RNA–Protein interactions for RNA: ENST00000366525.8

HNRNPU-202, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,851 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-202ENST00000366525 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
HNRNPU-202ENST00000366525 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-202ENST00000366525 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
HNRNPU-202ENST00000366525 SSFA2P28290 1259 aa12.26□□□□□ -0.45
HNRNPU-202ENST00000366525 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-202ENST00000366525 PDS5BQ9NTI5 1447 aa12.26□□□□□ -0.45
HNRNPU-202ENST00000366525 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 PTMSP20962 102 aa12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 RBM25P49756 843 aaKnown RBP12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 NGEFQ8N5V2 710 aa12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 SYNMO15061 1565 aa12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 HNRNPMP52272 730 aaKnown RBP eCLIP12.25□□□□□ -0.452e-17■■□□□ 11.8
HNRNPU-202ENST00000366525 CCDC141Q6ZP82 1450 aa12.25□□□□□ -0.45
HNRNPU-202ENST00000366525 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
HNRNPU-202ENST00000366525 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
HNRNPU-202ENST00000366525 ZNF500O60304 480 aaPredicted RBP12.24□□□□□ -0.45
HNRNPU-202ENST00000366525 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
HNRNPU-202ENST00000366525 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
HNRNPU-202ENST00000366525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.451e-14■■□□□ 13.9
HNRNPU-202ENST00000366525 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
HNRNPU-202ENST00000366525 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
HNRNPU-202ENST00000366525 TARBP1Q13395 1621 aaKnown RBP12.23□□□□□ -0.45
HNRNPU-202ENST00000366525 NUP160Q12769 1436 aa12.23□□□□□ -0.45
HNRNPU-202ENST00000366525 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
HNRNPU-202ENST00000366525 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 DYNC1I1O14576 645 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 FGD1P98174 961 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 HS1BP3Q53T59 392 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 KIF2CQ99661 725 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 PLB1Q6P1J6 1458 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 MYOM1P52179 1685 aa12.22□□□□□ -0.45
HNRNPU-202ENST00000366525 BAG4O95429 457 aaKnown RBP12.21□□□□□ -0.45
HNRNPU-202ENST00000366525 FTSJ3Q8IY81 847 aaKnown RBP12.21□□□□□ -0.45
HNRNPU-202ENST00000366525 RBSNQ9H1K0 784 aa12.21□□□□□ -0.45
HNRNPU-202ENST00000366525 CDCA8Q53HL2 280 aa12.21□□□□□ -0.45
HNRNPU-202ENST00000366525 MTERF4Q7Z6M4 381 aaKnown RBP12.21□□□□□ -0.45
HNRNPU-202ENST00000366525 SYNJ2O15056 1496 aa12.21□□□□□ -0.46
HNRNPU-202ENST00000366525 NCLP19338 710 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 ZNF445P59923 1031 aa12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 DZIP1LQ8IYY4 767 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 PDLIM2Q96JY6 352 aa12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 K7ELQ4 463 aaPredicted RBP12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 TCP11L2Q8N4U5 519 aa12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
HNRNPU-202ENST00000366525 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
HNRNPU-202ENST00000366525 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
HNRNPU-202ENST00000366525 ZSCAN23Q3MJ62 389 aa12.19□□□□□ -0.46
HNRNPU-202ENST00000366525 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
HNRNPU-202ENST00000366525 DMTNQ08495 405 aa12.19□□□□□ -0.46
HNRNPU-202ENST00000366525 IQGAP1P46940 1657 aa12.19□□□□□ -0.46
HNRNPU-202ENST00000366525 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
HNRNPU-202ENST00000366525 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
HNRNPU-202ENST00000366525 SASS6Q6UVJ0 657 aa12.18□□□□□ -0.46
HNRNPU-202ENST00000366525 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 CLEC17AQ6ZS10 378 aa12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 CCDC94Q9BW85 323 aaPredicted RBP12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 CARD14Q9BXL6 1004 aa12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 ZSCAN20P17040 1043 aaPredicted RBP12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
HNRNPU-202ENST00000366525 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
HNRNPU-202ENST00000366525 WDR63Q8IWG1 891 aa12.16□□□□□ -0.46
HNRNPU-202ENST00000366525 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
HNRNPU-202ENST00000366525 PHF23Q9BUL5 403 aaPredicted RBP12.16□□□□□ -0.46
HNRNPU-202ENST00000366525 POLR3AO14802 1390 aaPredicted RBP12.16□□□□□ -0.46
HNRNPU-202ENST00000366525 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
HNRNPU-202ENST00000366525 TRIM27P14373 513 aa12.15□□□□□ -0.46
HNRNPU-202ENST00000366525 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
HNRNPU-202ENST00000366525 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
HNRNPU-202ENST00000366525 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
HNRNPU-202ENST00000366525 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
HNRNPU-202ENST00000366525 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
HNRNPU-202ENST00000366525 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
HNRNPU-202ENST00000366525 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-202ENST00000366525 SHPRHQ149N8 1683 aa12.14□□□□□ -0.47
HNRNPU-202ENST00000366525 TSC1Q92574 1164 aa12.14□□□□□ -0.47
HNRNPU-202ENST00000366525 SMC4Q9NTJ3 1288 aa12.14□□□□□ -0.47
HNRNPU-202ENST00000366525 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 NUCB1Q02818 461 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 DDX19BQ9UMR2 479 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 MADDQ8WXG6 1647 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 KDM5AP29375 1690 aaKnown RBP12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 CEP152O94986 1710 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 MCM5P33992 734 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
HNRNPU-202ENST00000366525 PKP1Q13835 747 aa12.12□□□□□ -0.47
HNRNPU-202ENST00000366525 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
HNRNPU-202ENST00000366525 UNC13BO14795 1591 aa12.12□□□□□ -0.47
HNRNPU-202ENST00000366525 CBX1P83916 185 aa12.12□□□□□ -0.47
HNRNPU-202ENST00000366525 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
HNRNPU-202ENST00000366525 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms