RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 NRG2O14511 850 aaPredicted RBP14.24□□□□□ -0.13
H3F3A-201ENST00000366813 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
H3F3A-201ENST00000366813 KRI1Q8N9T8 703 aaKnown RBP14.24□□□□□ -0.13
H3F3A-201ENST00000366813 FMNL1O95466 1100 aaPredicted RBP14.23□□□□□ -0.13
H3F3A-201ENST00000366813 SLC27A5Q9Y2P5 690 aa14.23□□□□□ -0.13
H3F3A-201ENST00000366813 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
H3F3A-201ENST00000366813 CCDC102AQ96A19 550 aa14.22□□□□□ -0.13
H3F3A-201ENST00000366813 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
H3F3A-201ENST00000366813 ZNF608Q9ULD9 1512 aaPredicted RBP14.21□□□□□ -0.14
H3F3A-201ENST00000366813 CD46P15529 392 aa14.19□□□□□ -0.14
H3F3A-201ENST00000366813 SPRYD7Q5W111 196 aa14.19□□□□□ -0.14
H3F3A-201ENST00000366813 MROH2BQ7Z745 1585 aa14.19□□□□□ -0.14
H3F3A-201ENST00000366813 TRAF7Q6Q0C0 670 aa14.18□□□□□ -0.14
H3F3A-201ENST00000366813 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
H3F3A-201ENST00000366813 LIAT1Q6ZQX7 453 aa14.17□□□□□ -0.14
H3F3A-201ENST00000366813 TPRNQ4KMQ1 711 aa14.16□□□□□ -0.14
H3F3A-201ENST00000366813 ZNF598Q86UK7 904 aaKnown RBP14.16□□□□□ -0.14
H3F3A-201ENST00000366813 THAP11Q96EK4 314 aa14.16□□□□□ -0.14
H3F3A-201ENST00000366813 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
H3F3A-201ENST00000366813 KDM4AO75164 1064 aa14.15□□□□□ -0.14
H3F3A-201ENST00000366813 CLCN1P35523 988 aa14.15□□□□□ -0.14
H3F3A-201ENST00000366813 EMID1Q96A84 441 aaPredicted RBP14.15□□□□□ -0.14
H3F3A-201ENST00000366813 GPCPD1Q9NPB8 672 aa14.15□□□□□ -0.15
H3F3A-201ENST00000366813 Q3C1V9 767 aa14.14□□□□□ -0.15
H3F3A-201ENST00000366813 BRICD5Q6PL45 260 aa14.14□□□□□ -0.15
H3F3A-201ENST00000366813 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
H3F3A-201ENST00000366813 FAM160A2Q8N612 972 aaPredicted RBP14.13□□□□□ -0.15
H3F3A-201ENST00000366813 USP46P62068 366 aa14.11□□□□□ -0.15
H3F3A-201ENST00000366813 PLA2G2CQ5R387 149 aa14.11□□□□□ -0.15
H3F3A-201ENST00000366813 RSF1Q96T23 1441 aaPredicted RBP14.1□□□□□ -0.15
H3F3A-201ENST00000366813 FCF1Q9Y324 198 aaKnown RBP14.1□□□□□ -0.15
H3F3A-201ENST00000366813 RNF19BQ6ZMZ0 732 aa14.09□□□□□ -0.15
H3F3A-201ENST00000366813 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
H3F3A-201ENST00000366813 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
H3F3A-201ENST00000366813 FAM217BQ9NTX9 383 aaPredicted RBP14.08□□□□□ -0.16
H3F3A-201ENST00000366813 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
H3F3A-201ENST00000366813 CD2BP2O95400 341 aaKnown RBP14.07□□□□□ -0.16
H3F3A-201ENST00000366813 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
H3F3A-201ENST00000366813 CFTRP13569 1480 aa14.07□□□□□ -0.16
H3F3A-201ENST00000366813 ZMYND10O75800 440 aa14.06□□□□□ -0.16
H3F3A-201ENST00000366813 TRIM67Q6ZTA4 783 aa14.06□□□□□ -0.16
H3F3A-201ENST00000366813 ZBTB24O43167 697 aaPredicted RBP14.05□□□□□ -0.16
H3F3A-201ENST00000366813 RPIAP49247 311 aa14.05□□□□□ -0.16
H3F3A-201ENST00000366813 MSS51Q4VC12 460 aa14.05□□□□□ -0.16
H3F3A-201ENST00000366813 PRDM9Q9NQV7 894 aa14.05□□□□□ -0.16
H3F3A-201ENST00000366813 TNFRSF10AO00220 468 aa14.04□□□□□ -0.16
H3F3A-201ENST00000366813 PKDCCQ504Y2 493 aa14.04□□□□□ -0.16
H3F3A-201ENST00000366813 CHD1O14646 1710 aa14.03□□□□□ -0.16
H3F3A-201ENST00000366813 PRR20EP86478 221 aa14.03□□□□□ -0.16
H3F3A-201ENST00000366813 PRR20CP86479 221 aa14.03□□□□□ -0.16
H3F3A-201ENST00000366813 PRR20DP86480 221 aa14.03□□□□□ -0.16
H3F3A-201ENST00000366813 PRR20BP86481 221 aa14.03□□□□□ -0.16
H3F3A-201ENST00000366813 PRR20AP86496 221 aa14.03□□□□□ -0.16
H3F3A-201ENST00000366813 TTLL12Q14166 644 aaPredicted RBP14.03□□□□□ -0.16
H3F3A-201ENST00000366813 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
H3F3A-201ENST00000366813 SSTR3P32745 418 aaPredicted RBP14.02□□□□□ -0.17
H3F3A-201ENST00000366813 FOXC1Q12948 553 aa14.02□□□□□ -0.17
H3F3A-201ENST00000366813 LCE2BO14633 110 aa14.01□□□□□ -0.17
H3F3A-201ENST00000366813 HOXA2O43364 376 aa14.01□□□□□ -0.17
H3F3A-201ENST00000366813 HLA-CQ95604 372 aa14.01□□□□□ -0.17
H3F3A-201ENST00000366813 GDF9O60383 454 aa14□□□□□ -0.17
H3F3A-201ENST00000366813 DGAT1O75907 488 aa13.99□□□□□ -0.17
H3F3A-201ENST00000366813 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
H3F3A-201ENST00000366813 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
H3F3A-201ENST00000366813 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.174e-10■■■■■ 29
H3F3A-201ENST00000366813 GUCA2AQ02747 115 aa13.97□□□□□ -0.17
H3F3A-201ENST00000366813 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
H3F3A-201ENST00000366813 MMP16P51512 607 aa13.95□□□□□ -0.18
H3F3A-201ENST00000366813 WIZO95785 1651 aa13.95□□□□□ -0.18
H3F3A-201ENST00000366813 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
H3F3A-201ENST00000366813 AMHR2Q16671 573 aa13.93□□□□□ -0.18
H3F3A-201ENST00000366813 PKD2L1Q9P0L9 805 aa13.93□□□□□ -0.18
H3F3A-201ENST00000366813 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
H3F3A-201ENST00000366813 FDX1P10109 184 aa13.91□□□□□ -0.18
H3F3A-201ENST00000366813 ZNF787Q6DD87 383 aa13.91□□□□□ -0.18
H3F3A-201ENST00000366813 DXOO77932 396 aaKnown RBP13.9□□□□□ -0.18
H3F3A-201ENST00000366813 CYP4X1Q8N118 509 aa13.9□□□□□ -0.18
H3F3A-201ENST00000366813 C6orf229H3BNL8 230 aa13.9□□□□□ -0.19
H3F3A-201ENST00000366813 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.19
H3F3A-201ENST00000366813 SPIRE2Q8WWL2 714 aa13.9□□□□□ -0.19
H3F3A-201ENST00000366813 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
H3F3A-201ENST00000366813 MYT1Q01538 1121 aa13.89□□□□□ -0.19
H3F3A-201ENST00000366813 AK7Q96M32 723 aa13.89□□□□□ -0.19
H3F3A-201ENST00000366813 RETREG3Q86VR2 466 aa13.88□□□□□ -0.19
H3F3A-201ENST00000366813 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
H3F3A-201ENST00000366813 BEGAINQ9BUH8 593 aa13.87□□□□□ -0.19
H3F3A-201ENST00000366813 TRIM66O15016 1216 aa13.86□□□□□ -0.19
H3F3A-201ENST00000366813 JUNDP17535 347 aa13.86□□□□□ -0.19
H3F3A-201ENST00000366813 NDUFV2P19404 249 aa13.86□□□□□ -0.19
H3F3A-201ENST00000366813 TRIM32Q13049 653 aa13.86□□□□□ -0.19
H3F3A-201ENST00000366813 TTC24A2A3L6 582 aaPredicted RBP13.85□□□□□ -0.19
H3F3A-201ENST00000366813 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
H3F3A-201ENST00000366813 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
H3F3A-201ENST00000366813 MOXD2PA6NHM9 499 aa13.83□□□□□ -0.2
H3F3A-201ENST00000366813 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.2
H3F3A-201ENST00000366813 TOR4AQ9NXH8 423 aa13.82□□□□□ -0.2
H3F3A-201ENST00000366813 DIXDC1Q155Q3 683 aa13.81□□□□□ -0.2
H3F3A-201ENST00000366813 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
H3F3A-201ENST00000366813 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
H3F3A-201ENST00000366813 WNT7AO00755 349 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms