RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 A2MP01023 1474 aa17.3■□□□□ 0.36
CTR9-201ENST00000361367 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
CTR9-201ENST00000361367 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
CTR9-201ENST00000361367 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
CTR9-201ENST00000361367 STRN4Q9NRL3 753 aa17.29■□□□□ 0.36
CTR9-201ENST00000361367 KIF16BQ96L93 1317 aa17.29■□□□□ 0.36
CTR9-201ENST00000361367 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
CTR9-201ENST00000361367 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
CTR9-201ENST00000361367 XPCQ01831 940 aaPredicted RBP17.29■□□□□ 0.36
CTR9-201ENST00000361367 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
CTR9-201ENST00000361367 NOS1P29475 1434 aa17.29■□□□□ 0.36
CTR9-201ENST00000361367 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
CTR9-201ENST00000361367 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
CTR9-201ENST00000361367 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
CTR9-201ENST00000361367 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
CTR9-201ENST00000361367 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
CTR9-201ENST00000361367 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
CTR9-201ENST00000361367 MSH5O43196 834 aa17.27■□□□□ 0.35
CTR9-201ENST00000361367 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.35
CTR9-201ENST00000361367 ISY1Q9ULR0 285 aaKnown RBP17.27■□□□□ 0.35
CTR9-201ENST00000361367 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
CTR9-201ENST00000361367 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
CTR9-201ENST00000361367 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
CTR9-201ENST00000361367 PRDM11Q9NQV5 511 aa17.26■□□□□ 0.35
CTR9-201ENST00000361367 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
CTR9-201ENST00000361367 CDCA7LQ96GN5 454 aa17.26■□□□□ 0.35
CTR9-201ENST00000361367 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
CTR9-201ENST00000361367 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
CTR9-201ENST00000361367 TNRQ92752 1358 aa17.25■□□□□ 0.35
CTR9-201ENST00000361367 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
CTR9-201ENST00000361367 G3V3G9 751 aa17.25■□□□□ 0.35
CTR9-201ENST00000361367 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
CTR9-201ENST00000361367 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
CTR9-201ENST00000361367 ABCC10Q5T3U5 1492 aa17.23■□□□□ 0.35
CTR9-201ENST00000361367 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
CTR9-201ENST00000361367 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
CTR9-201ENST00000361367 RBM33Q96EV2 1170 aaKnown RBP17.23■□□□□ 0.35
CTR9-201ENST00000361367 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
CTR9-201ENST00000361367 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
CTR9-201ENST00000361367 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
CTR9-201ENST00000361367 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
CTR9-201ENST00000361367 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.35
CTR9-201ENST00000361367 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.35
CTR9-201ENST00000361367 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.35
CTR9-201ENST00000361367 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
CTR9-201ENST00000361367 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
CTR9-201ENST00000361367 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
CTR9-201ENST00000361367 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
CTR9-201ENST00000361367 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
CTR9-201ENST00000361367 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
CTR9-201ENST00000361367 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
CTR9-201ENST00000361367 FOXO3O43524 673 aa17.19■□□□□ 0.34
CTR9-201ENST00000361367 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
CTR9-201ENST00000361367 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
CTR9-201ENST00000361367 TCOF1Q13428 1488 aaKnown RBP17.19■□□□□ 0.34
CTR9-201ENST00000361367 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
CTR9-201ENST00000361367 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
CTR9-201ENST00000361367 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
CTR9-201ENST00000361367 TRIM44Q96DX7 344 aaPredicted RBP17.18■□□□□ 0.34
CTR9-201ENST00000361367 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
CTR9-201ENST00000361367 TWISTNBQ3B726 338 aaPredicted RBP17.17■□□□□ 0.34
CTR9-201ENST00000361367 CDK11BP21127 795 aaKnown RBP17.17■□□□□ 0.34
CTR9-201ENST00000361367 TSR2Q969E8 191 aaKnown RBP17.17■□□□□ 0.34
CTR9-201ENST00000361367 NME9Q86XW9 330 aa17.17■□□□□ 0.34
CTR9-201ENST00000361367 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
CTR9-201ENST00000361367 FCHSD2O94868 740 aa17.16■□□□□ 0.34
CTR9-201ENST00000361367 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
CTR9-201ENST00000361367 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
CTR9-201ENST00000361367 SLKQ9H2G2 1235 aaPredicted RBP17.16■□□□□ 0.34
CTR9-201ENST00000361367 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
CTR9-201ENST00000361367 G3BP1Q13283 466 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTR9-201ENST00000361367 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
CTR9-201ENST00000361367 PTMAP06454 111 aaKnown RBP17.14■□□□□ 0.33
CTR9-201ENST00000361367 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
CTR9-201ENST00000361367 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
CTR9-201ENST00000361367 TOMM22Q9NS69 142 aa17.13■□□□□ 0.33
CTR9-201ENST00000361367 TULP1O00294 542 aaPredicted RBP17.13■□□□□ 0.33
CTR9-201ENST00000361367 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
CTR9-201ENST00000361367 PLCB2Q00722 1185 aa17.13■□□□□ 0.33
CTR9-201ENST00000361367 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
CTR9-201ENST00000361367 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
CTR9-201ENST00000361367 CFAP43Q8NDM7 1665 aa17.12■□□□□ 0.33
CTR9-201ENST00000361367 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
CTR9-201ENST00000361367 CABP4P57796 275 aa17.12■□□□□ 0.33
CTR9-201ENST00000361367 AAMPQ13685 434 aa17.12■□□□□ 0.33
CTR9-201ENST00000361367 SHANK2Q9UPX8 1470 aa17.11■□□□□ 0.33
CTR9-201ENST00000361367 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
CTR9-201ENST00000361367 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
CTR9-201ENST00000361367 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
CTR9-201ENST00000361367 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
CTR9-201ENST00000361367 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
CTR9-201ENST00000361367 PDE4AP27815 886 aa17.1■□□□□ 0.33
CTR9-201ENST00000361367 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
CTR9-201ENST00000361367 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
CTR9-201ENST00000361367 GNAI3P08754 354 aa17.09■□□□□ 0.33
CTR9-201ENST00000361367 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
CTR9-201ENST00000361367 LRRFIP1Q32MZ4 808 aaKnown RBP17.09■□□□□ 0.33
CTR9-201ENST00000361367 EMILIN1Q9Y6C2 1016 aa17.09■□□□□ 0.33
CTR9-201ENST00000361367 ST18O60284 1047 aa17.08■□□□□ 0.32
CTR9-201ENST00000361367 TMPOP42166 694 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms