RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 SIRT1Q96EB6 747 aa24.68■■□□□ 1.54
PRKN-202ENST00000366892 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
PRKN-202ENST00000366892 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
PRKN-202ENST00000366892 SPATA31A6Q5VVP1 1343 aa24.67■■□□□ 1.54
PRKN-202ENST00000366892 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
PRKN-202ENST00000366892 STAC3Q96MF2 364 aa24.66■■□□□ 1.54
PRKN-202ENST00000366892 NHSL1Q5SYE7 1610 aa24.62■■□□□ 1.53
PRKN-202ENST00000366892 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
PRKN-202ENST00000366892 ESCO1Q5FWF5 840 aa24.61■■□□□ 1.53
PRKN-202ENST00000366892 CDC42BPGQ6DT37 1551 aa24.6■■□□□ 1.53
PRKN-202ENST00000366892 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
PRKN-202ENST00000366892 LAMC1P11047 1609 aa24.59■■□□□ 1.53
PRKN-202ENST00000366892 POTEAQ6S8J7 498 aa24.59■■□□□ 1.53
PRKN-202ENST00000366892 PRAM1Q96QH2 718 aa24.59■■□□□ 1.53
PRKN-202ENST00000366892 LRP6O75581 1613 aa24.59■■□□□ 1.53
PRKN-202ENST00000366892 SOS2Q07890 1332 aaPredicted RBP24.59■■□□□ 1.53
PRKN-202ENST00000366892 SHPRHQ149N8 1683 aa24.58■■□□□ 1.53
PRKN-202ENST00000366892 NUTM2BA6NNL0 878 aaPredicted RBP24.56■■□□□ 1.52
PRKN-202ENST00000366892 NUTM2EB1AL46 878 aaPredicted RBP24.56■■□□□ 1.52
PRKN-202ENST00000366892 MEX3CQ5U5Q3 659 aaKnown RBP24.56■■□□□ 1.52
PRKN-202ENST00000366892 NUTM2AQ8IVF1 878 aaPredicted RBP24.56■■□□□ 1.52
PRKN-202ENST00000366892 SAFB2Q14151 953 aaKnown RBP eCLIP24.56■■□□□ 1.52
PRKN-202ENST00000366892 TRAK1Q9UPV9 953 aa24.56■■□□□ 1.52
PRKN-202ENST00000366892 ADGRB1O14514 1584 aa24.55■■□□□ 1.52
PRKN-202ENST00000366892 POGKQ9P215 609 aa24.55■■□□□ 1.52
PRKN-202ENST00000366892 FOXO3O43524 673 aa24.53■■□□□ 1.52
PRKN-202ENST00000366892 PNPLA6Q8IY17 1366 aa24.53■■□□□ 1.52
PRKN-202ENST00000366892 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
PRKN-202ENST00000366892 NPHP3Q7Z494 1330 aa24.51■■□□□ 1.51
PRKN-202ENST00000366892 XPCQ01831 940 aaPredicted RBP24.47■■□□□ 1.51
PRKN-202ENST00000366892 ZNF772Q68DY9 489 aaPredicted RBP24.47■■□□□ 1.51
PRKN-202ENST00000366892 FMN2Q9NZ56 1722 aa24.46■■□□□ 1.51
PRKN-202ENST00000366892 SIN3AQ96ST3 1273 aa24.45■■□□□ 1.51
PRKN-202ENST00000366892 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.5
PRKN-202ENST00000366892 ZEB1P37275 1124 aaPredicted RBP24.44■■□□□ 1.5
PRKN-202ENST00000366892 PXDNQ92626 1479 aa24.43■■□□□ 1.5
PRKN-202ENST00000366892 PHF8Q9UPP1 1060 aa24.43■■□□□ 1.5
PRKN-202ENST00000366892 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
PRKN-202ENST00000366892 ADAMTS2O95450 1211 aa24.41■■□□□ 1.5
PRKN-202ENST00000366892 NBPF1Q3BBV0 1214 aa24.41■■□□□ 1.5
PRKN-202ENST00000366892 L3MBTL2Q969R5 705 aa24.41■■□□□ 1.5
PRKN-202ENST00000366892 C8orf37Q96NL8 207 aa24.41■■□□□ 1.5
PRKN-202ENST00000366892 KRT28Q7Z3Y7 464 aa24.4■■□□□ 1.5
PRKN-202ENST00000366892 AFF2P51816 1311 aa24.4■■□□□ 1.5
PRKN-202ENST00000366892 WASLO00401 505 aaPredicted RBP24.39■■□□□ 1.49
PRKN-202ENST00000366892 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
PRKN-202ENST00000366892 NGLY1Q96IV0 654 aa24.37■■□□□ 1.49
PRKN-202ENST00000366892 ADGRB2O60241 1585 aa24.37■■□□□ 1.49
PRKN-202ENST00000366892 ANKARQ7Z5J8 1434 aa24.36■■□□□ 1.49
PRKN-202ENST00000366892 PMFBP1Q8TBY8 1022 aa24.36■■□□□ 1.49
PRKN-202ENST00000366892 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
PRKN-202ENST00000366892 RGPD8O14715 1765 aaPredicted RBP24.36■■□□□ 1.49
PRKN-202ENST00000366892 KIF1AQ12756 1690 aa24.35■■□□□ 1.49
PRKN-202ENST00000366892 PSME1Q06323 249 aa24.35■■□□□ 1.49
PRKN-202ENST00000366892 PRR36Q9H6K5 1346 aa24.34■■□□□ 1.49
PRKN-202ENST00000366892 COL22A1Q8NFW1 1626 aaPredicted RBP24.33■■□□□ 1.49
PRKN-202ENST00000366892 RXRBP28702 533 aa24.33■■□□□ 1.49
PRKN-202ENST00000366892 KIAA1210Q9ULL0 1709 aa24.33■■□□□ 1.49
PRKN-202ENST00000366892 EIF3AQ14152 1382 aaKnown RBP24.32■■□□□ 1.48
PRKN-202ENST00000366892 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
PRKN-202ENST00000366892 QTRT2Q9H974 415 aaKnown RBP24.31■■□□□ 1.48
PRKN-202ENST00000366892 ARHGEF28Q8N1W1 1705 aaKnown RBP24.3■■□□□ 1.48
PRKN-202ENST00000366892 FNBP4Q8N3X1 1017 aaPredicted RBP24.3■■□□□ 1.48
PRKN-202ENST00000366892 CDK19Q9BWU1 502 aa24.29■■□□□ 1.48
PRKN-202ENST00000366892 TULP4Q9NRJ4 1543 aa24.28■■□□□ 1.48
PRKN-202ENST00000366892 USP21Q9UK80 565 aa24.28■■□□□ 1.48
PRKN-202ENST00000366892 SBNO1A3KN83 1393 aa24.27■■□□□ 1.48
PRKN-202ENST00000366892 NUDT16Q96DE0 195 aaKnown RBP24.27■■□□□ 1.48
PRKN-202ENST00000366892 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
PRKN-202ENST00000366892 LMOD2Q6P5Q4 547 aa24.25■■□□□ 1.47
PRKN-202ENST00000366892 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
PRKN-202ENST00000366892 NGDNQ8NEJ9 315 aaKnown RBP24.25■■□□□ 1.47
PRKN-202ENST00000366892 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
PRKN-202ENST00000366892 GPRASP1Q5JY77 1395 aa24.23■■□□□ 1.47
PRKN-202ENST00000366892 CENPJQ9HC77 1338 aaPredicted RBP24.22■■□□□ 1.47
PRKN-202ENST00000366892 PLEKHG5O94827 1062 aa24.21■■□□□ 1.47
PRKN-202ENST00000366892 TRPC5Q9UL62 973 aaPredicted RBP24.21■■□□□ 1.47
PRKN-202ENST00000366892 ARHGEF10O15013 1369 aa24.21■■□□□ 1.47
PRKN-202ENST00000366892 ATP7BP35670 1465 aa24.21■■□□□ 1.47
PRKN-202ENST00000366892 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.47
PRKN-202ENST00000366892 CDK12Q9NYV4 1490 aaPredicted RBP24.2■■□□□ 1.46
PRKN-202ENST00000366892 NBPF8Q3BBV2 869 aa24.2■■□□□ 1.46
PRKN-202ENST00000366892 HAP1P54257 671 aaPredicted RBP24.19■■□□□ 1.46
PRKN-202ENST00000366892 BCL9LQ86UU0 1499 aa24.18■■□□□ 1.46
PRKN-202ENST00000366892 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
PRKN-202ENST00000366892 PLEKHG3A1L390 1219 aa24.15■■□□□ 1.46
PRKN-202ENST00000366892 PAK3O75914 559 aaPredicted RBP24.15■■□□□ 1.46
PRKN-202ENST00000366892 SRPK2P78362 688 aaKnown RBP24.15■■□□□ 1.46
PRKN-202ENST00000366892 TRPM1Q7Z4N2 1603 aa24.15■■□□□ 1.46
PRKN-202ENST00000366892 ATRNO75882 1429 aa24.15■■□□□ 1.46
PRKN-202ENST00000366892 CABP2Q9NPB3 220 aa24.15■■□□□ 1.46
PRKN-202ENST00000366892 MARF1Q9Y4F3 1742 aaKnown RBP24.14■■□□□ 1.45
PRKN-202ENST00000366892 ACEP12821 1306 aa24.14■■□□□ 1.45
PRKN-202ENST00000366892 TRPM3Q9HCF6 1732 aaPredicted RBP24.13■■□□□ 1.45
PRKN-202ENST00000366892 UNC5CLQ8IV45 518 aa24.13■■□□□ 1.45
PRKN-202ENST00000366892 TONSLQ96HA7 1378 aa24.13■■□□□ 1.45
PRKN-202ENST00000366892 RGS12O14924 1447 aa24.12■■□□□ 1.45
PRKN-202ENST00000366892 SLIT2O94813 1529 aa24.12■■□□□ 1.45
PRKN-202ENST00000366892 POLR3AO14802 1390 aaPredicted RBP24.12■■□□□ 1.45
PRKN-202ENST00000366892 ITSN1Q15811 1721 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms