RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NFKBIBQ15653 356 aa31.7■■■□□ 2.67
CPNE1-202ENST00000352393 MORC1Q86VD1 984 aa31.7■■■□□ 2.67
CPNE1-202ENST00000352393 DAXXQ9UER7 740 aaPredicted RBP31.7■■■□□ 2.67
CPNE1-202ENST00000352393 C14orf93Q9H972 538 aaKnown RBP31.7■■■□□ 2.66
CPNE1-202ENST00000352393 CLUAP1Q96AJ1 413 aa31.69■■■□□ 2.66
CPNE1-202ENST00000352393 PHF23Q9BUL5 403 aaPredicted RBP31.69■■■□□ 2.66
CPNE1-202ENST00000352393 RUNDC1Q96C34 613 aa31.68■■■□□ 2.66
CPNE1-202ENST00000352393 CFAP74Q9C0B2 1584 aa31.67■■■□□ 2.66
CPNE1-202ENST00000352393 TRAK1Q9UPV9 953 aa31.67■■■□□ 2.66
CPNE1-202ENST00000352393 CFAP65Q6ZU64 1925 aaKnown RBP31.66■■■□□ 2.66
CPNE1-202ENST00000352393 GLI2P10070 1586 aa31.65■■■□□ 2.66
CPNE1-202ENST00000352393 ARHGEF28Q8N1W1 1705 aaKnown RBP31.65■■■□□ 2.66
CPNE1-202ENST00000352393 PANK1Q8TE04 598 aa31.65■■■□□ 2.66
CPNE1-202ENST00000352393 SLC12A5Q9H2X9 1139 aa31.65■■■□□ 2.66
CPNE1-202ENST00000352393 MAPK8IP3Q9UPT6 1336 aa31.64■■■□□ 2.66
CPNE1-202ENST00000352393 POGZQ7Z3K3 1410 aa31.64■■■□□ 2.65
CPNE1-202ENST00000352393 CANXP27824 592 aaKnown RBP31.63■■■□□ 2.65
CPNE1-202ENST00000352393 COG6Q9Y2V7 657 aa31.63■■■□□ 2.65
CPNE1-202ENST00000352393 MLH3Q9UHC1 1453 aa31.62■■■□□ 2.65
CPNE1-202ENST00000352393 CHGAP10645 457 aaKnown RBP31.62■■■□□ 2.65
CPNE1-202ENST00000352393 ABCC3O15438 1527 aa31.62■■■□□ 2.65
CPNE1-202ENST00000352393 CAMSAP1Q5T5Y3 1602 aa31.61■■■□□ 2.65
CPNE1-202ENST00000352393 RPGRIP1LQ68CZ1 1315 aa31.61■■■□□ 2.65
CPNE1-202ENST00000352393 TULP4Q9NRJ4 1543 aa31.61■■■□□ 2.65
CPNE1-202ENST00000352393 RARSP54136 660 aaKnown RBP31.61■■■□□ 2.65
CPNE1-202ENST00000352393 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
CPNE1-202ENST00000352393 TCP11L2Q8N4U5 519 aa31.61■■■□□ 2.65
CPNE1-202ENST00000352393 USP19O94966 1318 aa31.6■■■□□ 2.65
CPNE1-202ENST00000352393 WDR63Q8IWG1 891 aa31.6■■■□□ 2.65
CPNE1-202ENST00000352393 ADGRB2O60241 1585 aa31.6■■■□□ 2.65
CPNE1-202ENST00000352393 PIK3C2BO00750 1634 aa31.59■■■□□ 2.65
CPNE1-202ENST00000352393 SIGLEC1Q9BZZ2 1709 aa31.58■■■□□ 2.65
CPNE1-202ENST00000352393 TNNT2P45379 298 aaPredicted RBP31.58■■■□□ 2.65
CPNE1-202ENST00000352393 AAMPQ13685 434 aa31.58■■■□□ 2.65
CPNE1-202ENST00000352393 RRP7AQ9Y3A4 280 aaKnown RBP31.58■■■□□ 2.65
CPNE1-202ENST00000352393 CCDC27Q2M243 656 aa31.58■■■□□ 2.65
CPNE1-202ENST00000352393 GSE1Q14687 1217 aa31.57■■■□□ 2.64
CPNE1-202ENST00000352393 NSD2O96028 1365 aa31.56■■■□□ 2.64
CPNE1-202ENST00000352393 NLRP1Q9C000 1473 aa31.56■■■□□ 2.64
CPNE1-202ENST00000352393 NEUROD2Q15784 382 aa31.55■■■□□ 2.64
CPNE1-202ENST00000352393 PUS7Q96PZ0 661 aaKnown RBP31.55■■■□□ 2.64
CPNE1-202ENST00000352393 NCBP3Q53F19 620 aaKnown RBP31.55■■■□□ 2.64
CPNE1-202ENST00000352393 TMEM132EQ6IEE7 984 aa31.55■■■□□ 2.64
CPNE1-202ENST00000352393 NEXMIFQ5QGS0 1516 aa31.54■■■□□ 2.64
CPNE1-202ENST00000352393 MTHFSP49914 203 aa31.54■■■□□ 2.64
CPNE1-202ENST00000352393 IL27Q8NEV9 243 aa31.54■■■□□ 2.64
CPNE1-202ENST00000352393 FRAT1Q92837 279 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-202ENST00000352393 ZMYM3Q14202 1370 aa31.54■■■□□ 2.64
CPNE1-202ENST00000352393 ANKRD36BQ8N2N9 1353 aa31.54■■■□□ 2.64
CPNE1-202ENST00000352393 CFAP53Q96M91 514 aa31.53■■■□□ 2.64
CPNE1-202ENST00000352393 NPM1P06748 294 aaKnown RBP eCLIP31.52■■■□□ 2.64
CPNE1-202ENST00000352393 PMFBP1Q8TBY8 1022 aa31.51■■■□□ 2.64
CPNE1-202ENST00000352393 RLBP1P12271 317 aa31.5■■■□□ 2.63
CPNE1-202ENST00000352393 EVC2Q86UK5 1308 aa31.48■■■□□ 2.63
CPNE1-202ENST00000352393 GGT6Q6P531 493 aa31.47■■■□□ 2.63
CPNE1-202ENST00000352393 SEC24BO95487 1268 aa31.46■■■□□ 2.63
CPNE1-202ENST00000352393 TNNQ9UQP3 1299 aa31.46■■■□□ 2.63
CPNE1-202ENST00000352393 PCDHB15Q9Y5E8 787 aa31.46■■■□□ 2.63
CPNE1-202ENST00000352393 CD109Q6YHK3 1445 aa31.46■■■□□ 2.63
CPNE1-202ENST00000352393 MYH16Q9H6N6 1097 aa31.44■■■□□ 2.62
CPNE1-202ENST00000352393 FRAT2O75474 233 aaPredicted RBP31.43■■■□□ 2.62
CPNE1-202ENST00000352393 ANKRD26Q9UPS8 1709 aa31.41■■■□□ 2.62
CPNE1-202ENST00000352393 BCL2L13Q9BXK5 485 aa31.41■■■□□ 2.62
CPNE1-202ENST00000352393 ABCC11Q96J66 1382 aa31.39■■■□□ 2.62
CPNE1-202ENST00000352393 COL3A1P02461 1466 aaPredicted RBP31.39■■■□□ 2.62
CPNE1-202ENST00000352393 VGFO15240 615 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-202ENST00000352393 PDZRN3Q9UPQ7 1066 aa31.37■■■□□ 2.61
CPNE1-202ENST00000352393 U2AF1L5P0DN76 240 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-202ENST00000352393 U2AF1Q01081 240 aaKnown RBP eCLIP31.37■■■□□ 2.616e-11■■□□□ 12.7
CPNE1-202ENST00000352393 DIP2CQ9Y2E4 1556 aa31.37■■■□□ 2.61
CPNE1-202ENST00000352393 ZFYVE9O95405 1425 aa31.35■■■□□ 2.61
CPNE1-202ENST00000352393 ARHGAP31Q2M1Z3 1444 aa31.35■■■□□ 2.61
CPNE1-202ENST00000352393 A0A1W2PP64 1363 aa31.35■■■□□ 2.61
CPNE1-202ENST00000352393 BECN1Q14457 450 aa31.35■■■□□ 2.61
CPNE1-202ENST00000352393 MVPQ14764 893 aaKnown RBP31.35■■■□□ 2.61
CPNE1-202ENST00000352393 RWDD1Q9H446 243 aaPredicted RBP31.35■■■□□ 2.61
CPNE1-202ENST00000352393 CT47B1P0C2W7 299 aaPredicted RBP31.34■■■□□ 2.61
CPNE1-202ENST00000352393 CLTCQ00610 1675 aaKnown RBP31.34■■■□□ 2.61
CPNE1-202ENST00000352393 CABP2Q9NPB3 220 aa31.33■■■□□ 2.61
CPNE1-202ENST00000352393 ZKSCAN2Q63HK3 967 aa31.31■■■□□ 2.6
CPNE1-202ENST00000352393 MYO5BQ9ULV0 1848 aa31.31■■■□□ 2.6
CPNE1-202ENST00000352393 NUTM2DQ5VT03 806 aaPredicted RBP31.31■■■□□ 2.6
CPNE1-202ENST00000352393 TBC1D32Q96NH3 1257 aa31.31■■■□□ 2.6
CPNE1-202ENST00000352393 BRPF3Q9ULD4 1205 aa31.3■■■□□ 2.6
CPNE1-202ENST00000352393 NEO1Q92859 1461 aa31.3■■■□□ 2.6
CPNE1-202ENST00000352393 MED14O60244 1454 aa31.3■■■□□ 2.6
CPNE1-202ENST00000352393 PLEKHF1Q96S99 279 aa31.29■■■□□ 2.6
CPNE1-202ENST00000352393 PTPRMP28827 1452 aa31.28■■■□□ 2.6
CPNE1-202ENST00000352393 DZIP1LQ8IYY4 767 aaKnown RBP31.27■■■□□ 2.6
CPNE1-202ENST00000352393 UPF2Q9HAU5 1272 aaKnown RBP31.27■■■□□ 2.6
CPNE1-202ENST00000352393 RTN4Q9NQC3 1192 aaKnown RBP31.27■■■□□ 2.6
CPNE1-202ENST00000352393 TSR2Q969E8 191 aaKnown RBP31.25■■■□□ 2.59
CPNE1-202ENST00000352393 CD163L1Q9NR16 1453 aa31.24■■■□□ 2.59
CPNE1-202ENST00000352393 FTSJ3Q8IY81 847 aaKnown RBP31.24■■■□□ 2.59
CPNE1-202ENST00000352393 TMEM131LA2VDJ0 1609 aa31.24■■■□□ 2.59
CPNE1-202ENST00000352393 TMPOP42166 694 aaKnown RBP31.23■■■□□ 2.59
CPNE1-202ENST00000352393 ANTXR1Q9H6X2 564 aa31.23■■■□□ 2.59
CPNE1-202ENST00000352393 TRIM35Q9UPQ4 493 aa31.23■■■□□ 2.59
CPNE1-202ENST00000352393 RICTORQ6R327 1708 aa31.23■■■□□ 2.59
CPNE1-202ENST00000352393 PREX1Q8TCU6 1659 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms