RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
CCL20-201ENST00000358813 ARID3CA6NKF2 412 aa9.52□□□□□ -0.89
CCL20-201ENST00000358813 USP46P62068 366 aa9.52□□□□□ -0.89
CCL20-201ENST00000358813 KCNC4Q03721 635 aa9.52□□□□□ -0.89
CCL20-201ENST00000358813 NR1I2O75469 434 aa9.51□□□□□ -0.89
CCL20-201ENST00000358813 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
CCL20-201ENST00000358813 NPM2Q86SE8 214 aaKnown RBP9.51□□□□□ -0.89
CCL20-201ENST00000358813 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
CCL20-201ENST00000358813 MORN1Q5T089 497 aa9.5□□□□□ -0.89
CCL20-201ENST00000358813 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
CCL20-201ENST00000358813 ZNF516Q92618 1163 aa9.5□□□□□ -0.89
CCL20-201ENST00000358813 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
CCL20-201ENST00000358813 A6NJR5 290 aa9.49□□□□□ -0.89
CCL20-201ENST00000358813 HOXA2O43364 376 aa9.49□□□□□ -0.89
CCL20-201ENST00000358813 ZPR1O75312 459 aa9.49□□□□□ -0.89
CCL20-201ENST00000358813 DIXDC1Q155Q3 683 aa9.49□□□□□ -0.89
CCL20-201ENST00000358813 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
CCL20-201ENST00000358813 SCUBE3Q8IX30 993 aa9.48□□□□□ -0.89
CCL20-201ENST00000358813 PCMTD1Q96MG8 357 aaPredicted RBP9.48□□□□□ -0.89
CCL20-201ENST00000358813 HLA-CQ95604 372 aa9.47□□□□□ -0.89
CCL20-201ENST00000358813 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
CCL20-201ENST00000358813 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
CCL20-201ENST00000358813 NDUFV2P19404 249 aa9.45□□□□□ -0.9
CCL20-201ENST00000358813 GUCA2AQ02747 115 aa9.45□□□□□ -0.9
CCL20-201ENST00000358813 TRAK2O60296 914 aa9.44□□□□□ -0.9
CCL20-201ENST00000358813 Q3C1V9 767 aa9.44□□□□□ -0.9
CCL20-201ENST00000358813 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
CCL20-201ENST00000358813 NCAPD3P42695 1498 aa9.44□□□□□ -0.9
CCL20-201ENST00000358813 SMARCA2P51531 1590 aa9.43□□□□□ -0.9
CCL20-201ENST00000358813 TLL1O43897 1013 aa9.43□□□□□ -0.9
CCL20-201ENST00000358813 FMNL1O95466 1100 aaPredicted RBP9.43□□□□□ -0.9
CCL20-201ENST00000358813 FDX1P10109 184 aa9.43□□□□□ -0.9
CCL20-201ENST00000358813 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
CCL20-201ENST00000358813 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
CCL20-201ENST00000358813 RIC3Q7Z5B4 369 aa9.42□□□□□ -0.9
CCL20-201ENST00000358813 CCDC9Q9Y3X0 531 aaKnown RBP9.42□□□□□ -0.9
CCL20-201ENST00000358813 ADH1BP00325 375 aa9.41□□□□□ -0.9
CCL20-201ENST00000358813 RSBN1LQ6PCB5 846 aaPredicted RBP9.41□□□□□ -0.9
CCL20-201ENST00000358813 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
CCL20-201ENST00000358813 SPSB2Q99619 263 aa9.41□□□□□ -0.9
CCL20-201ENST00000358813 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
CCL20-201ENST00000358813 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
CCL20-201ENST00000358813 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
CCL20-201ENST00000358813 THAP11Q96EK4 314 aa9.4□□□□□ -0.9
CCL20-201ENST00000358813 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
CCL20-201ENST00000358813 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
CCL20-201ENST00000358813 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.91
CCL20-201ENST00000358813 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
CCL20-201ENST00000358813 SPTLC1O15269 473 aa9.39□□□□□ -0.91
CCL20-201ENST00000358813 GJA5P36382 358 aa9.39□□□□□ -0.91
CCL20-201ENST00000358813 RNF19BQ6ZMZ0 732 aa9.39□□□□□ -0.91
CCL20-201ENST00000358813 ATP1B4Q9UN42 357 aaPredicted RBP9.39□□□□□ -0.91
CCL20-201ENST00000358813 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
CCL20-201ENST00000358813 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
CCL20-201ENST00000358813 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
CCL20-201ENST00000358813 SYMPKQ92797 1274 aaKnown RBP9.38□□□□□ -0.91
CCL20-201ENST00000358813 A0A0G2JS52 829 aa9.37□□□□□ -0.91
CCL20-201ENST00000358813 GGCXP38435 758 aa9.37□□□□□ -0.91
CCL20-201ENST00000358813 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
CCL20-201ENST00000358813 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
CCL20-201ENST00000358813 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
CCL20-201ENST00000358813 SLC6A16Q9GZN6 736 aa9.37□□□□□ -0.91
CCL20-201ENST00000358813 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
CCL20-201ENST00000358813 NESP48681 1621 aa9.37□□□□□ -0.91
CCL20-201ENST00000358813 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
CCL20-201ENST00000358813 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CCL20-201ENST00000358813 PDS5BQ9NTI5 1447 aa9.36□□□□□ -0.91
CCL20-201ENST00000358813 S1PR4O95977 384 aa9.35□□□□□ -0.91
CCL20-201ENST00000358813 MTMR2Q13614 643 aa9.35□□□□□ -0.91
CCL20-201ENST00000358813 MCM6Q14566 821 aa9.35□□□□□ -0.91
CCL20-201ENST00000358813 PPP1R18Q6NYC8 613 aa9.35□□□□□ -0.91
CCL20-201ENST00000358813 RETREG3Q86VR2 466 aa9.34□□□□□ -0.91
CCL20-201ENST00000358813 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
CCL20-201ENST00000358813 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
CCL20-201ENST00000358813 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
CCL20-201ENST00000358813 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
CCL20-201ENST00000358813 NUTM2BA6NNL0 878 aaPredicted RBP9.33□□□□□ -0.92
CCL20-201ENST00000358813 NUTM2EB1AL46 878 aaPredicted RBP9.33□□□□□ -0.92
CCL20-201ENST00000358813 RAD21O60216 631 aa9.33□□□□□ -0.92
CCL20-201ENST00000358813 TUSC1Q2TAM9 212 aa9.33□□□□□ -0.92
CCL20-201ENST00000358813 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
CCL20-201ENST00000358813 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
CCL20-201ENST00000358813 NUTM2AQ8IVF1 878 aaPredicted RBP9.33□□□□□ -0.92
CCL20-201ENST00000358813 SMARCA4P51532 1647 aa9.33□□□□□ -0.92
CCL20-201ENST00000358813 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
CCL20-201ENST00000358813 PRPF38BQ5VTL8 546 aaKnown RBP9.32□□□□□ -0.92
CCL20-201ENST00000358813 PROSER2Q86WR7 435 aaPredicted RBP9.32□□□□□ -0.92
CCL20-201ENST00000358813 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
CCL20-201ENST00000358813 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
CCL20-201ENST00000358813 CCDC97Q96F63 343 aaPredicted RBP9.32□□□□□ -0.92
CCL20-201ENST00000358813 PRDM9Q9NQV7 894 aa9.32□□□□□ -0.92
CCL20-201ENST00000358813 SERPINA10Q9UK55 444 aa9.32□□□□□ -0.92
CCL20-201ENST00000358813 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CCL20-201ENST00000358813 QPCTQ16769 361 aa9.31□□□□□ -0.92
CCL20-201ENST00000358813 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
CCL20-201ENST00000358813 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
CCL20-201ENST00000358813 PPEF1O14829 653 aaPredicted RBP9.3□□□□□ -0.92
CCL20-201ENST00000358813 LILRB3O75022 631 aa9.3□□□□□ -0.92
CCL20-201ENST00000358813 PRR7Q8TB68 274 aa9.3□□□□□ -0.92
CCL20-201ENST00000358813 ZNF777Q9ULD5 760 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms