RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 NUTM2DQ5VT03 806 aaPredicted RBP22.88■■□□□ 1.25
TRIM11-202ENST00000366699 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.87■■□□□ 1.25
TRIM11-202ENST00000366699 SLFN5Q08AF3 891 aa22.86■■□□□ 1.25
TRIM11-202ENST00000366699 CCDC146Q8IYE0 955 aa22.86■■□□□ 1.25
TRIM11-202ENST00000366699 APAF1O14727 1248 aa22.85■■□□□ 1.25
TRIM11-202ENST00000366699 USP32Q8NFA0 1604 aa22.84■■□□□ 1.25
TRIM11-202ENST00000366699 NSD2O96028 1365 aa22.84■■□□□ 1.25
TRIM11-202ENST00000366699 ANKRD36BQ8N2N9 1353 aa22.84■■□□□ 1.25
TRIM11-202ENST00000366699 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
TRIM11-202ENST00000366699 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.25
TRIM11-202ENST00000366699 E9PSI1 815 aa22.82■■□□□ 1.24
TRIM11-202ENST00000366699 DIP2BQ9P265 1576 aa22.82■■□□□ 1.24
TRIM11-202ENST00000366699 TSPOAP1O95153 1857 aa22.82■■□□□ 1.24
TRIM11-202ENST00000366699 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
TRIM11-202ENST00000366699 PDE4AP27815 886 aa22.82■■□□□ 1.24
TRIM11-202ENST00000366699 TRMT2AQ8IZ69 625 aaKnown RBP22.82■■□□□ 1.24
TRIM11-202ENST00000366699 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
TRIM11-202ENST00000366699 REREQ9P2R6 1566 aa22.81■■□□□ 1.24
TRIM11-202ENST00000366699 TMEM131LA2VDJ0 1609 aa22.8■■□□□ 1.24
TRIM11-202ENST00000366699 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
TRIM11-202ENST00000366699 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
TRIM11-202ENST00000366699 BACH2Q9BYV9 841 aa22.8■■□□□ 1.24
TRIM11-202ENST00000366699 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
TRIM11-202ENST00000366699 C20orf194Q5TEA3 1177 aa22.79■■□□□ 1.24
TRIM11-202ENST00000366699 AGLP35573 1532 aa22.79■■□□□ 1.24
TRIM11-202ENST00000366699 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
TRIM11-202ENST00000366699 NKTRP30414 1462 aaKnown RBP22.78■■□□□ 1.24
TRIM11-202ENST00000366699 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
TRIM11-202ENST00000366699 STK26Q9P289 416 aa22.76■■□□□ 1.23
TRIM11-202ENST00000366699 TNNT2P45379 298 aaPredicted RBP22.76■■□□□ 1.23
TRIM11-202ENST00000366699 FBXO31Q5XUX0 539 aaPredicted RBP22.75■■□□□ 1.23
TRIM11-202ENST00000366699 ATAD2Q6PL18 1390 aa22.75■■□□□ 1.23
TRIM11-202ENST00000366699 SRPK2P78362 688 aaKnown RBP22.75■■□□□ 1.23
TRIM11-202ENST00000366699 RUNDC1Q96C34 613 aa22.75■■□□□ 1.23
TRIM11-202ENST00000366699 POGKQ9P215 609 aa22.74■■□□□ 1.23
TRIM11-202ENST00000366699 CENPQQ7L2Z9 268 aaPredicted RBP22.74■■□□□ 1.23
TRIM11-202ENST00000366699 KDM2BQ8NHM5 1336 aa22.74■■□□□ 1.23
TRIM11-202ENST00000366699 YTHDC2Q9H6S0 1430 aaKnown RBP22.73■■□□□ 1.23
TRIM11-202ENST00000366699 SAFB2Q14151 953 aaKnown RBP eCLIP22.73■■□□□ 1.23
TRIM11-202ENST00000366699 MTHFSP49914 203 aa22.73■■□□□ 1.23
TRIM11-202ENST00000366699 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
TRIM11-202ENST00000366699 PTPRMP28827 1452 aa22.71■■□□□ 1.23
TRIM11-202ENST00000366699 WWC1Q8IX03 1113 aa22.71■■□□□ 1.23
TRIM11-202ENST00000366699 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
TRIM11-202ENST00000366699 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
TRIM11-202ENST00000366699 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
TRIM11-202ENST00000366699 ABCC11Q96J66 1382 aa22.69■■□□□ 1.22
TRIM11-202ENST00000366699 SHPRHQ149N8 1683 aa22.69■■□□□ 1.22
TRIM11-202ENST00000366699 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
TRIM11-202ENST00000366699 A0A1W2PP64 1363 aa22.67■■□□□ 1.22
TRIM11-202ENST00000366699 MYO5BQ9ULV0 1848 aa22.67■■□□□ 1.22
TRIM11-202ENST00000366699 ALKQ9UM73 1620 aa22.67■■□□□ 1.22
TRIM11-202ENST00000366699 MINK1Q8N4C8 1332 aaPredicted RBP22.66■■□□□ 1.22
TRIM11-202ENST00000366699 CCDC27Q2M243 656 aa22.65■■□□□ 1.22
TRIM11-202ENST00000366699 WDR63Q8IWG1 891 aa22.65■■□□□ 1.22
TRIM11-202ENST00000366699 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
TRIM11-202ENST00000366699 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.22
TRIM11-202ENST00000366699 SPATA31D1Q6ZQQ2 1576 aa22.64■■□□□ 1.22
TRIM11-202ENST00000366699 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
TRIM11-202ENST00000366699 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
TRIM11-202ENST00000366699 A2ML1A8K2U0 1454 aa22.62■■□□□ 1.21
TRIM11-202ENST00000366699 NBR1Q14596 966 aa22.62■■□□□ 1.21
TRIM11-202ENST00000366699 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
TRIM11-202ENST00000366699 MED14O60244 1454 aa22.62■■□□□ 1.21
TRIM11-202ENST00000366699 BCAR3O75815 825 aa22.62■■□□□ 1.21
TRIM11-202ENST00000366699 ESF1Q9H501 851 aaKnown RBP22.62■■□□□ 1.21
TRIM11-202ENST00000366699 CLTCQ00610 1675 aaKnown RBP22.62■■□□□ 1.21
TRIM11-202ENST00000366699 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
TRIM11-202ENST00000366699 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
TRIM11-202ENST00000366699 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
TRIM11-202ENST00000366699 CDK19Q9BWU1 502 aa22.61■■□□□ 1.21
TRIM11-202ENST00000366699 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
TRIM11-202ENST00000366699 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
TRIM11-202ENST00000366699 SKAP1Q86WV1 359 aa22.6■■□□□ 1.21
TRIM11-202ENST00000366699 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
TRIM11-202ENST00000366699 DLC1Q96QB1 1528 aa22.6■■□□□ 1.21
TRIM11-202ENST00000366699 PDE3AQ14432 1141 aa22.6■■□□□ 1.21
TRIM11-202ENST00000366699 MLECQ14165 292 aa22.58■■□□□ 1.21
TRIM11-202ENST00000366699 ARHGEF40Q8TER5 1519 aa22.58■■□□□ 1.2
TRIM11-202ENST00000366699 KIF13AQ9H1H9 1805 aa22.58■■□□□ 1.2
TRIM11-202ENST00000366699 GGNBP2Q9H3C7 697 aa22.58■■□□□ 1.2
TRIM11-202ENST00000366699 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.2
TRIM11-202ENST00000366699 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
TRIM11-202ENST00000366699 HDGFP51858 240 aaKnown RBP22.57■■□□□ 1.2
TRIM11-202ENST00000366699 DDRGK1Q96HY6 314 aa22.57■■□□□ 1.2
TRIM11-202ENST00000366699 MYH16Q9H6N6 1097 aa22.57■■□□□ 1.2
TRIM11-202ENST00000366699 FYB1O15117 783 aa22.57■■□□□ 1.2
TRIM11-202ENST00000366699 CD163L1Q9NR16 1453 aa22.55■■□□□ 1.2
TRIM11-202ENST00000366699 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
TRIM11-202ENST00000366699 RTL5Q5HYW3 569 aaPredicted RBP22.54■■□□□ 1.2
TRIM11-202ENST00000366699 PNNQ9H307 717 aaKnown RBP22.54■■□□□ 1.2
TRIM11-202ENST00000366699 CABP1Q9NZU7 370 aa22.54■■□□□ 1.2
TRIM11-202ENST00000366699 DEKP35659 375 aaKnown RBP22.53■■□□□ 1.2
TRIM11-202ENST00000366699 ZMYM3Q14202 1370 aa22.52■■□□□ 1.2
TRIM11-202ENST00000366699 AAMPQ13685 434 aa22.52■■□□□ 1.19
TRIM11-202ENST00000366699 U2SURPO15042 1029 aaKnown RBP22.51■■□□□ 1.19
TRIM11-202ENST00000366699 NLRP1Q9C000 1473 aa22.51■■□□□ 1.19
TRIM11-202ENST00000366699 RARSP54136 660 aaKnown RBP22.5■■□□□ 1.19
TRIM11-202ENST00000366699 MAPK8IP3Q9UPT6 1336 aa22.5■■□□□ 1.19
TRIM11-202ENST00000366699 ATP7BP35670 1465 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms