESCO1Q5FWF5 840 aa28.13■■■□□ 2.09
CD55-203ENST00000367063 ITSN1Q15811 1721 aa28.12■■■□□ 2.09
CD55-203ENST00000367063 TMC1Q8TDI8 760 aa28.12■■■□□ 2.09
CD55-203ENST00000367063 UBAP1LF5GYI3 381 aa28.11■■■□□ 2.09
CD55-203ENST00000367063 ORAI2Q96SN7 254 aa28.11■■■□□ 2.09
CD55-203ENST00000367063 PPIP5K1Q6PFW1 1433 aa28.11■■■□□ 2.09
CD55-203ENST00000367063 TOPAZ1Q8N9V7 1692 aa28.11■■■□□ 2.09
CD55-203ENST00000367063 CABP1Q9NZU7 370 aa28.1■■■□□ 2.09
CD55-203ENST00000367063 PMFBP1Q8TBY8 1022 aa28.07■■■□□ 2.08
CD55-203ENST00000367063 SLC12A5Q9H2X9 1139 aa28.07■■■□□ 2.08
CD55-203ENST00000367063 PHF8Q9UPP1 1060 aa28.07■■■□□ 2.08
CD55-203ENST00000367063 NINLQ9Y2I6 1382 aa28.06■■■□□ 2.08
CD55-203ENST00000367063 MYOM1P52179 1685 aa28.06■■■□□ 2.08
CD55-203ENST00000367063 PIP4K2BP78356 416 aa28.04■■■□□ 2.08
CD55-203ENST00000367063 BRINP3Q76B58 766 aa28.04■■■□□ 2.08
CD55-203ENST00000367063 PLEKHG3A1L390 1219 aa28.03■■■□□ 2.08
CD55-203ENST00000367063 KIF1AQ12756 1690 aa28.03■■■□□ 2.08
CD55-203ENST00000367063 SCAF1Q9H7N4 1312 aaKnown RBP28.02■■■□□ 2.08
CD55-203ENST00000367063 NGDNQ8NEJ9 315 aaKnown RBP28.02■■■□□ 2.08
CD55-203ENST00000367063 ROBO1Q9Y6N7 1651 aa28.01■■■□□ 2.07
CD55-203ENST00000367063 ACEP12821 1306 aa28■■■□□ 2.07
CD55-203ENST00000367063 FOXO3O43524 673 aa27.99■■■□□ 2.07
CD55-203ENST00000367063 TERF2IPQ9NYB0 399 aa27.98■■■□□ 2.07
CD55-203ENST00000367063 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
CD55-203ENST00000367063 HDGFL2Q7Z4V5 671 aaPredicted RBP27.97■■■□□ 2.07
CD55-203ENST00000367063 CD163L1Q9NR16 1453 aa27.96■■■□□ 2.07
CD55-203ENST00000367063 ANKRD36BQ8N2N9 1353 aa27.96■■■□□ 2.07
CD55-203ENST00000367063 A0A1W2PP64 1363 aa27.95■■■□□ 2.07
CD55-203ENST00000367063 DDX17Q92841 729 aaKnown RBP27.95■■■□□ 2.07
CD55-203ENST00000367063 CPSF1Q10570 1443 aaKnown RBP27.94■■■□□ 2.06
CD55-203ENST00000367063 PSME1Q06323 249 aa27.94■■■□□ 2.06
CD55-203ENST00000367063 AKAP12Q02952 1782 aa27.94■■■□□ 2.06
CD55-203ENST00000367063 NPHP3Q7Z494 1330 aa27.94■■■□□ 2.06
CD55-203ENST00000367063 ZNF692Q9BU19 519 aaPredicted RBP27.94■■■□□ 2.06
CD55-203ENST00000367063 PANK3Q9H999 370 aa27.94■■■□□ 2.06
CD55-203ENST00000367063 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
CD55-203ENST00000367063 XPCQ01831 940 aaPredicted RBP27.91■■■□□ 2.06
CD55-203ENST00000367063 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
CD55-203ENST00000367063 NHSL1Q5SYE7 1610 aa27.9■■■□□ 2.06
CD55-203ENST00000367063 KRT28Q7Z3Y7 464 aa27.89■■■□□ 2.06
CD55-203ENST00000367063 USP6P35125 1406 aa27.89■■■□□ 2.06
CD55-203ENST00000367063 MON2Q7Z3U7 1717 aa27.89■■■□□ 2.06
CD55-203ENST00000367063 CARD14Q9BXL6 1004 aa27.87■■■□□ 2.05
CD55-203ENST00000367063 AHDC1Q5TGY3 1603 aaPredicted RBP27.86■■■□□ 2.05
CD55-203ENST00000367063 PXDNQ92626 1479 aa27.85■■■□□ 2.05
CD55-203ENST00000367063 PAK3O75914 559 aaPredicted RBP27.84■■■□□ 2.05
CD55-203ENST00000367063 NSD3Q9BZ95 1437 aa27.84■■■□□ 2.05
CD55-203ENST00000367063 EDC4Q6P2E9 1401 aaKnown RBP27.84■■■□□ 2.05
CD55-203ENST00000367063 SOS2Q07890 1332 aaPredicted RBP27.83■■■□□ 2.05
CD55-203ENST00000367063 NRKQ7Z2Y5 1582 aa27.83■■■□□ 2.05
CD55-203ENST00000367063 PHLPP1O60346 1717 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms