RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
DNMT3B-204ENST00000353855 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 ERBINQ96RT1 1412 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 GGT6Q6P531 493 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 NRDCO43847 1150 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 NEK4P51957 841 aa17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 ABCC5O15440 1437 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 HMMRO75330 724 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 RABEP1Q15276 862 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
DNMT3B-204ENST00000353855 DIAPH3Q9NSV4 1193 aa17.35■□□□□ 0.37
DNMT3B-204ENST00000353855 MBD3O95983 291 aa17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.37
DNMT3B-204ENST00000353855 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
DNMT3B-204ENST00000353855 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.36
DNMT3B-204ENST00000353855 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 CCDC27Q2M243 656 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 RLBP1P12271 317 aa17.31■□□□□ 0.36
DNMT3B-204ENST00000353855 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
DNMT3B-204ENST00000353855 NPHP1O15259 732 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 OFD1O75665 1012 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 WDR63Q8IWG1 891 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 HMOX1P09601 288 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 FIBPO43427 364 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 PDCL2Q8N4E4 241 aa17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.35
DNMT3B-204ENST00000353855 IGSF3O75054 1194 aa17.27■□□□□ 0.35
DNMT3B-204ENST00000353855 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.35
DNMT3B-204ENST00000353855 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 GOLGA6L19H0YKK7 550 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 TRIM27P14373 513 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 DYNC1I1O14576 645 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 USP25Q9UHP3 1055 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 BECN2A8MW95 431 aa17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 PLB1Q6P1J6 1458 aa17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 TPD52L1Q16890 204 aaPredicted RBP17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 CABP2Q9NPB3 220 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms