RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 ADGRL1O94910 1474 aa26.61■■□□□ 1.85
TRIM3-202ENST00000359518 MAPK8IP3Q9UPT6 1336 aa26.61■■□□□ 1.85
TRIM3-202ENST00000359518 NGEFQ8N5V2 710 aa26.61■■□□□ 1.85
TRIM3-202ENST00000359518 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.61■■□□□ 1.85
TRIM3-202ENST00000359518 U2AF1L5P0DN76 240 aaPredicted RBP26.6■■□□□ 1.85
TRIM3-202ENST00000359518 U2AF1Q01081 240 aaKnown RBP eCLIP26.6■■□□□ 1.85
TRIM3-202ENST00000359518 DEPDC5O75140 1603 aa26.6■■□□□ 1.85
TRIM3-202ENST00000359518 PDZRN3Q9UPQ7 1066 aa26.59■■□□□ 1.85
TRIM3-202ENST00000359518 UHRF1BP1LA0JNW5 1464 aa26.57■■□□□ 1.84
TRIM3-202ENST00000359518 SPRYD3Q8NCJ5 442 aa26.57■■□□□ 1.84
TRIM3-202ENST00000359518 MYOM2P54296 1465 aa26.56■■□□□ 1.84
TRIM3-202ENST00000359518 TSR2Q969E8 191 aaKnown RBP26.56■■□□□ 1.84
TRIM3-202ENST00000359518 PMFBP1Q8TBY8 1022 aa26.55■■□□□ 1.84
TRIM3-202ENST00000359518 CFAP53Q96M91 514 aa26.55■■□□□ 1.84
TRIM3-202ENST00000359518 KIAA1210Q9ULL0 1709 aa26.55■■□□□ 1.84
TRIM3-202ENST00000359518 VWDEQ8N2E2 1590 aa26.54■■□□□ 1.84
TRIM3-202ENST00000359518 CABP2Q9NPB3 220 aa26.54■■□□□ 1.84
TRIM3-202ENST00000359518 POGKQ9P215 609 aa26.53■■□□□ 1.84
TRIM3-202ENST00000359518 BECN1Q14457 450 aa26.53■■□□□ 1.84
TRIM3-202ENST00000359518 C14orf93Q9H972 538 aaKnown RBP26.53■■□□□ 1.84
TRIM3-202ENST00000359518 KIF1BO60333 1816 aa26.53■■□□□ 1.84
TRIM3-202ENST00000359518 MROH2AA6NES4 1674 aa26.52■■□□□ 1.84
TRIM3-202ENST00000359518 U2SURPO15042 1029 aaKnown RBP26.52■■□□□ 1.84
TRIM3-202ENST00000359518 WDR63Q8IWG1 891 aa26.51■■□□□ 1.83
TRIM3-202ENST00000359518 INO80Q9ULG1 1556 aaPredicted RBP26.51■■□□□ 1.83
TRIM3-202ENST00000359518 MROH1Q8NDA8 1641 aa26.51■■□□□ 1.83
TRIM3-202ENST00000359518 NINLQ9Y2I6 1382 aa26.5■■□□□ 1.83
TRIM3-202ENST00000359518 FTSJ3Q8IY81 847 aaKnown RBP26.5■■□□□ 1.83
TRIM3-202ENST00000359518 UPF2Q9HAU5 1272 aaKnown RBP26.5■■□□□ 1.83
TRIM3-202ENST00000359518 ARXQ96QS3 562 aa26.49■■□□□ 1.83
TRIM3-202ENST00000359518 STK26Q9P289 416 aa26.49■■□□□ 1.83
TRIM3-202ENST00000359518 SBNO2Q9Y2G9 1366 aa26.49■■□□□ 1.83
TRIM3-202ENST00000359518 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
TRIM3-202ENST00000359518 RWDD1Q9H446 243 aaPredicted RBP26.48■■□□□ 1.83
TRIM3-202ENST00000359518 EFCAB6Q5THR3 1501 aa26.47■■□□□ 1.83
TRIM3-202ENST00000359518 MYH16Q9H6N6 1097 aa26.47■■□□□ 1.83
TRIM3-202ENST00000359518 SHPRHQ149N8 1683 aa26.46■■□□□ 1.83
TRIM3-202ENST00000359518 PPRC1Q5VV67 1664 aaKnown RBP26.46■■□□□ 1.83
TRIM3-202ENST00000359518 GGNBP2Q9H3C7 697 aa26.45■■□□□ 1.83
TRIM3-202ENST00000359518 ARAP3Q8WWN8 1544 aa26.45■■□□□ 1.82
TRIM3-202ENST00000359518 SMC4Q9NTJ3 1288 aa26.44■■□□□ 1.82
TRIM3-202ENST00000359518 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
TRIM3-202ENST00000359518 MVPQ14764 893 aaKnown RBP26.44■■□□□ 1.82
TRIM3-202ENST00000359518 TBC1D2Q9BYX2 928 aa26.44■■□□□ 1.82
TRIM3-202ENST00000359518 ZKSCAN2Q63HK3 967 aa26.43■■□□□ 1.82
TRIM3-202ENST00000359518 DZIP1LQ8IYY4 767 aaKnown RBP26.43■■□□□ 1.82
TRIM3-202ENST00000359518 TBC1D32Q96NH3 1257 aa26.42■■□□□ 1.82
TRIM3-202ENST00000359518 NPATQ14207 1427 aa26.42■■□□□ 1.82
TRIM3-202ENST00000359518 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
TRIM3-202ENST00000359518 IQSEC2Q5JU85 1478 aa26.41■■□□□ 1.82
TRIM3-202ENST00000359518 ZNF518AQ6AHZ1 1483 aa26.41■■□□□ 1.82
TRIM3-202ENST00000359518 EVC2Q86UK5 1308 aa26.41■■□□□ 1.82
TRIM3-202ENST00000359518 NLRP1Q9C000 1473 aa26.41■■□□□ 1.82
TRIM3-202ENST00000359518 ABCA9Q8IUA7 1624 aa26.41■■□□□ 1.82
TRIM3-202ENST00000359518 ITPRIPQ8IWB1 547 aa26.41■■□□□ 1.82
TRIM3-202ENST00000359518 MFAP1P55081 439 aaKnown RBP26.4■■□□□ 1.82
TRIM3-202ENST00000359518 SRPK2P78362 688 aaKnown RBP26.4■■□□□ 1.82
TRIM3-202ENST00000359518 CCDC27Q2M243 656 aa26.39■■□□□ 1.81
TRIM3-202ENST00000359518 ASXL2Q76L83 1435 aa26.38■■□□□ 1.81
TRIM3-202ENST00000359518 IFT172Q9UG01 1749 aa26.38■■□□□ 1.81
TRIM3-202ENST00000359518 QRICH2Q9H0J4 1663 aa26.38■■□□□ 1.81
TRIM3-202ENST00000359518 SSH1Q8WYL5 1049 aa26.38■■□□□ 1.81
TRIM3-202ENST00000359518 TRIM27P14373 513 aa26.37■■□□□ 1.81
TRIM3-202ENST00000359518 ANTXR1Q9H6X2 564 aa26.37■■□□□ 1.81
TRIM3-202ENST00000359518 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
TRIM3-202ENST00000359518 VIRMAQ69YN4 1812 aaKnown RBP26.36■■□□□ 1.81
TRIM3-202ENST00000359518 ADGRB3O60242 1522 aa26.36■■□□□ 1.81
TRIM3-202ENST00000359518 KIDINS220Q9ULH0 1771 aa26.36■■□□□ 1.81
TRIM3-202ENST00000359518 NEURL4Q96JN8 1562 aa26.35■■□□□ 1.81
TRIM3-202ENST00000359518 MYO3AQ8NEV4 1616 aa26.35■■□□□ 1.81
TRIM3-202ENST00000359518 TMPOP42166 694 aaKnown RBP26.34■■□□□ 1.81
TRIM3-202ENST00000359518 ADGRB1O14514 1584 aa26.34■■□□□ 1.81
TRIM3-202ENST00000359518 AAMPQ13685 434 aa26.33■■□□□ 1.81
TRIM3-202ENST00000359518 GZF1Q9H116 711 aaPredicted RBP26.33■■□□□ 1.81
TRIM3-202ENST00000359518 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
TRIM3-202ENST00000359518 ANKRD36BQ8N2N9 1353 aa26.32■■□□□ 1.8
TRIM3-202ENST00000359518 MINK1Q8N4C8 1332 aaPredicted RBP26.32■■□□□ 1.8
TRIM3-202ENST00000359518 TRIM35Q9UPQ4 493 aa26.32■■□□□ 1.8
TRIM3-202ENST00000359518 VGFO15240 615 aaPredicted RBP26.31■■□□□ 1.8
TRIM3-202ENST00000359518 RAPGEF3O95398 923 aa26.31■■□□□ 1.8
TRIM3-202ENST00000359518 C22orf23Q9BZE7 217 aa26.31■■□□□ 1.8
TRIM3-202ENST00000359518 SETBP1Q9Y6X0 1596 aa26.3■■□□□ 1.8
TRIM3-202ENST00000359518 FBLN1P23142 703 aa26.3■■□□□ 1.8
TRIM3-202ENST00000359518 RIPK4P57078 832 aa26.3■■□□□ 1.8
TRIM3-202ENST00000359518 TMEM57Q8N5G2 664 aa26.29■■□□□ 1.8
TRIM3-202ENST00000359518 A0A1W2PP64 1363 aa26.28■■□□□ 1.8
TRIM3-202ENST00000359518 NPM1P06748 294 aaKnown RBP eCLIP26.28■■□□□ 1.8
TRIM3-202ENST00000359518 ATF7IPQ6VMQ6 1270 aa26.28■■□□□ 1.8
TRIM3-202ENST00000359518 EIF5BO60841 1220 aaKnown RBP26.28■■□□□ 1.8
TRIM3-202ENST00000359518 PLEKHF1Q96S99 279 aa26.28■■□□□ 1.8
TRIM3-202ENST00000359518 CD109Q6YHK3 1445 aa26.27■■□□□ 1.8
TRIM3-202ENST00000359518 RPGRIP1LQ68CZ1 1315 aa26.27■■□□□ 1.8
TRIM3-202ENST00000359518 TULP4Q9NRJ4 1543 aa26.26■■□□□ 1.79
TRIM3-202ENST00000359518 IDI1Q13907 227 aa26.26■■□□□ 1.79
TRIM3-202ENST00000359518 DDX19BQ9UMR2 479 aa26.25■■□□□ 1.79
TRIM3-202ENST00000359518 PPLO60437 1756 aa26.25■■□□□ 1.79
TRIM3-202ENST00000359518 FYB1O15117 783 aa26.25■■□□□ 1.79
TRIM3-202ENST00000359518 LNPKQ9C0E8 428 aa26.24■■□□□ 1.79
TRIM3-202ENST00000359518 LMTK2Q8IWU2 1503 aa26.23■■□□□ 1.79
TRIM3-202ENST00000359518 ZC3H13Q5T200 1668 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms