RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RILPL2Q969X0 211 aa17.11■□□□□ 0.33
SMC6-201ENST00000351948 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
SMC6-201ENST00000351948 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
SMC6-201ENST00000351948 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SMC6-201ENST00000351948 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
SMC6-201ENST00000351948 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
SMC6-201ENST00000351948 GPATCH3Q96I76 525 aa17.1■□□□□ 0.33
SMC6-201ENST00000351948 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
SMC6-201ENST00000351948 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
SMC6-201ENST00000351948 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
SMC6-201ENST00000351948 G3V3G9 751 aa17.09■□□□□ 0.33
SMC6-201ENST00000351948 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
SMC6-201ENST00000351948 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.33
SMC6-201ENST00000351948 PLCH2O75038 1416 aa17.08■□□□□ 0.32
SMC6-201ENST00000351948 FOXO3O43524 673 aa17.08■□□□□ 0.32
SMC6-201ENST00000351948 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.32
SMC6-201ENST00000351948 NOS1P29475 1434 aa17.08■□□□□ 0.32
SMC6-201ENST00000351948 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SMC6-201ENST00000351948 TRAPPC8Q9Y2L5 1435 aa17.07■□□□□ 0.32
SMC6-201ENST00000351948 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
SMC6-201ENST00000351948 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
SMC6-201ENST00000351948 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
SMC6-201ENST00000351948 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
SMC6-201ENST00000351948 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
SMC6-201ENST00000351948 GOLGA6L4A6NEF3 574 aa17.05■□□□□ 0.32
SMC6-201ENST00000351948 NME9Q86XW9 330 aa17.05■□□□□ 0.32
SMC6-201ENST00000351948 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
SMC6-201ENST00000351948 DDX19BQ9UMR2 479 aa17.05■□□□□ 0.32
SMC6-201ENST00000351948 PNISRQ8TF01 805 aaKnown RBP17.05■□□□□ 0.32
SMC6-201ENST00000351948 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
SMC6-201ENST00000351948 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
SMC6-201ENST00000351948 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
SMC6-201ENST00000351948 RIC3Q7Z5B4 369 aa17.04■□□□□ 0.32
SMC6-201ENST00000351948 KIAA0556O60303 1618 aa17.04■□□□□ 0.32
SMC6-201ENST00000351948 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
SMC6-201ENST00000351948 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
SMC6-201ENST00000351948 TRIM44Q96DX7 344 aaPredicted RBP17.03■□□□□ 0.32
SMC6-201ENST00000351948 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
SMC6-201ENST00000351948 WDR7Q9Y4E6 1490 aa17.03■□□□□ 0.32
SMC6-201ENST00000351948 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
SMC6-201ENST00000351948 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
SMC6-201ENST00000351948 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
SMC6-201ENST00000351948 CFAP44Q96MT7 982 aa17.02■□□□□ 0.31
SMC6-201ENST00000351948 KDM5BQ9UGL1 1544 aa17.02■□□□□ 0.31
SMC6-201ENST00000351948 BCAR3O75815 825 aa17.01■□□□□ 0.31
SMC6-201ENST00000351948 GNL2Q13823 731 aaKnown RBP17.01■□□□□ 0.31
SMC6-201ENST00000351948 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
SMC6-201ENST00000351948 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
SMC6-201ENST00000351948 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
SMC6-201ENST00000351948 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
SMC6-201ENST00000351948 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
SMC6-201ENST00000351948 FBLN1P23142 703 aa17■□□□□ 0.31
SMC6-201ENST00000351948 ANP32EQ9BTT0 268 aa17■□□□□ 0.31
SMC6-201ENST00000351948 WDR62O43379 1518 aa17■□□□□ 0.31
SMC6-201ENST00000351948 KIF16BQ96L93 1317 aa17■□□□□ 0.31
SMC6-201ENST00000351948 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
SMC6-201ENST00000351948 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
SMC6-201ENST00000351948 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
SMC6-201ENST00000351948 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
SMC6-201ENST00000351948 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
SMC6-201ENST00000351948 FOXD4L5Q5VV16 416 aaPredicted RBP16.99■□□□□ 0.31
SMC6-201ENST00000351948 FOXD4L4Q8WXT5 416 aaPredicted RBP16.99■□□□□ 0.31
SMC6-201ENST00000351948 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
SMC6-201ENST00000351948 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
SMC6-201ENST00000351948 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
SMC6-201ENST00000351948 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
SMC6-201ENST00000351948 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
SMC6-201ENST00000351948 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
SMC6-201ENST00000351948 PDE4AP27815 886 aa16.98■□□□□ 0.31
SMC6-201ENST00000351948 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
SMC6-201ENST00000351948 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.97■□□□□ 0.31
SMC6-201ENST00000351948 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
SMC6-201ENST00000351948 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
SMC6-201ENST00000351948 CDK11BP21127 795 aaKnown RBP16.97■□□□□ 0.31
SMC6-201ENST00000351948 DISP1Q96F81 1524 aa16.96■□□□□ 0.31
SMC6-201ENST00000351948 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.31
SMC6-201ENST00000351948 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
SMC6-201ENST00000351948 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
SMC6-201ENST00000351948 A2MP01023 1474 aa16.96■□□□□ 0.31
SMC6-201ENST00000351948 NUP160Q12769 1436 aa16.96■□□□□ 0.3
SMC6-201ENST00000351948 SLC4A2P04920 1241 aa16.96■□□□□ 0.3
SMC6-201ENST00000351948 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.3
SMC6-201ENST00000351948 PHF8Q9UPP1 1060 aa16.96■□□□□ 0.3
SMC6-201ENST00000351948 G3BP1Q13283 466 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMC6-201ENST00000351948 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
SMC6-201ENST00000351948 TNRQ92752 1358 aa16.94■□□□□ 0.3
SMC6-201ENST00000351948 ADAMTS2O95450 1211 aa16.94■□□□□ 0.3
SMC6-201ENST00000351948 UBTFL1P0CB47 393 aaPredicted RBP16.94■□□□□ 0.3
SMC6-201ENST00000351948 HSPA2P54652 639 aa16.94■□□□□ 0.3
SMC6-201ENST00000351948 CABP4P57796 275 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 MCM10Q7L590 875 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
SMC6-201ENST00000351948 DISP3Q9P2K9 1392 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 MYL6BP14649 208 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
SMC6-201ENST00000351948 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
SMC6-201ENST00000351948 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
SMC6-201ENST00000351948 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms