RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 WWC1Q8IX03 1113 aa20.2■□□□□ 0.82
LINC01565-201ENST00000356020 C14orf93Q9H972 538 aaKnown RBP20.2■□□□□ 0.82
LINC01565-201ENST00000356020 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
LINC01565-201ENST00000356020 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
LINC01565-201ENST00000356020 CFAP65Q6ZU64 1925 aaKnown RBP20.18■□□□□ 0.82
LINC01565-201ENST00000356020 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
LINC01565-201ENST00000356020 RGS3P49796 1198 aa20.18■□□□□ 0.82
LINC01565-201ENST00000356020 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
LINC01565-201ENST00000356020 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
LINC01565-201ENST00000356020 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
LINC01565-201ENST00000356020 GLI2P10070 1586 aa20.16■□□□□ 0.82
LINC01565-201ENST00000356020 ABCC3O15438 1527 aa20.16■□□□□ 0.82
LINC01565-201ENST00000356020 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
LINC01565-201ENST00000356020 ARHGEF28Q8N1W1 1705 aaKnown RBP20.14■□□□□ 0.82
LINC01565-201ENST00000356020 SLC12A5Q9H2X9 1139 aa20.14■□□□□ 0.82
LINC01565-201ENST00000356020 CAMSAP1Q5T5Y3 1602 aa20.14■□□□□ 0.82
LINC01565-201ENST00000356020 DAXXQ9UER7 740 aaPredicted RBP20.13■□□□□ 0.81
LINC01565-201ENST00000356020 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
LINC01565-201ENST00000356020 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
LINC01565-201ENST00000356020 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
LINC01565-201ENST00000356020 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
LINC01565-201ENST00000356020 IGHDP01880 384 aa20.12■□□□□ 0.81
LINC01565-201ENST00000356020 GSE1Q14687 1217 aa20.12■□□□□ 0.81
LINC01565-201ENST00000356020 SIGLEC1Q9BZZ2 1709 aa20.11■□□□□ 0.81
LINC01565-201ENST00000356020 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
LINC01565-201ENST00000356020 TULP4Q9NRJ4 1543 aa20.1■□□□□ 0.81
LINC01565-201ENST00000356020 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
LINC01565-201ENST00000356020 NSD2O96028 1365 aa20.1■□□□□ 0.81
LINC01565-201ENST00000356020 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
LINC01565-201ENST00000356020 TMEM132EQ6IEE7 984 aa20.1■□□□□ 0.81
LINC01565-201ENST00000356020 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
LINC01565-201ENST00000356020 TCP11L2Q8N4U5 519 aa20.1■□□□□ 0.81
LINC01565-201ENST00000356020 MAPK8IP3Q9UPT6 1336 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 SLC4A3P48751 1232 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 GGT6Q6P531 493 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 PANK1Q8TE04 598 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 COG6Q9Y2V7 657 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 NEXMIFQ5QGS0 1516 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
LINC01565-201ENST00000356020 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
LINC01565-201ENST00000356020 ANKRD36BQ8N2N9 1353 aa20.08■□□□□ 0.8
LINC01565-201ENST00000356020 RARSP54136 660 aaKnown RBP20.08■□□□□ 0.8
LINC01565-201ENST00000356020 AAMPQ13685 434 aa20.08■□□□□ 0.8
LINC01565-201ENST00000356020 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.8
LINC01565-201ENST00000356020 ADGRB2O60241 1585 aa20.07■□□□□ 0.8
LINC01565-201ENST00000356020 NFKBIBQ15653 356 aa20.07■□□□□ 0.8
LINC01565-201ENST00000356020 MTHFSP49914 203 aa20.07■□□□□ 0.8
LINC01565-201ENST00000356020 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
LINC01565-201ENST00000356020 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
LINC01565-201ENST00000356020 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
LINC01565-201ENST00000356020 EVC2Q86UK5 1308 aa20.06■□□□□ 0.8
LINC01565-201ENST00000356020 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
LINC01565-201ENST00000356020 FRAT1Q92837 279 aaPredicted RBP20.05■□□□□ 0.8
LINC01565-201ENST00000356020 PMFBP1Q8TBY8 1022 aa20.03■□□□□ 0.8
LINC01565-201ENST00000356020 ZMYM3Q14202 1370 aa20.02■□□□□ 0.79
LINC01565-201ENST00000356020 USP19O94966 1318 aa20.02■□□□□ 0.79
LINC01565-201ENST00000356020 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
LINC01565-201ENST00000356020 DIP2CQ9Y2E4 1556 aa20.01■□□□□ 0.79
LINC01565-201ENST00000356020 MYH16Q9H6N6 1097 aa20■□□□□ 0.79
LINC01565-201ENST00000356020 NEO1Q92859 1461 aa19.99■□□□□ 0.79
LINC01565-201ENST00000356020 ARHGAP31Q2M1Z3 1444 aa19.99■□□□□ 0.79
LINC01565-201ENST00000356020 RLBP1P12271 317 aa19.99■□□□□ 0.79
LINC01565-201ENST00000356020 ZFYVE9O95405 1425 aa19.98■□□□□ 0.79
LINC01565-201ENST00000356020 ANKRD26Q9UPS8 1709 aa19.98■□□□□ 0.79
LINC01565-201ENST00000356020 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
LINC01565-201ENST00000356020 ABCC11Q96J66 1382 aa19.98■□□□□ 0.79
LINC01565-201ENST00000356020 U2AF1L5P0DN76 240 aaPredicted RBP19.97■□□□□ 0.79
LINC01565-201ENST00000356020 U2AF1Q01081 240 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC01565-201ENST00000356020 BRPF3Q9ULD4 1205 aa19.97■□□□□ 0.79
LINC01565-201ENST00000356020 TNNQ9UQP3 1299 aa19.97■□□□□ 0.79
LINC01565-201ENST00000356020 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
LINC01565-201ENST00000356020 BCL2L13Q9BXK5 485 aa19.96■□□□□ 0.79
LINC01565-201ENST00000356020 CABP2Q9NPB3 220 aa19.96■□□□□ 0.79
LINC01565-201ENST00000356020 A0A1W2PP64 1363 aa19.95■□□□□ 0.78
LINC01565-201ENST00000356020 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
LINC01565-201ENST00000356020 COL3A1P02461 1466 aaPredicted RBP19.95■□□□□ 0.78
LINC01565-201ENST00000356020 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
LINC01565-201ENST00000356020 CT47B1P0C2W7 299 aaPredicted RBP19.94■□□□□ 0.78
LINC01565-201ENST00000356020 MYO5BQ9ULV0 1848 aa19.94■□□□□ 0.78
LINC01565-201ENST00000356020 SEC24BO95487 1268 aa19.93■□□□□ 0.78
LINC01565-201ENST00000356020 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
LINC01565-201ENST00000356020 RWDD1Q9H446 243 aaPredicted RBP19.92■□□□□ 0.78
LINC01565-201ENST00000356020 MED14O60244 1454 aa19.92■□□□□ 0.78
LINC01565-201ENST00000356020 MVPQ14764 893 aaKnown RBP19.92■□□□□ 0.78
LINC01565-201ENST00000356020 PDZRN3Q9UPQ7 1066 aa19.92■□□□□ 0.78
LINC01565-201ENST00000356020 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
LINC01565-201ENST00000356020 PTPRMP28827 1452 aa19.91■□□□□ 0.78
LINC01565-201ENST00000356020 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
LINC01565-201ENST00000356020 BECN1Q14457 450 aa19.9■□□□□ 0.78
LINC01565-201ENST00000356020 ATAD2Q6PL18 1390 aa19.9■□□□□ 0.78
LINC01565-201ENST00000356020 IDI1Q13907 227 aa19.9■□□□□ 0.78
LINC01565-201ENST00000356020 TMEM131LA2VDJ0 1609 aa19.9■□□□□ 0.78
LINC01565-201ENST00000356020 FRAT2O75474 233 aaPredicted RBP19.89■□□□□ 0.78
LINC01565-201ENST00000356020 RAPGEF3O95398 923 aa19.89■□□□□ 0.78
LINC01565-201ENST00000356020 SLC52A1Q9NWF4 448 aa19.89■□□□□ 0.78
LINC01565-201ENST00000356020 SAFB2Q14151 953 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC01565-201ENST00000356020 PLEKHF1Q96S99 279 aa19.89■□□□□ 0.77
LINC01565-201ENST00000356020 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
LINC01565-201ENST00000356020 DZIP1LQ8IYY4 767 aaKnown RBP19.88■□□□□ 0.77
LINC01565-201ENST00000356020 FTSJ3Q8IY81 847 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms