RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 CAGE1Q8TC20 777 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 TSPYL1Q9H0U9 437 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 CCDC192P0DO97 292 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 PSMA5P28066 241 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 PDILTQ8N807 584 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.03
SYNCRIP-201ENST00000355238 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.03
SYNCRIP-201ENST00000355238 DIAPH1O60610 1272 aaKnown RBP15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 K7ELQ4 463 aaPredicted RBP15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 MSH5O43196 834 aa15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 TRDNQ13061 729 aa15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 GNAI1P63096 354 aa15.26■□□□□ 0.03
SYNCRIP-201ENST00000355238 EIF3JO75822 258 aaKnown RBP15.25■□□□□ 0.03
SYNCRIP-201ENST00000355238 SAFBQ15424 915 aaKnown RBP eCLIP15.25■□□□□ 0.03
SYNCRIP-201ENST00000355238 SMC2O95347 1197 aa15.25■□□□□ 0.03
SYNCRIP-201ENST00000355238 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
SYNCRIP-201ENST00000355238 NAP1L1P55209 391 aaKnown RBP15.25■□□□□ 0.03
SYNCRIP-201ENST00000355238 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
SYNCRIP-201ENST00000355238 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.039e-7■■■■□ 22.9
SYNCRIP-201ENST00000355238 NEK4P51957 841 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 KIF3BO15066 747 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 ERLIN1O75477 346 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 KIAA0754O94854 1291 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 MYO6Q9UM54 1294 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 NEXNQ0ZGT2 675 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 SMARCE1Q969G3 411 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 DEF6Q9H4E7 631 aa15.24■□□□□ 0.03
SYNCRIP-201ENST00000355238 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
SYNCRIP-201ENST00000355238 COG3Q96JB2 828 aa15.23■□□□□ 0.03
SYNCRIP-201ENST00000355238 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.22■□□□□ 0.03
SYNCRIP-201ENST00000355238 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
SYNCRIP-201ENST00000355238 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 15.3
SYNCRIP-201ENST00000355238 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
SYNCRIP-201ENST00000355238 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
SYNCRIP-201ENST00000355238 CCDC27Q2M243 656 aa15.21■□□□□ 0.03
SYNCRIP-201ENST00000355238 VPS53Q5VIR6 699 aa15.21■□□□□ 0.03
SYNCRIP-201ENST00000355238 PRM3Q9NNZ6 103 aa15.21■□□□□ 0.03
SYNCRIP-201ENST00000355238 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
SYNCRIP-201ENST00000355238 CT47B1P0C2W7 299 aaPredicted RBP15.21■□□□□ 0.03
SYNCRIP-201ENST00000355238 FILIP1LQ4L180 1135 aa15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 FIBPO43427 364 aa15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
SYNCRIP-201ENST00000355238 FKBP5Q13451 457 aaPredicted RBP15.19■□□□□ 0.02
SYNCRIP-201ENST00000355238 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
SYNCRIP-201ENST00000355238 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
SYNCRIP-201ENST00000355238 NFXL1Q6ZNB6 911 aa15.19■□□□□ 0.02
SYNCRIP-201ENST00000355238 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
SYNCRIP-201ENST00000355238 TNMDQ9H2S6 317 aa15.18■□□□□ 0.02
SYNCRIP-201ENST00000355238 ERICH2A1L162 156 aa15.18■□□□□ 0.02
SYNCRIP-201ENST00000355238 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 GOLGA6L7A0A1B0GV03 622 aa15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 KIF2AO00139 706 aaPredicted RBP15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 TEFQ10587 303 aa15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 MLECQ14165 292 aa15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 FOSBP53539 338 aa15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 RALYLQ86SE5 291 aaKnown RBP15.17■□□□□ 0.02
SYNCRIP-201ENST00000355238 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
SYNCRIP-201ENST00000355238 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
SYNCRIP-201ENST00000355238 TTLL5Q6EMB2 1281 aa15.16■□□□□ 0.02
SYNCRIP-201ENST00000355238 ERICH4A6NGS2 130 aa15.16■□□□□ 0.02
SYNCRIP-201ENST00000355238 GOLGA6L10A6NI86 522 aa15.16■□□□□ 0.02
SYNCRIP-201ENST00000355238 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
SYNCRIP-201ENST00000355238 HIP1O00291 1037 aa15.15■□□□□ 0.02
SYNCRIP-201ENST00000355238 KRT85P78386 507 aa15.15■□□□□ 0.02
SYNCRIP-201ENST00000355238 OFD1O75665 1012 aa15.15■□□□□ 0.02
SYNCRIP-201ENST00000355238 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
SYNCRIP-201ENST00000355238 CBFA2T2O43439 604 aa15.15■□□□□ 0.02
SYNCRIP-201ENST00000355238 AMOTL1Q8IY63 956 aa15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 FMNL2Q96PY5 1086 aa15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 SERPINC1P01008 464 aa15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 EIF2S2P20042 333 aaKnown RBP15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 ZMYND15Q9H091 742 aa15.14■□□□□ 0.01
SYNCRIP-201ENST00000355238 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 XBP1P17861 261 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 CBX1P83916 185 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 GNAI3P08754 354 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 PNISRQ8TF01 805 aaKnown RBP15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 MCM5P33992 734 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 UBTFL1P0CB47 393 aaPredicted RBP15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 ZRSR2Q15696 482 aaKnown RBP15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 TMCO3Q6UWJ1 677 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 UBXN4Q92575 508 aa15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 CGNQ9P2M7 1197 aaKnown RBP15.13■□□□□ 0.01
SYNCRIP-201ENST00000355238 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms