RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PDCL3Q9H2J4 239 aa19.14■□□□□ 0.65
PTBP1-201ENST00000349038 MADDQ8WXG6 1647 aa19.13■□□□□ 0.65
PTBP1-201ENST00000349038 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
PTBP1-201ENST00000349038 UHRF1BP1LA0JNW5 1464 aa19.13■□□□□ 0.65
PTBP1-201ENST00000349038 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
PTBP1-201ENST00000349038 ASXL1Q8IXJ9 1541 aa19.12■□□□□ 0.65
PTBP1-201ENST00000349038 TTC37Q6PGP7 1564 aa19.12■□□□□ 0.65
PTBP1-201ENST00000349038 FSD2A1L4K1 749 aa19.12■□□□□ 0.65
PTBP1-201ENST00000349038 ARHGAP5Q13017 1502 aa19.11■□□□□ 0.65
PTBP1-201ENST00000349038 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
PTBP1-201ENST00000349038 NPC1L1Q9UHC9 1359 aa19.11■□□□□ 0.65
PTBP1-201ENST00000349038 PCDHB15Q9Y5E8 787 aa19.1■□□□□ 0.65
PTBP1-201ENST00000349038 FOXD4L5Q5VV16 416 aaPredicted RBP19.1■□□□□ 0.65
PTBP1-201ENST00000349038 FOXD4L4Q8WXT5 416 aaPredicted RBP19.1■□□□□ 0.65
PTBP1-201ENST00000349038 TBC1D32Q96NH3 1257 aa19.1■□□□□ 0.65
PTBP1-201ENST00000349038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.09■□□□□ 0.655e-7■■■□□ 14.7
PTBP1-201ENST00000349038 CENPJQ9HC77 1338 aaPredicted RBP19.09■□□□□ 0.65
PTBP1-201ENST00000349038 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
PTBP1-201ENST00000349038 DNTTIP2Q5QJE6 756 aaKnown RBP19.09■□□□□ 0.65
PTBP1-201ENST00000349038 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
PTBP1-201ENST00000349038 NASPP49321 788 aaPredicted RBP19.08■□□□□ 0.65
PTBP1-201ENST00000349038 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.65
PTBP1-201ENST00000349038 MYOM1P52179 1685 aa19.08■□□□□ 0.64
PTBP1-201ENST00000349038 SCAF11Q99590 1463 aaKnown RBP19.07■□□□□ 0.64
PTBP1-201ENST00000349038 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
PTBP1-201ENST00000349038 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
PTBP1-201ENST00000349038 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
PTBP1-201ENST00000349038 CDCA8Q53HL2 280 aa19.07■□□□□ 0.64
PTBP1-201ENST00000349038 TPM2P07951 284 aa19.06■□□□□ 0.64
PTBP1-201ENST00000349038 TNPO1Q92973 898 aaKnown RBP19.06■□□□□ 0.64
PTBP1-201ENST00000349038 VIRMAQ69YN4 1812 aaKnown RBP19.06■□□□□ 0.64
PTBP1-201ENST00000349038 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
PTBP1-201ENST00000349038 RLBP1P12271 317 aa19.05■□□□□ 0.64
PTBP1-201ENST00000349038 TSC1Q92574 1164 aa19.05■□□□□ 0.64
PTBP1-201ENST00000349038 FAM177BA6PVY3 158 aa19.05■□□□□ 0.64
PTBP1-201ENST00000349038 SPHKAPQ2M3C7 1700 aa19.04■□□□□ 0.64
PTBP1-201ENST00000349038 UQCRHLA0A096LP55 91 aa19.04■□□□□ 0.64
PTBP1-201ENST00000349038 DDX11L8A8MPP1 907 aa19.04■□□□□ 0.64
PTBP1-201ENST00000349038 UQCRHP07919 91 aa19.04■□□□□ 0.64
PTBP1-201ENST00000349038 FTSJ3Q8IY81 847 aaKnown RBP19.04■□□□□ 0.64
PTBP1-201ENST00000349038 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
PTBP1-201ENST00000349038 IGSF3O75054 1194 aa19.03■□□□□ 0.64
PTBP1-201ENST00000349038 E9PSI1 815 aa19.02■□□□□ 0.64
PTBP1-201ENST00000349038 FOXD4L6Q3SYB3 417 aaPredicted RBP19.02■□□□□ 0.64
PTBP1-201ENST00000349038 FOXD4L3Q6VB84 417 aaPredicted RBP19.02■□□□□ 0.64
PTBP1-201ENST00000349038 RNF214Q8ND24 703 aa19.02■□□□□ 0.64
PTBP1-201ENST00000349038 TRPM2O94759 1503 aa19.01■□□□□ 0.63
PTBP1-201ENST00000349038 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
PTBP1-201ENST00000349038 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
PTBP1-201ENST00000349038 RIPK4P57078 832 aa19■□□□□ 0.63
PTBP1-201ENST00000349038 STAC3Q96MF2 364 aa19■□□□□ 0.63
PTBP1-201ENST00000349038 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
PTBP1-201ENST00000349038 GBP4Q96PP9 640 aa18.99■□□□□ 0.63
PTBP1-201ENST00000349038 PTMAP06454 111 aaKnown RBP18.99■□□□□ 0.63
PTBP1-201ENST00000349038 CEP152O94986 1710 aa18.99■□□□□ 0.63
PTBP1-201ENST00000349038 NINLQ9Y2I6 1382 aa18.99■□□□□ 0.63
PTBP1-201ENST00000349038 NGEFQ8N5V2 710 aa18.99■□□□□ 0.63
PTBP1-201ENST00000349038 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
PTBP1-201ENST00000349038 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
PTBP1-201ENST00000349038 SSFA2P28290 1259 aa18.98■□□□□ 0.63
PTBP1-201ENST00000349038 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
PTBP1-201ENST00000349038 PTPRTO14522 1441 aa18.97■□□□□ 0.63
PTBP1-201ENST00000349038 CHAMP1Q96JM3 812 aa18.97■□□□□ 0.63
PTBP1-201ENST00000349038 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
PTBP1-201ENST00000349038 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
PTBP1-201ENST00000349038 MCTP1Q6DN14 999 aa18.97■□□□□ 0.63
PTBP1-201ENST00000349038 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
PTBP1-201ENST00000349038 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
PTBP1-201ENST00000349038 NLRP1Q9C000 1473 aa18.96■□□□□ 0.63
PTBP1-201ENST00000349038 PMFBP1Q8TBY8 1022 aa18.96■□□□□ 0.63
PTBP1-201ENST00000349038 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
PTBP1-201ENST00000349038 CLTCL1P53675 1640 aa18.96■□□□□ 0.62
PTBP1-201ENST00000349038 CBX1P83916 185 aa18.95■□□□□ 0.62
PTBP1-201ENST00000349038 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
PTBP1-201ENST00000349038 AAMPQ13685 434 aa18.95■□□□□ 0.62
PTBP1-201ENST00000349038 KIAA1210Q9ULL0 1709 aa18.95■□□□□ 0.62
PTBP1-201ENST00000349038 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
PTBP1-201ENST00000349038 GOLGA6L22H0YM25 854 aa18.94■□□□□ 0.62
PTBP1-201ENST00000349038 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.93■□□□□ 0.62
PTBP1-201ENST00000349038 DIP2BQ9P265 1576 aa18.92■□□□□ 0.62
PTBP1-201ENST00000349038 ABCC1P33527 1531 aa18.92■□□□□ 0.62
PTBP1-201ENST00000349038 CALD1Q05682 793 aaKnown RBP18.92■□□□□ 0.62
PTBP1-201ENST00000349038 PLCH2O75038 1416 aa18.92■□□□□ 0.62
PTBP1-201ENST00000349038 ERVK-7P63135 1459 aa18.92■□□□□ 0.62
PTBP1-201ENST00000349038 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTBP1-201ENST00000349038 RBM27Q9P2N5 1060 aaKnown RBP18.91■□□□□ 0.62
PTBP1-201ENST00000349038 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
PTBP1-201ENST00000349038 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
PTBP1-201ENST00000349038 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
PTBP1-201ENST00000349038 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
PTBP1-201ENST00000349038 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.62
PTBP1-201ENST00000349038 ZMYM3Q14202 1370 aa18.89■□□□□ 0.62
PTBP1-201ENST00000349038 NEURL4Q96JN8 1562 aa18.89■□□□□ 0.62
PTBP1-201ENST00000349038 WWC1Q8IX03 1113 aa18.89■□□□□ 0.61
PTBP1-201ENST00000349038 GLI2P10070 1586 aa18.89■□□□□ 0.61
PTBP1-201ENST00000349038 OFD1O75665 1012 aa18.89■□□□□ 0.61
PTBP1-201ENST00000349038 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
PTBP1-201ENST00000349038 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
PTBP1-201ENST00000349038 APBB1O00213 710 aa18.87■□□□□ 0.61
PTBP1-201ENST00000349038 SPDYE4A6NLX3 237 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms