RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 STIM1Q13586 685 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 INTS3Q68E01 1043 aaKnown RBP10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 VPS37DQ86XT2 251 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 CDK5RAP3Q96JB5 506 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 AEBP1Q8IUX7 1158 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 TSPY26PQ9H489 355 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 SEPT6Q14141 434 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 SDF4Q9BRK5 362 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 UQCRHLA0A096LP55 91 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 UQCRHP07919 91 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 MAP9Q49MG5 647 aa10.03□□□□□ -0.8
NCKAP1-202ENST00000361354 CCDC102AQ96A19 550 aa10.02□□□□□ -0.8
NCKAP1-202ENST00000361354 CALCOCO1Q9P1Z2 691 aa10.02□□□□□ -0.8
NCKAP1-202ENST00000361354 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.8
NCKAP1-202ENST00000361354 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.8
NCKAP1-202ENST00000361354 DDX23Q9BUQ8 820 aaKnown RBP10.02□□□□□ -0.8
NCKAP1-202ENST00000361354 PDCL2Q8N4E4 241 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 MAP2K1Q02750 393 aaPredicted RBP10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 LUZP1Q86V48 1076 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 ARHGAP35Q9NRY4 1499 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 MICALCLQ6ZW33 695 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 PDCP20941 246 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 TICAM2Q86XR7 235 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 DHX37Q8IY37 1157 aaKnown RBP10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 RALYLQ86SE5 291 aaKnown RBP10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 FAM193AP78312 1265 aa10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 SAFB2Q14151 953 aaKnown RBP eCLIP10.02□□□□□ -0.81
NCKAP1-202ENST00000361354 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
NCKAP1-202ENST00000361354 TERF2IPQ9NYB0 399 aa10.01□□□□□ -0.81
NCKAP1-202ENST00000361354 TMCO3Q6UWJ1 677 aa10.01□□□□□ -0.81
NCKAP1-202ENST00000361354 PPFIBP1Q86W92 1011 aa10.01□□□□□ -0.81
NCKAP1-202ENST00000361354 NLRP13Q86W25 1043 aa10.01□□□□□ -0.81
NCKAP1-202ENST00000361354 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
NCKAP1-202ENST00000361354 ERC2O15083 957 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 RBM10P98175 930 aaKnown RBP10□□□□□ -0.81
NCKAP1-202ENST00000361354 IFIT2P09913 472 aaKnown RBP10□□□□□ -0.81
NCKAP1-202ENST00000361354 DDX19BQ9UMR2 479 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 SLC4A3P48751 1232 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 JAKMIP3Q5VZ66 844 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 SIN3AQ96ST3 1273 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 MCM3P25205 808 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 DACH1Q9UI36 760 aa10□□□□□ -0.81
NCKAP1-202ENST00000361354 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 CRACR2AQ9BSW2 395 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 ANKRD18BA2A2Z9 1011 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 CBFA2T2O43439 604 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 C9orf78Q9NZ63 289 aaPredicted RBP9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 CLGNO14967 610 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 SART3Q15020 963 aaKnown RBP9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 LRRFIP2Q9Y608 721 aaKnown RBP9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 JMYQ8N9B5 988 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 GPATCH11Q8N954 259 aa9.99□□□□□ -0.81
NCKAP1-202ENST00000361354 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 CCDC192P0DO97 292 aa9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 FOSBP53539 338 aa9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 SMC1AQ14683 1233 aaKnown RBP9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 SERPINC1P01008 464 aa9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 DAAM2Q86T65 1068 aa9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 PSMA5P28066 241 aa9.98□□□□□ -0.81
NCKAP1-202ENST00000361354 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 RRP1P56182 461 aaKnown RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 SETD5Q9C0A6 1442 aa9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 TRIM21P19474 475 aaKnown RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 BRPF1P55201 1214 aaPredicted RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 KIF2AO00139 706 aaPredicted RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 RNF214Q8ND24 703 aa9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 POLR3GO15318 223 aaPredicted RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 ZNF396Q96N95 335 aaPredicted RBP9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 SPC24Q8NBT2 197 aa9.97□□□□□ -0.81
NCKAP1-202ENST00000361354 GCOM1H8Y6P7 765 aaPredicted RBP9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 NEBLO76041 1014 aa9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 MYZAPP0CAP1 466 aa9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 FAM114A1Q8IWE2 563 aa9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 CCDC148Q8NFR7 591 aa9.96□□□□□ -0.81
NCKAP1-202ENST00000361354 KRT18P05783 430 aaKnown RBP9.96□□□□□ -0.82
NCKAP1-202ENST00000361354 E9PSI1 815 aa9.96□□□□□ -0.82
NCKAP1-202ENST00000361354 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
NCKAP1-202ENST00000361354 WDR66Q8TBY9 1149 aa9.96□□□□□ -0.82
NCKAP1-202ENST00000361354 ZWINTO95229 277 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 C6orf163Q5TEZ5 329 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 STK26Q9P289 416 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 GIGYF2Q6Y7W6 1299 aaKnown RBP9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 MCM2P49736 904 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 NFKBIBQ15653 356 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 ANAPC15P60006 121 aa9.95□□□□□ -0.82
NCKAP1-202ENST00000361354 IPO4Q8TEX9 1081 aaKnown RBP9.94□□□□□ -0.82
NCKAP1-202ENST00000361354 AMPHP49418 695 aa9.94□□□□□ -0.82
NCKAP1-202ENST00000361354 FYB1O15117 783 aa9.94□□□□□ -0.82
NCKAP1-202ENST00000361354 SETSIPP0DME0 302 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms