RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 RRP7AQ9Y3A4 280 aaKnown RBP32.68■■■□□ 2.82
HDGF-201ENST00000357325 NEUROD2Q15784 382 aa32.67■■■□□ 2.82
HDGF-201ENST00000357325 CABP2Q9NPB3 220 aa32.67■■■□□ 2.82
HDGF-201ENST00000357325 KDM2BQ8NHM5 1336 aa32.67■■■□□ 2.82
HDGF-201ENST00000357325 TULP4Q9NRJ4 1543 aa32.66■■■□□ 2.82
HDGF-201ENST00000357325 RICTORQ6R327 1708 aa32.66■■■□□ 2.82
HDGF-201ENST00000357325 VGFO15240 615 aaPredicted RBP32.66■■■□□ 2.82
HDGF-201ENST00000357325 STK26Q9P289 416 aa32.66■■■□□ 2.82
HDGF-201ENST00000357325 NKTRP30414 1462 aaKnown RBP32.66■■■□□ 2.82
HDGF-201ENST00000357325 SHPRHQ149N8 1683 aa32.65■■■□□ 2.82
HDGF-201ENST00000357325 WWC1Q8IX03 1113 aa32.63■■■□□ 2.81
HDGF-201ENST00000357325 ARHGEF28Q8N1W1 1705 aaKnown RBP32.63■■■□□ 2.81
HDGF-201ENST00000357325 E9PSI1 815 aa32.62■■■□□ 2.81
HDGF-201ENST00000357325 MTHFSP49914 203 aa32.62■■■□□ 2.81
HDGF-201ENST00000357325 MS4A1P11836 297 aa32.62■■■□□ 2.81
HDGF-201ENST00000357325 NBR1Q14596 966 aa32.6■■■□□ 2.81
HDGF-201ENST00000357325 CYB5RLQ6IPT4 315 aa32.6■■■□□ 2.81
HDGF-201ENST00000357325 FBXO31Q5XUX0 539 aaPredicted RBP32.59■■■□□ 2.81
HDGF-201ENST00000357325 EVC2Q86UK5 1308 aa32.59■■■□□ 2.81
HDGF-201ENST00000357325 MYO5BQ9ULV0 1848 aa32.58■■■□□ 2.81
HDGF-201ENST00000357325 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.58■■■□□ 2.81
HDGF-201ENST00000357325 ZBTB47Q9UFB7 747 aaPredicted RBP32.58■■■□□ 2.81
HDGF-201ENST00000357325 CGNL1Q0VF96 1302 aa32.57■■■□□ 2.8
HDGF-201ENST00000357325 ARHGAP31Q2M1Z3 1444 aa32.56■■■□□ 2.8
HDGF-201ENST00000357325 TCP11L2Q8N4U5 519 aa32.54■■■□□ 2.8
HDGF-201ENST00000357325 CENPQQ7L2Z9 268 aaPredicted RBP32.52■■■□□ 2.8
HDGF-201ENST00000357325 RUNDC1Q96C34 613 aa32.52■■■□□ 2.8
HDGF-201ENST00000357325 ANKRD36BQ8N2N9 1353 aa32.52■■■□□ 2.8
HDGF-201ENST00000357325 SLC52A1Q9NWF4 448 aa32.5■■■□□ 2.79
HDGF-201ENST00000357325 USP32Q8NFA0 1604 aa32.49■■■□□ 2.79
HDGF-201ENST00000357325 IQSEC2Q5JU85 1478 aa32.48■■■□□ 2.79
HDGF-201ENST00000357325 MINK1Q8N4C8 1332 aaPredicted RBP32.48■■■□□ 2.79
HDGF-201ENST00000357325 SRPK2P78362 688 aaKnown RBP32.47■■■□□ 2.79
HDGF-201ENST00000357325 PREX1Q8TCU6 1659 aa32.47■■■□□ 2.79
HDGF-201ENST00000357325 A0A1W2PP64 1363 aa32.46■■■□□ 2.79
HDGF-201ENST00000357325 TMEM131LA2VDJ0 1609 aa32.46■■■□□ 2.79
HDGF-201ENST00000357325 PANK1Q8TE04 598 aa32.45■■■□□ 2.79
HDGF-201ENST00000357325 PRAM1Q96QH2 718 aa32.45■■■□□ 2.78
HDGF-201ENST00000357325 GGNBP2Q9H3C7 697 aa32.45■■■□□ 2.78
HDGF-201ENST00000357325 NGEFQ8N5V2 710 aa32.44■■■□□ 2.78
HDGF-201ENST00000357325 PUS7Q96PZ0 661 aaKnown RBP32.43■■■□□ 2.78
HDGF-201ENST00000357325 PHF23Q9BUL5 403 aaPredicted RBP32.43■■■□□ 2.78
HDGF-201ENST00000357325 ZFYVE9O95405 1425 aa32.42■■■□□ 2.78
HDGF-201ENST00000357325 IGHDP01880 384 aa32.42■■■□□ 2.78
HDGF-201ENST00000357325 RGS3P49796 1198 aa32.41■■■□□ 2.78
HDGF-201ENST00000357325 FAM69CQ0P6D2 419 aa32.41■■■□□ 2.78
HDGF-201ENST00000357325 TNNQ9UQP3 1299 aa32.41■■■□□ 2.78
HDGF-201ENST00000357325 PTPRMP28827 1452 aa32.41■■■□□ 2.78
HDGF-201ENST00000357325 U2AF1L5P0DN76 240 aaPredicted RBP32.41■■■□□ 2.78
HDGF-201ENST00000357325 U2AF1Q01081 240 aaKnown RBP eCLIP32.41■■■□□ 2.78
HDGF-201ENST00000357325 COG6Q9Y2V7 657 aa32.41■■■□□ 2.78
HDGF-201ENST00000357325 FRAT1Q92837 279 aaPredicted RBP32.4■■■□□ 2.78
HDGF-201ENST00000357325 CFAP53Q96M91 514 aa32.4■■■□□ 2.78
HDGF-201ENST00000357325 BCL2L13Q9BXK5 485 aa32.39■■■□□ 2.78
HDGF-201ENST00000357325 CANXP27824 592 aaKnown RBP32.36■■■□□ 2.77
HDGF-201ENST00000357325 RARSP54136 660 aaKnown RBP32.36■■■□□ 2.77
HDGF-201ENST00000357325 POGKQ9P215 609 aa32.36■■■□□ 2.77
HDGF-201ENST00000357325 YTHDC2Q9H6S0 1430 aaKnown RBP32.36■■■□□ 2.77
HDGF-201ENST00000357325 ABCC11Q96J66 1382 aa32.35■■■□□ 2.77
HDGF-201ENST00000357325 C8orf34Q49A92 452 aa32.34■■■□□ 2.77
HDGF-201ENST00000357325 NSD2O96028 1365 aa32.33■■■□□ 2.77
HDGF-201ENST00000357325 CD163L1Q9NR16 1453 aa32.33■■■□□ 2.77
HDGF-201ENST00000357325 FYB1O15117 783 aa32.32■■■□□ 2.76
HDGF-201ENST00000357325 TSPOAP1O95153 1857 aa32.32■■■□□ 2.76
HDGF-201ENST00000357325 PDE3AQ14432 1141 aa32.32■■■□□ 2.76
HDGF-201ENST00000357325 RLBP1P12271 317 aa32.31■■■□□ 2.76
HDGF-201ENST00000357325 WDR63Q8IWG1 891 aa32.31■■■□□ 2.76
HDGF-201ENST00000357325 U2SURPO15042 1029 aaKnown RBP32.3■■■□□ 2.76
HDGF-201ENST00000357325 STAG3Q9UJ98 1225 aa32.3■■■□□ 2.76
HDGF-201ENST00000357325 LAS1LQ9Y4W2 734 aaKnown RBP32.3■■■□□ 2.76
HDGF-201ENST00000357325 ALKQ9UM73 1620 aa32.28■■■□□ 2.76
HDGF-201ENST00000357325 MLECQ14165 292 aa32.28■■■□□ 2.76
HDGF-201ENST00000357325 CLUAP1Q96AJ1 413 aa32.27■■■□□ 2.76
HDGF-201ENST00000357325 CDK19Q9BWU1 502 aa32.27■■■□□ 2.76
HDGF-201ENST00000357325 CCDC27Q2M243 656 aa32.27■■■□□ 2.76
HDGF-201ENST00000357325 FBLN1P23142 703 aa32.26■■■□□ 2.76
HDGF-201ENST00000357325 FAM161AQ3B820 660 aa32.26■■■□□ 2.76
HDGF-201ENST00000357325 DEKP35659 375 aaKnown RBP32.26■■■□□ 2.75
HDGF-201ENST00000357325 WAPLQ7Z5K2 1190 aa32.26■■■□□ 2.75
HDGF-201ENST00000357325 CABP1Q9NZU7 370 aa32.26■■■□□ 2.75
HDGF-201ENST00000357325 TSR2Q969E8 191 aaKnown RBP32.25■■■□□ 2.75
HDGF-201ENST00000357325 SLC4A3P48751 1232 aa32.24■■■□□ 2.75
HDGF-201ENST00000357325 PLEKHF1Q96S99 279 aa32.24■■■□□ 2.75
HDGF-201ENST00000357325 NLRP1Q9C000 1473 aa32.24■■■□□ 2.75
HDGF-201ENST00000357325 ATAD2Q6PL18 1390 aa32.23■■■□□ 2.75
HDGF-201ENST00000357325 COL3A1P02461 1466 aaPredicted RBP32.22■■■□□ 2.75
HDGF-201ENST00000357325 TERF2IPQ9NYB0 399 aa32.22■■■□□ 2.75
HDGF-201ENST00000357325 DIP2BQ9P265 1576 aa32.22■■■□□ 2.75
HDGF-201ENST00000357325 NINLQ9Y2I6 1382 aa32.21■■■□□ 2.75
HDGF-201ENST00000357325 ADGRB2O60241 1585 aa32.21■■■□□ 2.75
HDGF-201ENST00000357325 ARHGEF40Q8TER5 1519 aa32.19■■■□□ 2.74
HDGF-201ENST00000357325 PCDHB15Q9Y5E8 787 aa32.19■■■□□ 2.74
HDGF-201ENST00000357325 TRIM35Q9UPQ4 493 aa32.18■■■□□ 2.74
HDGF-201ENST00000357325 CLTCQ00610 1675 aaKnown RBP32.18■■■□□ 2.74
HDGF-201ENST00000357325 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
HDGF-201ENST00000357325 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
HDGF-201ENST00000357325 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
HDGF-201ENST00000357325 TMPOP42166 694 aaKnown RBP32.17■■■□□ 2.74
HDGF-201ENST00000357325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.17■■■□□ 2.74
HDGF-201ENST00000357325 MYH16Q9H6N6 1097 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms