RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 DENND4BO75064 1496 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-202ENST00000355815 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
SREBF1-202ENST00000355815 PRKAR2BP31323 418 aa17.52■□□□□ 0.4
SREBF1-202ENST00000355815 DDX49Q9Y6V7 483 aaKnown RBP17.52■□□□□ 0.4
SREBF1-202ENST00000355815 IDI1Q13907 227 aa17.52■□□□□ 0.4
SREBF1-202ENST00000355815 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
SREBF1-202ENST00000355815 TARBP1Q13395 1621 aaKnown RBP17.52■□□□□ 0.4
SREBF1-202ENST00000355815 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.4
SREBF1-202ENST00000355815 RTF1Q92541 710 aaKnown RBP17.52■□□□□ 0.4
SREBF1-202ENST00000355815 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
SREBF1-202ENST00000355815 RBM10P98175 930 aaKnown RBP17.52■□□□□ 0.39
SREBF1-202ENST00000355815 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.39
SREBF1-202ENST00000355815 STAC3Q96MF2 364 aa17.52■□□□□ 0.39
SREBF1-202ENST00000355815 RALGAPBQ86X10 1494 aa17.52■□□□□ 0.39
SREBF1-202ENST00000355815 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
SREBF1-202ENST00000355815 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
SREBF1-202ENST00000355815 A0A0G2JS52 829 aa17.5■□□□□ 0.39
SREBF1-202ENST00000355815 FAM43AQ8N2R8 423 aa17.5■□□□□ 0.39
SREBF1-202ENST00000355815 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
SREBF1-202ENST00000355815 IGHDP01880 384 aa17.5■□□□□ 0.39
SREBF1-202ENST00000355815 COG3Q96JB2 828 aa17.5■□□□□ 0.39
SREBF1-202ENST00000355815 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-202ENST00000355815 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
SREBF1-202ENST00000355815 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
SREBF1-202ENST00000355815 PLEKHH1Q9ULM0 1364 aa17.49■□□□□ 0.39
SREBF1-202ENST00000355815 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
SREBF1-202ENST00000355815 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
SREBF1-202ENST00000355815 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
SREBF1-202ENST00000355815 GOLGA6L4A6NEF3 574 aa17.47■□□□□ 0.39
SREBF1-202ENST00000355815 AMPHP49418 695 aa17.46■□□□□ 0.39
SREBF1-202ENST00000355815 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
SREBF1-202ENST00000355815 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-202ENST00000355815 NOS1P29475 1434 aa17.45■□□□□ 0.38
SREBF1-202ENST00000355815 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
SREBF1-202ENST00000355815 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
SREBF1-202ENST00000355815 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
SREBF1-202ENST00000355815 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
SREBF1-202ENST00000355815 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
SREBF1-202ENST00000355815 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
SREBF1-202ENST00000355815 PDE3AQ14432 1141 aa17.44■□□□□ 0.38
SREBF1-202ENST00000355815 ADGRL1O94910 1474 aa17.43■□□□□ 0.38
SREBF1-202ENST00000355815 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-202ENST00000355815 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-202ENST00000355815 A2MP01023 1474 aa17.42■□□□□ 0.38
SREBF1-202ENST00000355815 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
SREBF1-202ENST00000355815 KCNJ4P48050 445 aa17.42■□□□□ 0.38
SREBF1-202ENST00000355815 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
SREBF1-202ENST00000355815 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
SREBF1-202ENST00000355815 NUP160Q12769 1436 aa17.41■□□□□ 0.38
SREBF1-202ENST00000355815 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
SREBF1-202ENST00000355815 FANCAO15360 1455 aa17.41■□□□□ 0.38
SREBF1-202ENST00000355815 PLCH2O75038 1416 aa17.41■□□□□ 0.38
SREBF1-202ENST00000355815 DDX11L8A8MPP1 907 aa17.4■□□□□ 0.38
SREBF1-202ENST00000355815 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.38
SREBF1-202ENST00000355815 MPNDQ8N594 471 aa17.39■□□□□ 0.37
SREBF1-202ENST00000355815 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
SREBF1-202ENST00000355815 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
SREBF1-202ENST00000355815 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
SREBF1-202ENST00000355815 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 RLBP1P12271 317 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 CD109Q6YHK3 1445 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 FGD1P98174 961 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 TMEM57Q8N5G2 664 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 PCDHB15Q9Y5E8 787 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
SREBF1-202ENST00000355815 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
SREBF1-202ENST00000355815 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
SREBF1-202ENST00000355815 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
SREBF1-202ENST00000355815 STK31Q9BXU1 1019 aa17.36■□□□□ 0.37
SREBF1-202ENST00000355815 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
SREBF1-202ENST00000355815 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
SREBF1-202ENST00000355815 NME9Q86XW9 330 aa17.36■□□□□ 0.37
SREBF1-202ENST00000355815 ITSN2Q9NZM3 1697 aa17.35■□□□□ 0.37
SREBF1-202ENST00000355815 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-202ENST00000355815 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
SREBF1-202ENST00000355815 UHRF1BP1Q6BDS2 1440 aa17.35■□□□□ 0.37
SREBF1-202ENST00000355815 TRAK2O60296 914 aa17.35■□□□□ 0.37
SREBF1-202ENST00000355815 ZNF771Q7L3S4 317 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-202ENST00000355815 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
SREBF1-202ENST00000355815 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
SREBF1-202ENST00000355815 CFAP65Q6ZU64 1925 aaKnown RBP17.35■□□□□ 0.37
SREBF1-202ENST00000355815 MBD5Q9P267 1494 aa17.35■□□□□ 0.37
SREBF1-202ENST00000355815 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
SREBF1-202ENST00000355815 ADGRL2O95490 1459 aa17.34■□□□□ 0.37
SREBF1-202ENST00000355815 SLC52A1Q9NWF4 448 aa17.34■□□□□ 0.37
SREBF1-202ENST00000355815 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
SREBF1-202ENST00000355815 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
SREBF1-202ENST00000355815 SEC24BO95487 1268 aa17.33■□□□□ 0.37
SREBF1-202ENST00000355815 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.37
SREBF1-202ENST00000355815 RILPL2Q969X0 211 aa17.33■□□□□ 0.36
SREBF1-202ENST00000355815 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-202ENST00000355815 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.36
SREBF1-202ENST00000355815 NCKAP5LQ9HCH0 1330 aa17.32■□□□□ 0.36
SREBF1-202ENST00000355815 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
SREBF1-202ENST00000355815 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
SREBF1-202ENST00000355815 TRIM27P14373 513 aa17.31■□□□□ 0.36
SREBF1-202ENST00000355815 GNAI1P63096 354 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms