RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
GABPA-201ENST00000354828 NAIPQ13075 1403 aa12.13□□□□□ -0.47
GABPA-201ENST00000354828 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
GABPA-201ENST00000354828 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
GABPA-201ENST00000354828 WDR97A6NE52 1622 aa12.13□□□□□ -0.47
GABPA-201ENST00000354828 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
GABPA-201ENST00000354828 NUDT16Q96DE0 195 aaKnown RBP12.13□□□□□ -0.47
GABPA-201ENST00000354828 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
GABPA-201ENST00000354828 E9PSI1 815 aa12.13□□□□□ -0.47
GABPA-201ENST00000354828 HSPA2P54652 639 aa12.13□□□□□ -0.47
GABPA-201ENST00000354828 CABP4P57796 275 aa12.12□□□□□ -0.47
GABPA-201ENST00000354828 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
GABPA-201ENST00000354828 GNAI1P63096 354 aa12.12□□□□□ -0.47
GABPA-201ENST00000354828 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
GABPA-201ENST00000354828 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
GABPA-201ENST00000354828 ABCC2Q92887 1545 aa12.12□□□□□ -0.47
GABPA-201ENST00000354828 NCOA1Q15788 1441 aa12.11□□□□□ -0.47
GABPA-201ENST00000354828 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
GABPA-201ENST00000354828 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
GABPA-201ENST00000354828 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 ZNF530Q6P9A1 599 aaPredicted RBP12.1□□□□□ -0.47
GABPA-201ENST00000354828 TNRQ92752 1358 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 PHF8Q9UPP1 1060 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 DHX29Q7Z478 1369 aaKnown RBP12.1□□□□□ -0.47
GABPA-201ENST00000354828 RAD21O60216 631 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
GABPA-201ENST00000354828 DISP1Q96F81 1524 aa12.09□□□□□ -0.47
GABPA-201ENST00000354828 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
GABPA-201ENST00000354828 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
GABPA-201ENST00000354828 SULT6B1Q6IMI4 303 aa12.09□□□□□ -0.47
GABPA-201ENST00000354828 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
GABPA-201ENST00000354828 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
GABPA-201ENST00000354828 CEP170Q5SW79 1584 aa12.08□□□□□ -0.48
GABPA-201ENST00000354828 HSP90B1P14625 803 aaKnown RBP12.08□□□□□ -0.48
GABPA-201ENST00000354828 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
GABPA-201ENST00000354828 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
GABPA-201ENST00000354828 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
GABPA-201ENST00000354828 CTDP1Q9Y5B0 961 aaPredicted RBP12.07□□□□□ -0.48
GABPA-201ENST00000354828 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
GABPA-201ENST00000354828 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
GABPA-201ENST00000354828 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
GABPA-201ENST00000354828 MSH6P52701 1360 aa12.05□□□□□ -0.48
GABPA-201ENST00000354828 CCDC7Q96M83 1385 aa12.05□□□□□ -0.48
GABPA-201ENST00000354828 PLIN1O60240 522 aa12.05□□□□□ -0.48
GABPA-201ENST00000354828 LRRFIP1Q32MZ4 808 aaKnown RBP12.05□□□□□ -0.48
GABPA-201ENST00000354828 RILPL2Q969X0 211 aa12.05□□□□□ -0.48
GABPA-201ENST00000354828 ZNF518AQ6AHZ1 1483 aa12.05□□□□□ -0.48
GABPA-201ENST00000354828 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
GABPA-201ENST00000354828 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
GABPA-201ENST00000354828 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
GABPA-201ENST00000354828 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
GABPA-201ENST00000354828 CWC22Q9HCG8 908 aaKnown RBP12.04□□□□□ -0.48
GABPA-201ENST00000354828 IFIT2P09913 472 aaKnown RBP12.04□□□□□ -0.48
GABPA-201ENST00000354828 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
GABPA-201ENST00000354828 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
GABPA-201ENST00000354828 APPP05067 770 aa12.03□□□□□ -0.48
GABPA-201ENST00000354828 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
GABPA-201ENST00000354828 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
GABPA-201ENST00000354828 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
GABPA-201ENST00000354828 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.48
GABPA-201ENST00000354828 MARCH6O60337 910 aa12.02□□□□□ -0.49
GABPA-201ENST00000354828 NBPF8Q3BBV2 869 aa12.02□□□□□ -0.49
GABPA-201ENST00000354828 CCDC30Q5VVM6 783 aa12.02□□□□□ -0.49
GABPA-201ENST00000354828 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
GABPA-201ENST00000354828 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
GABPA-201ENST00000354828 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
GABPA-201ENST00000354828 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
GABPA-201ENST00000354828 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
GABPA-201ENST00000354828 A2MP01023 1474 aa12.01□□□□□ -0.49
GABPA-201ENST00000354828 ADGRF5Q8IZF2 1346 aa12□□□□□ -0.49
GABPA-201ENST00000354828 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
GABPA-201ENST00000354828 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
GABPA-201ENST00000354828 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
GABPA-201ENST00000354828 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
GABPA-201ENST00000354828 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
GABPA-201ENST00000354828 PPP2R1AP30153 589 aa12□□□□□ -0.49
GABPA-201ENST00000354828 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
GABPA-201ENST00000354828 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
GABPA-201ENST00000354828 RASSF8Q8NHQ8 419 aa12□□□□□ -0.49
GABPA-201ENST00000354828 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
GABPA-201ENST00000354828 PNISRQ8TF01 805 aaKnown RBP11.99□□□□□ -0.49
GABPA-201ENST00000354828 KDM5BQ9UGL1 1544 aa11.99□□□□□ -0.49
GABPA-201ENST00000354828 EXOC5O00471 708 aa11.99□□□□□ -0.49
GABPA-201ENST00000354828 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
GABPA-201ENST00000354828 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
GABPA-201ENST00000354828 UBTFL1P0CB47 393 aaPredicted RBP11.99□□□□□ -0.49
GABPA-201ENST00000354828 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 DDX19BQ9UMR2 479 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 UHRF1BP1LA0JNW5 1464 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 CNTLNQ9NXG0 1405 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 TMOD3Q9NYL9 352 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 ADAMTS8Q9UP79 889 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 DHX16O60231 1041 aaKnown RBP11.98□□□□□ -0.49
GABPA-201ENST00000354828 MYL6BP14649 208 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
GABPA-201ENST00000354828 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
GABPA-201ENST00000354828 KIF16BQ96L93 1317 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms