RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 JCADQ9P266 1359 aa29.35■■■□□ 2.29
HCFC1R1-202ENST00000354679 NHSL1Q5SYE7 1610 aa29.32■■■□□ 2.28
HCFC1R1-202ENST00000354679 DLC1Q96QB1 1528 aa29.32■■■□□ 2.28
HCFC1R1-202ENST00000354679 PRAM1Q96QH2 718 aa29.3■■■□□ 2.28
HCFC1R1-202ENST00000354679 ORAI2Q96SN7 254 aa29.29■■■□□ 2.28
HCFC1R1-202ENST00000354679 SIN3AQ96ST3 1273 aa29.29■■■□□ 2.28
HCFC1R1-202ENST00000354679 PHF23Q9BUL5 403 aaPredicted RBP29.29■■■□□ 2.28
HCFC1R1-202ENST00000354679 ILDR2Q71H61 639 aa29.27■■■□□ 2.28
HCFC1R1-202ENST00000354679 TRAK1Q9UPV9 953 aa29.27■■■□□ 2.28
HCFC1R1-202ENST00000354679 SAFB2Q14151 953 aaKnown RBP eCLIP29.26■■■□□ 2.27
HCFC1R1-202ENST00000354679 DDX17Q92841 729 aaKnown RBP29.26■■■□□ 2.27
HCFC1R1-202ENST00000354679 POGKQ9P215 609 aa29.26■■■□□ 2.27
HCFC1R1-202ENST00000354679 FMN2Q9NZ56 1722 aa29.23■■■□□ 2.27
HCFC1R1-202ENST00000354679 NEUROD1Q13562 356 aa29.23■■■□□ 2.27
HCFC1R1-202ENST00000354679 SHPRHQ149N8 1683 aa29.23■■■□□ 2.27
HCFC1R1-202ENST00000354679 NUTM2FA1L443 756 aa29.22■■■□□ 2.27
HCFC1R1-202ENST00000354679 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
HCFC1R1-202ENST00000354679 L3MBTL2Q969R5 705 aa29.22■■■□□ 2.27
HCFC1R1-202ENST00000354679 KIAA1210Q9ULL0 1709 aa29.22■■■□□ 2.27
HCFC1R1-202ENST00000354679 SPATA31A6Q5VVP1 1343 aa29.2■■■□□ 2.27
HCFC1R1-202ENST00000354679 LRRC59Q96AG4 307 aaKnown RBP29.2■■■□□ 2.26
HCFC1R1-202ENST00000354679 ADGRB2O60241 1585 aa29.17■■■□□ 2.26
HCFC1R1-202ENST00000354679 SOS2Q07890 1332 aaPredicted RBP29.16■■■□□ 2.26
HCFC1R1-202ENST00000354679 ARHGEF28Q8N1W1 1705 aaKnown RBP29.15■■■□□ 2.26
HCFC1R1-202ENST00000354679 LRP6O75581 1613 aa29.14■■■□□ 2.26
HCFC1R1-202ENST00000354679 NBPF1Q3BBV0 1214 aa29.14■■■□□ 2.26
HCFC1R1-202ENST00000354679 NPHP3Q7Z494 1330 aa29.14■■■□□ 2.25
HCFC1R1-202ENST00000354679 HIRIP3Q9BW71 556 aaPredicted RBP29.13■■■□□ 2.25
HCFC1R1-202ENST00000354679 MINK1Q8N4C8 1332 aaPredicted RBP29.13■■■□□ 2.25
HCFC1R1-202ENST00000354679 PNPLA6Q8IY17 1366 aa29.12■■■□□ 2.25
HCFC1R1-202ENST00000354679 RGS17Q9UGC6 210 aaPredicted RBP29.11■■■□□ 2.25
HCFC1R1-202ENST00000354679 KIF1AQ12756 1690 aa29.1■■■□□ 2.25
HCFC1R1-202ENST00000354679 FOXO3O43524 673 aa29.1■■■□□ 2.25
HCFC1R1-202ENST00000354679 PXDNQ92626 1479 aa29.09■■■□□ 2.25
HCFC1R1-202ENST00000354679 NUTM2BA6NNL0 878 aaPredicted RBP29.08■■■□□ 2.25
HCFC1R1-202ENST00000354679 NUTM2EB1AL46 878 aaPredicted RBP29.08■■■□□ 2.25
HCFC1R1-202ENST00000354679 MEX3CQ5U5Q3 659 aaKnown RBP29.08■■■□□ 2.25
HCFC1R1-202ENST00000354679 NUTM2AQ8IVF1 878 aaPredicted RBP29.08■■■□□ 2.25
HCFC1R1-202ENST00000354679 ANKARQ7Z5J8 1434 aa29.08■■■□□ 2.25
HCFC1R1-202ENST00000354679 RGPD8O14715 1765 aaPredicted RBP29.07■■■□□ 2.24
HCFC1R1-202ENST00000354679 EIF3AQ14152 1382 aaKnown RBP29.06■■■□□ 2.24
HCFC1R1-202ENST00000354679 XPCQ01831 940 aaPredicted RBP29.06■■■□□ 2.24
HCFC1R1-202ENST00000354679 PHF8Q9UPP1 1060 aa29.06■■■□□ 2.24
HCFC1R1-202ENST00000354679 WASLO00401 505 aaPredicted RBP29.05■■■□□ 2.24
HCFC1R1-202ENST00000354679 USP32Q8NFA0 1604 aa29.05■■■□□ 2.24
HCFC1R1-202ENST00000354679 TRPM1Q7Z4N2 1603 aa29.03■■■□□ 2.24
HCFC1R1-202ENST00000354679 TULP4Q9NRJ4 1543 aa29.03■■■□□ 2.24
HCFC1R1-202ENST00000354679 TONSLQ96HA7 1378 aa29.01■■■□□ 2.24
HCFC1R1-202ENST00000354679 PRR36Q9H6K5 1346 aa28.99■■■□□ 2.23
HCFC1R1-202ENST00000354679 SOCS7O14512 581 aa28.98■■■□□ 2.23
HCFC1R1-202ENST00000354679 POTEAQ6S8J7 498 aa28.98■■■□□ 2.23
HCFC1R1-202ENST00000354679 KRT28Q7Z3Y7 464 aa28.98■■■□□ 2.23
HCFC1R1-202ENST00000354679 COL22A1Q8NFW1 1626 aaPredicted RBP28.98■■■□□ 2.23
HCFC1R1-202ENST00000354679 PMFBP1Q8TBY8 1022 aa28.97■■■□□ 2.23
HCFC1R1-202ENST00000354679 ROCK2O75116 1388 aaKnown RBP28.97■■■□□ 2.23
HCFC1R1-202ENST00000354679 CENPJQ9HC77 1338 aaPredicted RBP28.96■■■□□ 2.23
HCFC1R1-202ENST00000354679 NBPF8Q3BBV2 869 aa28.96■■■□□ 2.23
HCFC1R1-202ENST00000354679 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.22
HCFC1R1-202ENST00000354679 PSME1Q06323 249 aa28.94■■■□□ 2.22
HCFC1R1-202ENST00000354679 SPATA31A3Q5VYP0 1347 aa28.94■■■□□ 2.22
HCFC1R1-202ENST00000354679 ATP7BP35670 1465 aa28.93■■■□□ 2.22
HCFC1R1-202ENST00000354679 CDK19Q9BWU1 502 aa28.93■■■□□ 2.22
HCFC1R1-202ENST00000354679 ZNF772Q68DY9 489 aaPredicted RBP28.92■■■□□ 2.22
HCFC1R1-202ENST00000354679 ADAMTS2O95450 1211 aa28.91■■■□□ 2.22
HCFC1R1-202ENST00000354679 NUDT16Q96DE0 195 aaKnown RBP28.91■■■□□ 2.22
HCFC1R1-202ENST00000354679 TNS3Q68CZ2 1445 aa28.9■■■□□ 2.22
HCFC1R1-202ENST00000354679 C8orf37Q96NL8 207 aa28.9■■■□□ 2.22
HCFC1R1-202ENST00000354679 AFF2P51816 1311 aa28.9■■■□□ 2.22
HCFC1R1-202ENST00000354679 SBNO1A3KN83 1393 aa28.89■■■□□ 2.22
HCFC1R1-202ENST00000354679 GPRASP1Q5JY77 1395 aa28.89■■■□□ 2.22
HCFC1R1-202ENST00000354679 QRICH2Q9H0J4 1663 aa28.89■■■□□ 2.21
HCFC1R1-202ENST00000354679 ITSN1Q15811 1721 aa28.89■■■□□ 2.21
HCFC1R1-202ENST00000354679 NGDNQ8NEJ9 315 aaKnown RBP28.85■■■□□ 2.21
HCFC1R1-202ENST00000354679 RALGAPBQ86X10 1494 aa28.85■■■□□ 2.21
HCFC1R1-202ENST00000354679 NGLY1Q96IV0 654 aa28.83■■■□□ 2.21
HCFC1R1-202ENST00000354679 TOPAZ1Q8N9V7 1692 aa28.83■■■□□ 2.21
HCFC1R1-202ENST00000354679 SRPK2P78362 688 aaKnown RBP28.82■■■□□ 2.2
HCFC1R1-202ENST00000354679 LMOD2Q6P5Q4 547 aa28.82■■■□□ 2.2
HCFC1R1-202ENST00000354679 CCDC61Q9Y6R9 512 aa28.82■■■□□ 2.2
HCFC1R1-202ENST00000354679 ARHGEF10O15013 1369 aa28.82■■■□□ 2.2
HCFC1R1-202ENST00000354679 TRPM3Q9HCF6 1732 aaPredicted RBP28.82■■■□□ 2.2
HCFC1R1-202ENST00000354679 CARD11Q9BXL7 1154 aa28.81■■■□□ 2.2
HCFC1R1-202ENST00000354679 CABP2Q9NPB3 220 aa28.79■■■□□ 2.2
HCFC1R1-202ENST00000354679 MARF1Q9Y4F3 1742 aaKnown RBP28.77■■■□□ 2.2
HCFC1R1-202ENST00000354679 POLR3AO14802 1390 aaPredicted RBP28.76■■■□□ 2.2
HCFC1R1-202ENST00000354679 EVC2Q86UK5 1308 aa28.76■■■□□ 2.19
HCFC1R1-202ENST00000354679 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.19
HCFC1R1-202ENST00000354679 PLEKHG3A1L390 1219 aa28.76■■■□□ 2.19
HCFC1R1-202ENST00000354679 ACEP12821 1306 aa28.75■■■□□ 2.19
HCFC1R1-202ENST00000354679 ALS2Q96Q42 1657 aa28.75■■■□□ 2.19
HCFC1R1-202ENST00000354679 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
HCFC1R1-202ENST00000354679 PLEKHG5O94827 1062 aa28.74■■■□□ 2.19
HCFC1R1-202ENST00000354679 HAP1P54257 671 aaPredicted RBP28.74■■■□□ 2.19
HCFC1R1-202ENST00000354679 FNBP4Q8N3X1 1017 aaPredicted RBP28.74■■■□□ 2.19
HCFC1R1-202ENST00000354679 PPIP5K1Q6PFW1 1433 aa28.74■■■□□ 2.19
HCFC1R1-202ENST00000354679 PAK3O75914 559 aaPredicted RBP28.73■■■□□ 2.19
HCFC1R1-202ENST00000354679 RXRBP28702 533 aa28.73■■■□□ 2.19
HCFC1R1-202ENST00000354679 QTRT2Q9H974 415 aaKnown RBP28.73■■■□□ 2.19
HCFC1R1-202ENST00000354679 USP21Q9UK80 565 aa28.73■■■□□ 2.19
HCFC1R1-202ENST00000354679 ABCA3Q99758 1704 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms