RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 IQSEC2Q5JU85 1478 aa12.48□□□□□ -0.41
RPE-201ENST00000354506 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
RPE-201ENST00000354506 FRMPD1Q5SYB0 1578 aa12.48□□□□□ -0.41
RPE-201ENST00000354506 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
RPE-201ENST00000354506 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
RPE-201ENST00000354506 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
RPE-201ENST00000354506 RRP7AQ9Y3A4 280 aaKnown RBP12.47□□□□□ -0.41
RPE-201ENST00000354506 QRICH2Q9H0J4 1663 aa12.47□□□□□ -0.41
RPE-201ENST00000354506 ASXL2Q76L83 1435 aa12.46□□□□□ -0.41
RPE-201ENST00000354506 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
RPE-201ENST00000354506 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.42
RPE-201ENST00000354506 NOS1P29475 1434 aa12.46□□□□□ -0.42
RPE-201ENST00000354506 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.42
RPE-201ENST00000354506 WWC1Q8IX03 1113 aa12.46□□□□□ -0.42
RPE-201ENST00000354506 NPATQ14207 1427 aa12.45□□□□□ -0.42
RPE-201ENST00000354506 PDE3AQ14432 1141 aa12.45□□□□□ -0.42
RPE-201ENST00000354506 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
RPE-201ENST00000354506 IGHDP01880 384 aa12.44□□□□□ -0.42
RPE-201ENST00000354506 MLH3Q9UHC1 1453 aa12.44□□□□□ -0.42
RPE-201ENST00000354506 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
RPE-201ENST00000354506 CENPJQ9HC77 1338 aaPredicted RBP12.44□□□□□ -0.42
RPE-201ENST00000354506 PIK3C2BO00750 1634 aa12.43□□□□□ -0.42
RPE-201ENST00000354506 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
RPE-201ENST00000354506 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
RPE-201ENST00000354506 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
RPE-201ENST00000354506 GSE1Q14687 1217 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 HECW2Q9P2P5 1572 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 SEC24BO95487 1268 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 TNNQ9UQP3 1299 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 SIGLEC1Q9BZZ2 1709 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
RPE-201ENST00000354506 USP19O94966 1318 aa12.41□□□□□ -0.42
RPE-201ENST00000354506 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
RPE-201ENST00000354506 CGNL1Q0VF96 1302 aa12.41□□□□□ -0.42
RPE-201ENST00000354506 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.42
RPE-201ENST00000354506 POGZQ7Z3K3 1410 aa12.4□□□□□ -0.42
RPE-201ENST00000354506 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
RPE-201ENST00000354506 ABCC3O15438 1527 aa12.4□□□□□ -0.42
RPE-201ENST00000354506 CFAP74Q9C0B2 1584 aa12.4□□□□□ -0.42
RPE-201ENST00000354506 RUNDC1Q96C34 613 aa12.4□□□□□ -0.42
RPE-201ENST00000354506 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
RPE-201ENST00000354506 GLI2P10070 1586 aa12.39□□□□□ -0.43
RPE-201ENST00000354506 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
RPE-201ENST00000354506 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
RPE-201ENST00000354506 TULP4Q9NRJ4 1543 aa12.39□□□□□ -0.43
RPE-201ENST00000354506 CAMSAP1Q5T5Y3 1602 aa12.38□□□□□ -0.43
RPE-201ENST00000354506 NEXMIFQ5QGS0 1516 aa12.38□□□□□ -0.43
RPE-201ENST00000354506 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
RPE-201ENST00000354506 AAMPQ13685 434 aa12.37□□□□□ -0.43
RPE-201ENST00000354506 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
RPE-201ENST00000354506 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
RPE-201ENST00000354506 NLRP1Q9C000 1473 aa12.37□□□□□ -0.43
RPE-201ENST00000354506 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
RPE-201ENST00000354506 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
RPE-201ENST00000354506 POGKQ9P215 609 aa12.36□□□□□ -0.43
RPE-201ENST00000354506 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
RPE-201ENST00000354506 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
RPE-201ENST00000354506 NSD2O96028 1365 aa12.36□□□□□ -0.43
RPE-201ENST00000354506 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
RPE-201ENST00000354506 CFAP65Q6ZU64 1925 aaKnown RBP12.35□□□□□ -0.43
RPE-201ENST00000354506 MTHFSP49914 203 aa12.34□□□□□ -0.43
RPE-201ENST00000354506 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
RPE-201ENST00000354506 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
RPE-201ENST00000354506 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
RPE-201ENST00000354506 CD109Q6YHK3 1445 aa12.33□□□□□ -0.43
RPE-201ENST00000354506 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.43
RPE-201ENST00000354506 RLBP1P12271 317 aa12.33□□□□□ -0.44
RPE-201ENST00000354506 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
RPE-201ENST00000354506 SAFB2Q14151 953 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPE-201ENST00000354506 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
RPE-201ENST00000354506 PLEKHF1Q96S99 279 aa12.32□□□□□ -0.44
RPE-201ENST00000354506 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
RPE-201ENST00000354506 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
RPE-201ENST00000354506 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
RPE-201ENST00000354506 ABCC11Q96J66 1382 aa12.3□□□□□ -0.44
RPE-201ENST00000354506 DIP2CQ9Y2E4 1556 aa12.3□□□□□ -0.44
RPE-201ENST00000354506 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
RPE-201ENST00000354506 MED14O60244 1454 aa12.3□□□□□ -0.44
RPE-201ENST00000354506 CD163L1Q9NR16 1453 aa12.3□□□□□ -0.44
RPE-201ENST00000354506 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
RPE-201ENST00000354506 GGT6Q6P531 493 aa12.29□□□□□ -0.44
RPE-201ENST00000354506 NEO1Q92859 1461 aa12.29□□□□□ -0.44
RPE-201ENST00000354506 CT47B1P0C2W7 299 aaPredicted RBP12.28□□□□□ -0.44
RPE-201ENST00000354506 PTPRMP28827 1452 aa12.28□□□□□ -0.44
RPE-201ENST00000354506 TMEM131LA2VDJ0 1609 aa12.28□□□□□ -0.44
RPE-201ENST00000354506 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
RPE-201ENST00000354506 RICTORQ6R327 1708 aa12.27□□□□□ -0.44
RPE-201ENST00000354506 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
RPE-201ENST00000354506 MYH16Q9H6N6 1097 aa12.27□□□□□ -0.45
RPE-201ENST00000354506 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
RPE-201ENST00000354506 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
RPE-201ENST00000354506 PNPLA6Q8IY17 1366 aa12.26□□□□□ -0.45
RPE-201ENST00000354506 MVPQ14764 893 aaKnown RBP12.26□□□□□ -0.45
RPE-201ENST00000354506 ANTXR1Q9H6X2 564 aa12.26□□□□□ -0.45
RPE-201ENST00000354506 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
RPE-201ENST00000354506 IDI1Q13907 227 aa12.25□□□□□ -0.45
RPE-201ENST00000354506 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms